Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi1g00022 | ATGGCTCATTCCTGTGTTCACAAAGATAGAGGGGAGTTGAGGATTTATGAAAATTTGAATGAGCTCAGCACCGATTTAGCCGACTATATCGCTGAATTATCAGAGGTCTCGGTGAAAGAGCGAGGTGTCTTTGCCATTGCTTTATCTGGTGGTTCTCTCATTGACTTGATGGGAAAACTGTATGAAGCTCCTTACAACAAGACTGTTGACTGGGCTAAATGGTATATATTTTGGGCGGATGAGCGTGTGGTGGCAAAGAACCATTCTGATAGCAATTATAAGTTAGCAAAAGATGGCCTATTGTCCAAGGTGCCTGTTGTTCCCAGCCATGTACATTCTATCAATGATACGGTGACAGCAGAGGAAGCTGCTGATGAGTATGGGTTTGCCATACGACAGCTAGTGAAGACCCGCGTCATCAGCGTATCTGATACCAGTGATTGCCCCAAGTTTGATCTCATCCTTCTTGGAATGGGCTCTGATGGACATGTTGCCTCGCTGTTCCCTAATCATTCTGTGCTCGAGGAGAAGGATGAATGGGTAACTTTTATAACTGATTCTCCCAAGCCTCCACCGGAGAGGATTACTTTCACACTGCCCGTCATCAACTCAGCGTCCAATGTGGCTGTGGTCATCACAGGTGGCAACAAAGCAGAGGCCGTACACTTGGCAATTGATGATGTGGGACCTGACTGCCCATCACTGCCTGCGCGGATGGTCCAGCCAACTAAGGGGAAGTTGGTGTGGTTTATTGACAAGCCGGCTGCCCTGAAACTTGATTGCTGTCAATTCTCTGAATAG | 801 | 47.19 | MAHSCVHKDRGELRIYENLNELSTDLADYIAELSEVSVKERGVFAIALSGGSLIDLMGKLYEAPYNKTVDWAKWYIFWADERVVAKNHSDSNYKLAKDGLLSKVPVVPSHVHSINDTVTAEEAADEYGFAIRQLVKTRVISVSDTSDCPKFDLILLGMGSDGHVASLFPNHSVLEEKDEWVTFITDSPKPPPERITFTLPVINSASNVAVVITGGNKAEAVHLAIDDVGPDCPSLPARMVQPTKGKLVWFIDKPAALKLDCCQFSE* | 267 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi1g00022 | 266 | FunFam | Probable 6-phosphogluconolactonase | 8 | 260 | - | - | |
| Vivi1g00022 | 266 | SUPERFAMILY | NagB-RpiA-CoA transferase-like | 13 | 261 | IPR037171 | - | |
| Vivi1g00022 | 266 | PANTHER | 6-PHOSPHOGLUCONOLACTONASE | 2 | 259 | IPR039104 | - | |
| Vivi1g00022 | 266 | Gene3D | - | 9 | 261 | - | - | |
| Vivi1g00022 | 266 | Pfam | Glucosamine-6-phosphate isomerases-6-phosphogluconolactonase | 20 | 249 | IPR006148 | GO:0005975(InterPro) | |
| Vivi1g00022 | 266 | CDD | 6PGL | 21 | 251 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Vivi1g00022 | 266 | NCBIfam | 6-phosphogluconolactonase | 15 | 258 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi1g00022 | K01057 | 6-phosphogluconolactonase [EC:3.1.1.31] |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 5452871 | Vivi | Vivi16g00989 | Vivi-Chr16:21450859 | Vivi1g00022 | Vivi-Chr1:312339 |