AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00004 ATGACAGGAGAAGGGAATTCAGGACATGGTGATAATTTCCATAATGTTATTATCATAGATGGTCCAAAGTCTGTACAACAGAATGTACAAGATTCTGGTGTAATGAGAAGAGACAAAAGGGTTCCATTGGAAAGCATTATTAGTATTGATGATGATGAAAGCACGGACATCCATCCTGAAAATGGTGCGGAAAGTCGTGGTGACTTGGATAGTGATGCCAGCTCAAGCAAGAGATCTTGTCCTGCTTCCAACCATTCACAAAATTCTGTGGGCTTAGAAGCTGAGGAATGTCAATTCATCCGAGAAAGAAAATCCCCAGTGAAGTTGTCAAAATGTAAGCGAACCTATTCTGGGAAAGCTCCCTCCAGAAACCGTTATGGTTTAGATCCCATGCCTGAAAGTACTTCGCCTGAAAGTACTTCATCTGAAAGTGGTTTATCTGATTGTGAGCTTATGGAAGGTTCTAGGGGAAAGCTTCATGAACAGTGGGAACAAGCTTACTTAAAGAGAAAAGATGTCCCTCAAACTGCCAAATCTGATTTGGGGGATCAGCCTAGTGCCTCTGGTTCTAACACTGATACTCCCCCAAATATTGAAGTAGAAAACATGACTGAACAACATCAAGAAACCCCAGTATGTTCTAGTTCAAGCAATGAAAATTTTGAAAAAGAAAACCTACCTTCCTTTTTTGCTCCTGATGGCAGCAATTTGGGTGCTACTTCTCCAAATCCTGAAGTTGAGAATCCCTTTGCAGAATTTGAATTTAAATTTGATGAGGAGAGTTCAAGGTGTAAAATTGAGTCAATGGAAAAAACACAATTTTCTGATGTCAACAATGATGTTCAAGATGAAGAAGCTTCGTTCTGCAAGAGCCACAGTTCGGTGGAAACACAGGTTAATCTAGTTGCTTCGAGTGAAAAAGATGAAGGGCTCCATGAGGTACCTAATGGGTCTCATTTTCCAAATGAATCAAAATATGGAGGAACTATTTTCAAGGGAAAAAAGAAATCAGTTTCTAGAGAACAGTCATTTTGGAAACCTCAACCATCTGATGAAACATGGATTAATTGTGGTGTAGCACCCTTCAAGGACAAAGTTCAAGTTGTTCCTGAAAAAGCTTTCTTCTGTACCTCTCTATTGGCAGAAAAGTTGGATGTTAGTAATGAAAAAGGTTCTTGTCTGGAAAGAAAGAAACCAGTTTCTGGGGAACCTTCTTCATGCCATGCTCCACCTAATGAAACACAAATTAAAAAGAGCAAATCTTGTTTGATGAGGAAGGAACTAATTGCTGAATCTATGCCTGTCAGTGAACAAGATAATAAAATTGATGATATAACACATGCTCAAAATGGTCAAAGAGATATAATCAATGAGCGAGAGAAGCTCAAGGAGACTGAGGAGTACAAGCGAGCGATAGAAGAAGAATGGACATCCAGGCAGAGGCAGTTACAGTTACAGGCAGAAGAAGTGCAGCGGTTGAAGAAGAGAAGAAAAGCCGAAAATACACGTTTATTGGACATGGAGAGAAGACAAAAGCAGCGTGTCCAAGAAATGAGAGAGACACAAAAAAAGGATGAAGAGAATATGAACATGAAAGAGAAAATTCGTCTTGAAGTACGGAAAGAACTTGATAAATTGGAAATGACATGTAGTGATATGGCCTCATTACTTCGTGGCCTAGAAATCCATGTGGGAGGTGGTTTCTGTCCCTCATCAAATGAGGTCCATGCAGCTTATAAACGAGCCTTGTTAAAATTTCACCCAGACCGAGCATCTAGAACTGACATCTATCATCAGGTGGAGGCTGAGGAAAAATTTAAGCTTATTTCTCGCATGAAAGAAAAGTTTTTATTGCCTTCATGA 1863 39.67 MTGEGNSGHGDNFHNVIIIDGPKSVQQNVQDSGVMRRDKRVPLESIISIDDDESTDIHPENGAESRGDLDSDASSSKRSCPASNHSQNSVGLEAEECQFIRERKSPVKLSKCKRTYSGKAPSRNRYGLDPMPESTSPESTSSESGLSDCELMEGSRGKLHEQWEQAYLKRKDVPQTAKSDLGDQPSASGSNTDTPPNIEVENMTEQHQETPVCSSSSNENFEKENLPSFFAPDGSNLGATSPNPEVENPFAEFEFKFDEESSRCKIESMEKTQFSDVNNDVQDEEASFCKSHSSVETQVNLVASSEKDEGLHEVPNGSHFPNESKYGGTIFKGKKKSVSREQSFWKPQPSDETWINCGVAPFKDKVQVVPEKAFFCTSLLAEKLDVSNEKGSCLERKKPVSGEPSSCHAPPNETQIKKSKSCLMRKELIAESMPVSEQDNKIDDITHAQNGQRDIINEREKLKETEEYKRAIEEEWTSRQRQLQLQAEEVQRLKKRRKAENTRLLDMERRQKQRVQEMRETQKKDEENMNMKEKIRLEVRKELDKLEMTCSDMASLLRGLEIHVGGGFCPSSNEVHAAYKRALLKFHPDRASRTDIYHQVEAEEKFKLISRMKEKFLLPS* 621
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00004 620 MobiDBLite consensus disorder prediction 1 92 - -
Vivi1g00004 620 MobiDBLite consensus disorder prediction 153 177 - -
Vivi1g00004 620 MobiDBLite consensus disorder prediction 304 327 - -
Vivi1g00004 620 SUPERFAMILY Chaperone J-domain 513 612 IPR036869 -
Vivi1g00004 620 MobiDBLite consensus disorder prediction 395 419 - -
Vivi1g00004 620 MobiDBLite consensus disorder prediction 74 92 - -
Vivi1g00004 620 MobiDBLite consensus disorder prediction 133 148 - -
Vivi1g00004 620 Coils Coil 483 525 - -
Vivi1g00004 620 Coils Coil 455 475 - -
Vivi1g00004 620 MobiDBLite consensus disorder prediction 33 73 - -
Vivi1g00004 620 CDD DnaJ 571 610 IPR001623 -
Vivi1g00004 620 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 11 618 - -
Vivi1g00004 620 Gene3D DnaJ domain 570 616 IPR036869 -
Vivi1g00004 620 MobiDBLite consensus disorder prediction 110 250 - -
Vivi1g00004 620 MobiDBLite consensus disorder prediction 179 224 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00004 - -