Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi1g00002	ATGAGCTTTTCACAGGACATGGATGATGAGTATGAGAAACTTATTCGAAGAATGAACCCACCAAGGGTTGTAATTGATAATGAAACCTGCAAGAATGCTAGTGTGATACGGGTGGACAGTGCAAACAAACATGGAATACTTCTCGAAGTTGTACAAGTCCTTATTGATCTTAACCTTATTATAACTAAAGCTTATATATCTTCTGATGGTGGATGGTTCATGGATGTCTTTAATGTTACTGATCAAGATGGAAACAAGATTACAGATGAAGAGATTTTAGATTATATCCAAAAGTCACTGGGTTCGGATGCATGCTTCATATCTTCAATGAGAAGATCTGTTGGTGTTATACCTTCCACAGACCACACTTCAATTGAGTTGACTGGAAGTGACAGGCCAGGACTACTTTCAGAGGTGAGTGCTGTCCTAACCCACCTAAAATGCAGTGTGGTGAATGCTGAGGTTTGGACCCACAACACCCGGGCTGCAGCCGTGATGCACGTAACGGATGAGGAAACTGGCTGTGCTATTACTGACCCTGAAAGACTCTCTAAGGTCAAGCAACTTCTGTGCAATGTACTTAAGGGCAGCAATAAATCAAGGGAAGCTAAGACTCTTCTCTTTGATACTGTTTGCACTTTGACTGACATGCAATATGTGGTTTTCCATGCAAATGTTGATGCTGAGGGGCCTGAAGCTTATCAGGAATACTATATCAGGCATATAGATGGGTCTCCTGTGAAATCAGATGCGGAGAGACAGAGAGTGATTCAATGTCTTGAAGCAGCCATTGAGAGAAGAGTATCTGAGGGATTGAAGCTTGAATTGTGCACTACGGACAGAGTTGGGCTGCTATCTGATGTCACTCGCATCTTCCGTGAGAATAGCCTCTCAGTCACCAGGGCTGAAGTTACAACTAGAGCAGGCAAAGCTGTTAATACATTCCATGTTCGTGATGCATCCGGTTATCCTGTTGATGCTAAGACTATTGATTCCATCCGGGAAGCAATTGGCCAGACTATCCTCCAAGTGAAAGGCAGCCCTGAAGAGATAAAACAAATTCCTCAAGAATCTCCAACCAGATTCCTCCTTGTGGGTCTCTTCAGAGTGAATCCTACCTTTGTACATAGTAATCATGCAGTTTCATCAAATTCTTTTGCTATCATCATATCTCCTACACTATTTTTCGTTATACTTCTATGA	1203	42.23	MSFSQDMDDEYEKLIRRMNPPRVVIDNETCKNASVIRVDSANKHGILLEVVQVLIDLNLIITKAYISSDGGWFMDVFNVTDQDGNKITDEEILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIELTGSDRPGLLSEVSAVLTHLKCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKVKQLLCNVLKGSNKSREAKTLLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRHIDGSPVKSDAERQRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLSVTRAEVTTRAGKAVNTFHVRDASGYPVDAKTIDSIREAIGQTILQVKGSPEEIKQIPQESPTRFLLVGLFRVNPTFVHSNHAVSSNSFAIIISPTLFFVILL*	401

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi1g00002	400	ProSiteProfiles	ACT domain profile.	35	112	IPR002912	-
	Vivi1g00002	400	CDD	ACT-ACR-1	33	104	-	-
	Vivi1g00002	400	CDD	ACT-ACR-2	123	196	-	-
	Vivi1g00002	400	Gene3D	-	272	346	-	-
	Vivi1g00002	400	Gene3D	-	122	195	-	-
	Vivi1g00002	400	SUPERFAMILY	ACT-like	269	339	IPR045865	-
	Vivi1g00002	400	CDD	ACT-ACR-3	199	267	-	-
	Vivi1g00002	400	PANTHER	ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED	10	198	IPR040217	-
	Vivi1g00002	400	Pfam	ACT domain	35	93	IPR002912	-
	Vivi1g00002	400	Pfam	ACT domain	278	333	IPR002912	-
	Vivi1g00002	400	Pfam	ACT domain	123	172	IPR002912	-
	Vivi1g00002	400	ProSiteProfiles	ACT domain profile.	124	211	IPR002912	-
	Vivi1g00002	400	SUPERFAMILY	ACT-like	30	98	IPR045865	-
	Vivi1g00002	400	ProSiteProfiles	ACT domain profile.	273	353	IPR002912	-
	Vivi1g00002	400	SUPERFAMILY	ACT-like	119	194	IPR045865	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi1g00002	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	5452940	Vivi	Vivi17g00073	Vivi-Chr17:723570	Vivi1g00002	Vivi-Chr1:32355
	5455241	Vivi	Vivi1g00002	Vivi-Chr1:32355	Vivi1g01301	Vivi-Chr1:21888059
	5465870	Vivi	Vivi1g00002	Vivi-Chr1:32355	Vivi14g01142	Vivi-Chr14:25369234