AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00005 ATGAAGCTCAAAGCCCCCCAATCGAACCCTTTCGAGACCATTTGGTCTCGGACCAAGTTCGACATACTTGGCAAGAAGCGTAAAGGCGAACAAAAGCGTATCGGCTTGGCTCGATCTCGCGCCATCCAAAAGAGGAACGCCACACTGTTGAAGGAGTATGAACAAAGCGCCAAGTCTTCGGTTTTTCTTGATAAGAGAATTGGGGAGCAAAACGATGCGCTTGGGGAGTTCGATAAGGCGATTTTGCGGTCACAGCGTGAGCGTCAGTTGAAACTGAAGAAGAAAAGCAAATATAATTTATCTGATGGAGAAGAAGATGAATTTGAAATTGAAGGAGTTCCTTCATTTTCAGAAAGGGATGATTTTGAAGATGAAATGGTGCCCGACGATGATGATGATGATGGTGCAGAAGGAGCTGGAACTGAGAAAAAGCCAACGTTGTTGAAACAGGTTAACGCCCATGATATGCAGAATCAGTCACAAAGGGGTCTGATGGAGGGAGAGGAAAATAAACACAAAAGCAAAAAGGAAGTGATGGAGGAGATTATTTCAAAGAGCAAGTTTTACAAGGCCCAAAAAGCAAAAGATAGGGAAGAAAATGAACATTTGGTGGAAGAATTGGATAAGAACTTCACATCCTTAGTTCAGTCTGAGGCATTATTATCTTTGACTCGACCAGACAAAGTGAATGCTTTAAAGGCTCTTGTAAACAAGAGCATTCCAAATGAATATATGAAGAAAGATGATGTATCCGCTATGCAGCACATAAAATCTTTTAAGCAGGAACAACCTGATTCCTACGACAAAATTATAGGTGAGATGACATTGGATATGCGTGCTCGTCCATCAGACAGGACAAAAACGCCTGAAGAGATTGCCCAAGAGGAGAGAGAACGACTAGAGCGACTGGAGGAAGAGCGTCAGAAGAGAATGCTTGCTCCTAATGATTCCAGTGATGAAGAAGGTGATTCACGTGAAGATGCTGTTGAAGCATCTAACCAGAGGCTAAGATCTATTTCTGGGGATGATCTTGGTGATTCCTTCTCTCTTGATGTGCTGCCAGAGTCTAAGAAGGGCTGGGTTTATGAGGTTCTTGACAGAAAGGATACAAATGAGCTTGAAACGGAAGATTATGGATCTTCCGAGGAATCAGAAAGTCCTGAGAATGAGAGTGATGATGAAGGTTTTGAAAAAGATAATGATAATTGCGAAATGACTTCTTCCTTGAAGGACTGGGAACAGAGTGATGACGACAAACTTAGTACAGATTTGGAAGATAGTGGTAATGCAGAAATCAATAGAAACAATATTGATTCATTAGATGCCAAGAAAATAAAAACAAATGTTAAACATCCTTCGTCTCAACAAGATTCCATTCCTTACGTGATTAAAGCTCCAACCAGTTTGGAAGAATTGTTCATGTTGTTGGAGAATTGTTCTGATTCTGACATTGTTGAGATAATTCATCGAATTCGTATAAACAATGCAATCAGTCTTGCAGTAGAGAATCGGAAGAAAATGCAAGTATTTTATGGTGTATTATTGCAATATTTTGCTGTCTTGGCAAATAAAAAGCCATTAAATTTCAAGCTATTGAATTTGCTGGTCAAGCCATTAATGGAGATAAGTGTGGAGATCCCATACTTTGCAGCAATATGTGCTCGTCAACGGATATTACGGACTAGAATGCAATTCTGTGAGGCAATTAAAATCCCAGAGAAGAGTAGTTGGCCTTCTTTGAAAACATTATTTCTCCTGAGACTCTGGTCGATGATATTTCCATGCTCTGACTTTCGTCATGTTGTCATGACCCCAGCTACACTGTTGATGTGTGAATATCTGATGCGTTGTCCTATTTTATCTGGTTATGATATTGCCATTGGTTGTTTCTTGTGCTCCATGGTTCTCTCGGTTGTTAAACAATCTCGGAAGTTCTGTCCTGAAGCCATAATGTTTCTCCAAACTTTGTTAATGGTTGCTTTGGATGGAAACTCAAAATTATCTCAGGATTCTCAGTTTTATTTTTTCATGGAACTTAAAACGCTCAAGCCCCTGTTGGCAATACGAGGACATGTAGATGATCTTAGTCCTCTGGATTTCCTCACACTCATGGCCATGCCAGAGGGCTCTTCGTTTTTCAGCTCAGATAATTTCAGGGCTTGTGTGCTGGTATCCATCATTGAAACTCTACAAGGATTTGTTGATATTTATGGAGGATACAATTCATTTCCTGAAATTTTCTTGCCAATATCAACATTGTTACTTGCATTGGCAGAACAGGAAAACATGCCCAATGCATTGAAGGAGAAAATTAGAGGTGTTGAAGTGCTTATTAAGGAGAAAACTCATGAACACCATATGCTGCGTCAACCACTTCAAATGCGGAAACAAAAGCCAGTGCCTATCAAATTATTCAATCCAAAATTTGAGGAGAACTTTGTTAAGGGTAGAGACTATGATCCAGATCGTGAACGGGCTGAGCAGAGAAAATTGAAGAAACTTATAAAACAGGAGGCTAAGGGGGCAGCTCGTGAACTACGTAAAGATAATTATTTCTTATTTGAGGTAAAGAAAAGGGATAAGGCAATGCAGGAAGAAGAAAGAGCAGAGAAGTATGGGAAGGCAAGGGCATTTCTCCAAGAACAAGAACATGCTTTCAAATCTGGACAATTGGGAAAAGGCAGGAAGAGAAGGAGATGA 2700 40.22 MKLKAPQSNPFETIWSRTKFDILGKKRKGEQKRIGLARSRAIQKRNATLLKEYEQSAKSSVFLDKRIGEQNDALGEFDKAILRSQRERQLKLKKKSKYNLSDGEEDEFEIEGVPSFSERDDFEDEMVPDDDDDDGAEGAGTEKKPTLLKQVNAHDMQNQSQRGLMEGEENKHKSKKEVMEEIISKSKFYKAQKAKDREENEHLVEELDKNFTSLVQSEALLSLTRPDKVNALKALVNKSIPNEYMKKDDVSAMQHIKSFKQEQPDSYDKIIGEMTLDMRARPSDRTKTPEEIAQEERERLERLEEERQKRMLAPNDSSDEEGDSREDAVEASNQRLRSISGDDLGDSFSLDVLPESKKGWVYEVLDRKDTNELETEDYGSSEESESPENESDDEGFEKDNDNCEMTSSLKDWEQSDDDKLSTDLEDSGNAEINRNNIDSLDAKKIKTNVKHPSSQQDSIPYVIKAPTSLEELFMLLENCSDSDIVEIIHRIRINNAISLAVENRKKMQVFYGVLLQYFAVLANKKPLNFKLLNLLVKPLMEISVEIPYFAAICARQRILRTRMQFCEAIKIPEKSSWPSLKTLFLLRLWSMIFPCSDFRHVVMTPATLLMCEYLMRCPILSGYDIAIGCFLCSMVLSVVKQSRKFCPEAIMFLQTLLMVALDGNSKLSQDSQFYFFMELKTLKPLLAIRGHVDDLSPLDFLTLMAMPEGSSFFSSDNFRACVLVSIIETLQGFVDIYGGYNSFPEIFLPISTLLLALAEQENMPNALKEKIRGVEVLIKEKTHEHHMLRQPLQMRKQKPVPIKLFNPKFEENFVKGRDYDPDRERAEQRKLKKLIKQEAKGAARELRKDNYFLFEVKKRDKAMQEEERAEKYGKARAFLQEQEHAFKSGQLGKGRKRRR* 900
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00005 899 MobiDBLite consensus disorder prediction 89 176 - -
Vivi1g00005 899 MobiDBLite consensus disorder prediction 400 425 - -
Vivi1g00005 899 MobiDBLite consensus disorder prediction 274 319 - -
Vivi1g00005 899 Coils Coil 862 882 - -
Vivi1g00005 899 Coils Coil 290 313 - -
Vivi1g00005 899 MobiDBLite consensus disorder prediction 122 136 - -
Vivi1g00005 899 MobiDBLite consensus disorder prediction 274 350 - -
Vivi1g00005 899 Pfam Nop14-like family 7 884 IPR007276 GO:0032040(InterPro)
Vivi1g00005 899 PANTHER NOP14 5 898 IPR007276 GO:0005730(PANTHER)|GO:0030490(PANTHER)|GO:0030692(PANTHER)|GO:0032040(PANTHER)|GO:0032040(InterPro)
Vivi1g00005 899 MobiDBLite consensus disorder prediction 376 399 - -
Vivi1g00005 899 MobiDBLite consensus disorder prediction 371 435 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00005 K14766 nucleolar protein 14