AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00037 ATGGATTTGTGGGTTGTTGCAGCAGCTGCTGGTGCTGGGTATTTGGCCAAGTACTGGCAGAACTTTTCAAACGAAAAGGAAGGGTCACTATCATTATCTGGGGAGTCTAAACCCCGTAATTTGCTGCAACAAATACAAGAGCGGAATGGCCCGTTTCGGAGATTGAGGCAGAAACAATTAGGCATAGATGATATTTTAGGTAGTGAAAACTTGGGAGAGATTGGTGATTTGGCTACAGGAGTAGCTTCTACTAATGATTTTGATGGGAAGGGAAAGGCCGAGTTTTCTGGCAATTCTGATAATTTAACAGATGTCCTTACGACCCAAGAGACCAGATTTAAGCGACACAAGGCTTTTAGAAGTAGAAGGCCTCTTGAGTATTCTATTAAGCCACTGGATTCATTAGAAAGTTGTGTCGCTTCTCAGCTGTATAGGGAGCATGAAAATATGAATGAGTACGAATTCAGCTCACTGCCATCTCCATATACTCCTACAGTGAGACCGTTGTTGGCGACTGATGGCAGCCGAGTAATCAGCAGAGTTGGTGGTGGTTCTTTTAGAGCAGAGTTGCAGTTTGAAAGTGAGAAAAAGAAGCTTCATAAGGGAGATGGCACGCACTTGGAGGAAAATGAGACACTTTTGGGGCTTCCACCACTACCAAGTATTGGATCATTGCAGCTCCCTTGGAAATTGAAACAAAATGTCAGAAAGGGGAGGGTTCAAAGATCGAGCAGTCCTGGTATAAGAGCATCTAGTGAAGCATTCCATTCACAAGGATCACCCAACGGGATGTTTCTTTTCTTTCTTGGAATCACTATTGGTGTAATGGCCACTTTGGTTGCCAGTAAGAGAGAAGTGGACAAATTAAATGAGCAGTTAAAGCAGACTGAGAACTTGGTTGAGGATTTACATGAGGAGCTTGAAATGAAAGATTTTCTCACTGTCAAAGATCTCACAAATGAGGAGCCGGACAATCAGAATACAGAGAACTCTGAATTGATTAGTAAAATTGAGGCGGAGCTTGAAGCTGAACTGGAGAGGTTGGAGCAGAACATGAAGGCATCGTCTAGTTTGGAGAGACTATCGGATTTTGTTGGGCTTGATCCTGACTTCATCGCAGATGTGGTTCAGGGAGAGCTGAGAGTGGACACCCTTAACAGGCAACCTGGTGAGCAATCAGACTCGGACCTTGATGTAAGTGGATCCTCAACCCATCATTCTGCAAACTATGCAGTATCACCTCGGGAGCTGAGCTTGCGTCTCCATGAGGTAATCCAGTCAAGGCTTGAAGCACGCATCATAGAGCTCGAGGCAGCTCTTCAAAACAACCAGAAGAGGCCACACTCCATGCGACAAGAAAGCATAATCTCTACGAGGGAATTGTATAGTGAAGTAGGATCTTTATCAACCCAGGAAAGCCCAATCTTTATGGATGAAGGCACTAACCATCCTATGGTTATAAATTTGTCAGGGGAAACCCTAGAAGCATACAATGAGGCTTGTGAAGAGATCAGCAAGATGCTTAGAACAGGTGGGAATGGTGGGAATGGTGGATCCATCATGCATCAAGATATCACTGGAGAGAGATGGTTGTCGAGAAATTTGGTTTGTGATATGATCAGGTCTTGGGAAGAACGGACGTCAAGGAGCTGGGGATCAAATGAGGTTGGTGAGAGTGAGGATGATGAAGAAGATGAGATGGGAAAGCTTTTGATAAAGCAGATTGTGGAAAAAACAAGGCAAGGTTCTGCTGCAGTTTTACATGCTCAAAGGATGTTGTATTCTATGAATGACCAATGA 1800 44.11 MDLWVVAAAAGAGYLAKYWQNFSNEKEGSLSLSGESKPRNLLQQIQERNGPFRRLRQKQLGIDDILGSENLGEIGDLATGVASTNDFDGKGKAEFSGNSDNLTDVLTTQETRFKRHKAFRSRRPLEYSIKPLDSLESCVASQLYREHENMNEYEFSSLPSPYTPTVRPLLATDGSRVISRVGGGSFRAELQFESEKKKLHKGDGTHLEENETLLGLPPLPSIGSLQLPWKLKQNVRKGRVQRSSSPGIRASSEAFHSQGSPNGMFLFFLGITIGVMATLVASKREVDKLNEQLKQTENLVEDLHEELEMKDFLTVKDLTNEEPDNQNTENSELISKIEAELEAELERLEQNMKASSSLERLSDFVGLDPDFIADVVQGELRVDTLNRQPGEQSDSDLDVSGSSTHHSANYAVSPRELSLRLHEVIQSRLEARIIELEAALQNNQKRPHSMRQESIISTRELYSEVGSLSTQESPIFMDEGTNHPMVINLSGETLEAYNEACEEISKMLRTGGNGGNGGSIMHQDITGERWLSRNLVCDMIRSWEERTSRSWGSNEVGESEDDEEDEMGKLLIKQIVEKTRQGSAAVLHAQRMLYSMNDQ* 600
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00037 599 Coils Coil 331 358 - -
Vivi1g00037 599 PANTHER EMB|CAB62613.1 1 482 IPR040348 GO:0008356(InterPro)
Vivi1g00037 599 Coils Coil 426 446 - -
Vivi1g00037 599 Coils Coil 279 310 - -
Vivi1g00037 599 MobiDBLite consensus disorder prediction 238 256 - -
Vivi1g00037 599 MobiDBLite consensus disorder prediction 236 256 - -
Vivi1g00037 599 MobiDBLite consensus disorder prediction 385 410 - -
Vivi1g00037 599 MobiDBLite consensus disorder prediction 386 410 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00037 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5468224 Vivi Vivi1g00037 Vivi-Chr1:459188 Vivi17g00656 Vivi-Chr17:8187656