AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00035 ATGCCTTCCATCACTATTTGTCCACACAACCCTCACTTCCCCAACATTTTCCATTTCATTTTCTTCCTCCATTTTCGCACATTCTCAATAACCAATTTAAAAATCAATTCAAAAGCTAAATTTAAAACCAAAATTCTTGCGATCTTTTTGAGCCAATCCACGTTTCAATTTTATCAGATTGGGGCGGGGAAAAAGGGGGAGCTGGGAATCGCCGGTGCCGCTTCCGGCAGGTGGATTTTAGCGGCTGGAATTGGGGCCTCTTTCGGGGATAGAAGGCCTGGTCTGGGATTCAGCCTGGATTCCATCAATATCTTCAGCTATGATAAGGATGCGCAACTAGAACTAAAAGATGAAAATGATACAGGGTTTCCTGGTCCTGCATCACCATCACAGGTTTCTGATCTCAGACAAGAGACTTCATTTCACTGCATGTCACCCACGCAATCCCCCCCAGTCCAATCGATGGAAAGGTCAGGAGATGATGAACCGTATAGGATTCCATCTTCTGTGTTTGCCAGAAGTCAATCAACAACTCCATTGGAATGGAGTGTTGCTTCCAACGAGTCACTGTTCAGCATCCATGTAGGGAACAGTAGTTTCTCCAGAGAGCATATTTTCATGTTGGGTGGAGATCATACCAAGTCTGGAGAACTAACCAAGTCTGGAGAGTTGATTGTGTTCAGCTCGTCTCCACCAGCTCGGTTAGGGGATAATGTCAGTAAGATGCCACCAACTTCAGCTGATCAAAATGTTGAAAAGATAGCTCGACCAGAGGTGCCTTTTAATTCTAGCAGCGTGCGCCGTTCTGATGCGAGTGCAACCAGCTCACGCTCTTTTGCATTTCCAATTTTGACAGAAGAGGAAAGAAATGTTTCAATCAAGGAGCAACCTGAGAAACAGCTTTCACAGAAGCAACTGCAACCGAGAGCCACTGAAGCGACTTCAAGTGATGCTGCTAGCAGCATTTGGTTGAGTTGTGCTTGTTGTCCATACAAATGCTGTTGA 1005 45.17 MPSITICPHNPHFPNIFHFIFFLHFRTFSITNLKINSKAKFKTKILAIFLSQSTFQFYQIGAGKKGELGIAGAASGRWILAAGIGASFGDRRPGLGFSLDSINIFSYDKDAQLELKDENDTGFPGPASPSQVSDLRQETSFHCMSPTQSPPVQSMERSGDDEPYRIPSSVFARSQSTTPLEWSVASNESLFSIHVGNSSFSREHIFMLGGDHTKSGELTKSGELIVFSSSPPARLGDNVSKMPPTSADQNVEKIARPEVPFNSSSVRRSDASATSSRSFAFPILTEEERNVSIKEQPEKQLSQKQLQPRATEATSSDAASSIWLSCACCPYKCC* 335
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00035 334 PANTHER SUPPRESSOR SRP40-LIKE PROTEIN 116 334 - -
Vivi1g00035 334 MobiDBLite consensus disorder prediction 296 314 - -
Vivi1g00035 334 MobiDBLite consensus disorder prediction 124 155 - -
Vivi1g00035 334 MobiDBLite consensus disorder prediction 290 314 - -
Vivi1g00035 334 MobiDBLite consensus disorder prediction 116 162 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00035 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5468223 Vivi Vivi1g00035 Vivi-Chr1:448024 Vivi17g00666 Vivi-Chr17:8375783