AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g01164 ATGGACACCGTCACCGAATCTGCCATGGCCGTGGCCATGGCCACTGTTGGCGGCGTCGGAATCATCCACTCCAACAACTCCGCTGCGGAGCAGGCGGCGTTGGTCCGTTCCGCCAAGTCGCGGCGTGTTCCTTTCGTGTCGGATCCAGTTGTGAAGTCCGCGTCTGATTGGGAGAAATTGAGCGATAAGGGACTCAGTTTTGTGCCGTTGGTAAGGGATGATGAAGTGGTGGATGTGGTGACCACGGCGGATGTGGAGAGAATTCGTGGTTTTCCGAAACTGGGGATGCCGTCGTTGGATGCAAAAGGCGAGTTCTTGGTGGGAGCGGCGATAGGGACGAGAGAGTCGGATAAGGAAAGGTTGGAGCATTTGGTGAAGGCAGGTGCCAATGTTATTGTATTGGATAGCTCACAAGGGAATTCAATTTATCAAATTGAGATGACCAAGTATGCCAAGAAAATGTTTCCGGAAGTTGATGTGATTGGTGGGAATGTGGTTACGATAAGACAAGCTCAAAACTTGATTCAGGCAGGGGTGGATGGGTTGAGAGTTGGGATGGGGTCTGGCTCCATTTGCACCACACAGGAGGTTTGTGCAGTGGGAAGAGGGCAGGCCACTGCTGTTTACAAGGTATCTTCTATTGCTGAGAGAAGTGGTGTGCCAGTCATTGCTGATGGTGGCATTTCAAACTCTGGGCATATCGTCAAGGCTTTGACTCTTGGAGCATCTACGGTGATGATGGGGAGCTTCTTGGCTGGAAGCAGTGAAGCTCCTGGGGCCTACGAGAATAAGAATGGTCTCAAGATTAAGAAATATAGAGGCATGGGATCCCTAGAAGCCATGACTAAAGGGAGTGATGCTCGATACTTGGGTGATACAGCTAAGCTGAAGATTGCCCAGGGTGTTGTTGGAGCAGTTGCAGACAAAGGTTCTGTTTTAAAGTTTATACCTTACACAATGCAAGCAGTTAAGCAAGGGTTCCAAGATCTTGGTGCGTCTTCTCTGCAATCTGCTCATGACCTGCTAAGATCAGAGTTAAGGCTTGAGGTCCGTACTGGAGCAGCGCAAGTTGAAGGTGGAGTTCATGGGCTGGTTTCTCATGAAAAGAAGTATTTTTGA 1119 49.78 MDTVTESAMAVAMATVGGVGIIHSNNSAAEQAALVRSAKSRRVPFVSDPVVKSASDWEKLSDKGLSFVPLVRDDEVVDVVTTADVERIRGFPKLGMPSLDAKGEFLVGAAIGTRESDKERLEHLVKAGANVIVLDSSQGNSIYQIEMTKYAKKMFPEVDVIGGNVVTIRQAQNLIQAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAERSGVPVIADGGISNSGHIVKALTLGASTVMMGSFLAGSSEAPGAYENKNGLKIKKYRGMGSLEAMTKGSDARYLGDTAKLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSLQSAHDLLRSELRLEVRTGAAQVEGGVHGLVSHEKKYF* 373
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g01164 372 Pfam IMP dehydrogenase - GMP reductase domain 1 362 IPR001093 GO:0003824(InterPro)
Vivi19g01164 372 ProSitePatterns IMP dehydrogenase - GMP reductase signature. 182 194 IPR015875 GO:0016491(InterPro)
Vivi19g01164 372 CDD IMPDH 1 347 IPR001093 GO:0003824(InterPro)
Vivi19g01164 372 Gene3D Aldolase class I 1 58 IPR013785 -
Vivi19g01164 372 SUPERFAMILY Inosine monophosphate dehydrogenase (IMPDH) 1 371 - -
Vivi19g01164 372 Gene3D Aldolase class I 59 372 IPR013785 -
Vivi19g01164 372 FunFam IMP dehydrogenase, putative 55 372 - -
Vivi19g01164 372 SMART IMPDH-2 1 362 - -
Vivi19g01164 372 PANTHER INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED 1 56 IPR005990 GO:0003938(InterPro)|GO:0003938(PANTHER)|GO:0005737(PANTHER)|GO:0006164(InterPro)|GO:0006183(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g01164 K00088 IMP dehydrogenase [EC:1.1.1.205]