Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi1g00028 | ATGGGTCGAGGAGTCAGCAGTGGTGGAGGACAGAGTTCATTGGGCTACCTTTTTGGGAGTGGAGAGGCTCCCAAACCGGCGCCAAACAATGCCCCAGCTTCTTCTAGCGAAGGACCAGCTGCTAATACTGGGGCTTCCACCAAGCCCATTGCTGCAGCTCAACCAACAGATGTTACTAAGCAGATACCTGCAGGTATCAATAGTAACACTGCAAACAACTACCACCGGGCGGATGGCCAGAACTGTGGCAACTTCATCACAGGTCGTCCCTCAACTAAGGTCCACTCTGCACCTGGTGGTGGATCATCTTTGGATTACCTCTTTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGCTAGTGGTGGTGGTGCTAGTGGTGGTGGTGGTAAATGA | 396 | 54.04 | MGRGVSSGGGQSSLGYLFGSGEAPKPAPNNAPASSSEGPAANTGASTKPIAAAQPTDVTKQIPAGINSNTANNYHRADGQNCGNFITGRPSTKVHSAPGGGSSLDYLFGGGGGGGGGGGASGGGASGGGGK* | 132 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi1g00028 | 131 | PANTHER | SPR1 | 1 | 109 | IPR039613 | GO:0010005(PANTHER)|GO:0043622(PANTHER)|GO:0043622(InterPro) | |
| Vivi1g00028 | 131 | MobiDBLite | consensus disorder prediction | 29 | 75 | - | - | |
| Vivi1g00028 | 131 | MobiDBLite | consensus disorder prediction | 109 | 131 | - | - | |
| Vivi1g00028 | 131 | MobiDBLite | consensus disorder prediction | 1 | 75 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi1g00028 | K18635 | protein SPIRAL1 and related proteins |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 5455256 | Vivi | Vivi1g00028 | Vivi-Chr1:390750 | Vivi2g00030 | Vivi-Chr2:371214 | |
| 5465176 | Vivi | Vivi16g00927 | Vivi-Chr16:20998715 | Vivi1g00028 | Vivi-Chr1:390750 | |
| 5465983 | Vivi | Vivi1g00625 | Vivi-Chr1:7171468 | Vivi1g00028 | Vivi-Chr1:390750 | |
| 5467984 | Vivi | Vivi1g00028 | Vivi-Chr1:390750 | Vivi14g01022 | Vivi-Chr14:23946686 | |
| 5468117 | Vivi | Vivi1g00028 | Vivi-Chr1:390750 | Vivi17g00455 | Vivi-Chr17:5652105 |