Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi19g01156 | ATGGATTCTTCAACAATGCTGTACAACCAGCTCAAGTCATCAGAACCCTTTTTCTTGTTGGCTGGTCCCAATGTGATTGAATCTGAGGAGCACATTATGTATATGGCCAAAGCCATCAAGAGTCTCACATCAAAATTTGGGTTGAAGCTGGTTTTCAAGTCGAGCTTTGATAAAGCCAATCGAACCTCCTCAAAATCATTTCGGGGTCCTGGCATGATTGAAGGCCTGAAGATCCTTGAGAAGGTCAAAGTAGCATATGACATCCCCATAGTGACTGATGTACATGAAATTGAACAGTGTGAACCAGTTGGCAGAGTTGCAGACATCATTCAGATTCCAGCTTTCCTCTGTCGTCAGACAGATCTCCTAGTCGCTGCTGCCAAGACTGGAAAAATTATCAATATTAAGAAAGGCCAATTTTGTGCTCCCTCTGTCATGGTAAATTCTGCTGAAAAGATCAGATTGGCTGGGAATGAAAATGTGATGGTTTGTGAGAGGGGAACTATGTTTGGCTATAATGATCTGATTGTTGATCCACGCAACTTGGAGTGGATGAGGGAAGCTAATTGTCCTATTGTGGCAGATGTCACACATTCACTACAACAGCCTGCGGGGAGAAAACTGGAAGGCGGAGGTGTTGCCAGTGGAGGTCTTCGTGAATTGATACCATGCATTGCGAGGACAGCAGTTGCTGTTGGAGTGGATGGAATTTTCATGGAGGTGCACAATGATCCTCTAAATGCTCCAGTCGACGGTCCAACACAATGGCCTCTACGCCATTTGGAGGAACTGCTGGAAGAGCTTGTGGCAATAGCTAGGGTAAGCAAGGGGAAGCAACGCTTCAACATTGATCTCACACCAGTCCATGATTAA | 873 | 45.13 | MDSSTMLYNQLKSSEPFFLLAGPNVIESEEHIMYMAKAIKSLTSKFGLKLVFKSSFDKANRTSSKSFRGPGMIEGLKILEKVKVAYDIPIVTDVHEIEQCEPVGRVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCAPSVMVNSAEKIRLAGNENVMVCERGTMFGYNDLIVDPRNLEWMREANCPIVADVTHSLQQPAGRKLEGGGVASGGLRELIPCIARTAVAVGVDGIFMEVHNDPLNAPVDGPTQWPLRHLEELLEELVAIARVSKGKQRFNIDLTPVHD* | 291 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi19g01156 | 290 | Pfam | DAHP synthetase I family | 15 | 267 | IPR006218 | GO:0009058(InterPro) | |
| Vivi19g01156 | 290 | PANTHER | PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE | 1 | 289 | IPR006269 | GO:0005737(InterPro)|GO:0005829(PANTHER)|GO:0008676(PANTHER)|GO:0008676(InterPro)|GO:0046364(PANTHER) | |
| Vivi19g01156 | 290 | SUPERFAMILY | Aldolase | 12 | 277 | - | - | |
| Vivi19g01156 | 290 | NCBIfam | 3-deoxy-8-phosphooctulonate synthase | 16 | 276 | IPR006269 | GO:0005737(InterPro)|GO:0008676(InterPro) | |
| Vivi19g01156 | 290 | Gene3D | Aldolase class I | 5 | 284 | IPR013785 | - | |
| Vivi19g01156 | 290 | Hamap | 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. | 11 | 278 | IPR006269 | GO:0005737(InterPro)|GO:0008676(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi19g01156 | K01627 | 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] |