AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi1g00014 | ATGGTCTCCAAGAAGAAGTACATCTTTACCATCGACGACGATTGCTTCGTTGCCAAAGACCCATCTGGCAAAGATATCAATGCGCTTGAGCAGCACATAAAGAACCTCCTCACTCCATCAACTCCATTTTTCTTTAACACTCTTTATGATCCATACAGAGATGGTGCAGACTTTGTCCGTGGGTATCCTTTCAGTCTCCGTGAGGGTGTTCCCACTGCTGTTTCTCATGGTCTCTGGCTCAACATCCCTGATTATGATGCTCCCACCCAGCTTGTCAAACCCCGTGAGCGAAACACCAGGTATGTAGATGCTGTTTTGACAGTTCCAAAGGGTACCTTGTTCCCCATGTGTGGTATGAATCTGGCATTCAACCGTGAACTGATTGGACCTGCAATGTACTTTGGACTCATGGGTGATGGTCAGCCAATTGGCCGTTATGATGATATGTGGGCTGGCTGGTGCATGAAGGTGATATGTGACCATTTGGGATGGGGTGTCAAGACTGGTCTGCCCTACATATGGCACAGCAAAGCAAGCAATCCATTTGTTAACCTCAAAAAGGAGTACAGTGGCATCTACTGGCAAGAAGAGCTGATCCCATTCTTCCAAGCCGCAACACTTCCAAAGGAATGCACCACTGTTCAACAATGCTACCTTGAACTCTCCAAACAGGTCAAGGCTAAGCTTGAGAAGGTTGATCCATACTTCGTTAAGCTAGCAGATGCCATGATCACATGGATCGAAGCTTGGGATGAGCTCAACCCATCTGCTGGAGATTCTGCTAACCTGACCAACGGTTCTGCCAAGTAG | 810 | 47.41 | MVSKKKYIFTIDDDCFVAKDPSGKDINALEQHIKNLLTPSTPFFFNTLYDPYRDGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVLTVPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVICDHLGWGVKTGLPYIWHSKASNPFVNLKKEYSGIYWQEELIPFFQAATLPKECTTVQQCYLELSKQVKAKLEKVDPYFVKLADAMITWIEAWDELNPSAGDSANLTNGSAK* | 270 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi1g00014 | 269 | Pfam | Reversibly glycosylated polypeptide | 1 | 254 | IPR037595 | - | |
| Vivi1g00014 | 269 | PANTHER | UDP-ARABINOSE MUTASE | 1 | 255 | IPR037595 | GO:0005794(PANTHER)|GO:0005829(PANTHER)|GO:0009832(PANTHER)|GO:0033356(PANTHER)|GO:0052691(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi1g00014 | K13379 | reversibly glycosylated polypeptide / UDP-arabinopyranose mutase [EC:2.4.1.- 5.4.99.30] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr17:928686 | Vivi1g00014 | Vivi-Chr1:258817 | dispersed | |
| Vivi | Vivi-Chr1:258817 | Vivi14g01000 | Vivi-Chr14:23425743 | wgd | |
| Vivi | Vivi-Chr1:258817 | Vivi17g00442 | Vivi-Chr17:5513955 | wgd |