AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi1g00049 | ATGGCTTCGCTGGCGGCTTCGGTTCGTTGCTCTCAGTTTTCTTCTCTGGGCTTGAATGCGAAGAGAATTTCGCGTAATTATGGACTGCCCAGGACTCCATCACTTGTTTCTGCGAGTCCCTTCTCGGCGCTGCCGGAGATTCGAGTGTCTGCGGCTCCGGTTCAATTCTCCGGCAATGCTTTGAAATTTGCTGGTTGGGATCCTCTGCTGAGGCGGCAAGGTGGCGCCGGAGTAAAACTTCCTGTTCCGGCGGCTGCAGCTGCGGATGCCGATGGTGTTACAAAGCCTTCAAAGAGCTTTGCAGAGAAATTCCCCGTCCTGGTCACCGGATTCTTTTTCTTTATGTGGTACTTCTTGAATGTAATTTTCAACATACTTAACAAGAAGGTTTATAATTATTTCCCATACCCATACTTTGTTTCTCTTATACATCTCCTTGTGGGCGTGGCCTACTGTCTTGTCAGTTGGGCTGTTGGTTTACCAAAACGAGCTCCGATGGATAAGGAGCTCCTGCTGCTCCTCACTCCTGTTGCACTCTGCCATGCCCTTGGACATGTTATGTCTAATGTGTCATTTGCAGCGGTGGCTGTGTCATTTACCCACACTATCAAAGCCCTGGAGCCATTTTTCAATGCTGCTGCTTCTCAGTTTGTTTTAGGCCATCAAATTCCCTTTTCCCTCTGGCTGTCATTGGCCCCTGTTGTTATTGGCGTATCAATGGCATCTCTGACTGAACTTTCTTTTAACTGGACTGGCTTCATTAGTGCAATGATTTCAAATATTGCATTTACCTACAGAAGTATATATTCAAAGAAAGCAATGACGGGAATGGACAGCACAAATGTATATGCATACACTTCAATAATCGCCCTCCTGTTTTGCATCCCACCGGCAGTACTGATTGAGGGGCCTCAGCTGATGCAGTATGGTTTCAGGGATGCAATTGCTAAAGTCGGTCTAACCAAATTTTTGTCTGATCTATTTTGGATTGGAATGTTTTACCATCTGTACAATCAGCTTGCTACCAACACCTTGGAACGGGTTGCGCCGCTTACACATGCAGTTGGAAATGTGTTGAAGCGAGTTTTTGTCATTGGATTCTCCATTGTTATATTCGGGAACAAAATCTCTAGGCAGACTGGGATTGGAACTGCAATAGCCATTGCTGGTGTTGCCATTTACTCCCTCATAAAGGCAAACATTGAAGAGCAAAAACGGAAAGCTGCTGTAACTCCAGCATCATAG | 1245 | 45.94 | MASLAASVRCSQFSSLGLNAKRISRNYGLPRTPSLVSASPFSALPEIRVSAAPVQFSGNALKFAGWDPLLRRQGGAGVKLPVPAAAAADADGVTKPSKSFAEKFPVLVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSLIHLLVGVAYCLVSWAVGLPKRAPMDKELLLLLTPVALCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGHQIPFSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFRDAIAKVGLTKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISRQTGIGTAIAIAGVAIYSLIKANIEEQKRKAAVTPAS* | 415 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi1g00049 | 414 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 150 | 244 | - | - | |
| Vivi1g00049 | 414 | Pfam | Triose-phosphate Transporter family | 108 | 395 | IPR004853 | - | |
| Vivi1g00049 | 414 | NCBIfam | Tpt phosphate-phosphoenolpyruvate translocator | 107 | 405 | IPR004696 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
| Vivi1g00049 | 414 | PANTHER | SOLUTE CARRIER FAMILY 35 | 103 | 396 | IPR050186 | GO:0005794(PANTHER)|GO:0015297(PANTHER) | |
| Vivi1g00049 | 414 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 324 | 396 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi1g00049 | K15283 | solute carrier family 35, member E1 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr10:340675 | Vivi1g00049 | Vivi-Chr1:550211 | dispersed | |
| Vivi | Vivi-Chr10:1588546 | Vivi1g00049 | Vivi-Chr1:550211 | dispersed | |
| Vivi | Vivi-Chr14:27429817 | Vivi1g00049 | Vivi-Chr1:550211 | dispersed | |
| Vivi | Vivi-Chr17:9846863 | Vivi1g00049 | Vivi-Chr1:550211 | dispersed | |
| Vivi | Vivi-Chr19:6153028 | Vivi1g00049 | Vivi-Chr1:550211 | dispersed | |
| Vivi | Vivi-Chr1:550211 | Vivi6g00254 | Vivi-Chr6:3356318 | dispersed | |
| Vivi | Vivi-Chr1:544467 | Vivi1g00049 | Vivi-Chr1:550211 | tandem |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Vivi14g00227 | . | 18 | 536 | Antiporters gene family | AT3G05030 | 63.916 | 0.0 | 683.0 | |
| Vivi14g00247 | . | 132 | 545 | Antiporters gene family | AT1G08960 | 72.577 | 0.0 | 586.0 | |
| Vivi19g00471 | . | 140 | 388 | Antiporters gene family | AT1G61800 | 89.157 | 9.71e-161 | 449.0 | |
| Vivi19g00478 | . | 286 | 378 | Antiporters gene family | AT5G13490 | 78.495 | 1.07e-44 | 149.0 | |
| Vivi3g00617 | . | 1 | 576 | Antiporters gene family | AT3G19490 | 78.72 | 0.0 | 838.0 | |
| Vivi17g00761 | . | 1 | 404 | Antiporters gene family | AT5G33320 | 68.599 | 0.0 | 516.0 | |
| Vivi17g00758 | . | 1 | 687 | Antiporters gene family | AT3G62270 | 77.155 | 0.0 | 1116.0 | |
| Vivi17g00435 | . | 6 | 303 | Antiporters gene family | AT5G17400 | 80.872 | 1.17e-176 | 489.0 | |
| Vivi7g00214 | . | 15 | 543 | Antiporters gene family | AT3G05030 | 73.346 | 0.0 | 789.0 | |
| Vivi1g00567 | . | 1 | 1144 | Antiporters gene family | AT2G01980 | 65.69 | 0.0 | 1439.0 | |
| Vivi1g00049 | . | 80 | 407 | Antiporters gene family | AT5G46110 | 80.488 | 0.0 | 554.0 | |
| Vivi1g00048 | . | 81 | 407 | Antiporters gene family | AT5G46110 | 67.584 | 4.34e-168 | 473.0 | |
| Vivi10g00029 | . | 53 | 388 | Antiporters gene family | AT1G61800 | 84.15 | 0.0 | 588.0 | |
| Vivi19g00743 | . | 11 | 436 | Antiporters gene family | AT1G55730 | 72.622 | 0.0 | 625.0 | |
| Vivi11g00065 | . | 95 | 569 | Antiporters gene family | AT5G17860 | 39.382 | 5.22e-110 | 338.0 | |
| Vivi11g00199 | . | 73 | 592 | Antiporters gene family | AT2G19600 | 86.857 | 0.0 | 887.0 | |
| Vivi11g00419 | . | 6 | 679 | Antiporters gene family | AT1G15460 | 68.328 | 0.0 | 975.0 | |
| Vivi3g00977 | . | 227 | 563 | Antiporters gene family | AT5G64290 | 81.899 | 0.0 | 584.0 | |
| Vivi9g00957 | . | 21 | 440 | Antiporters gene family | AT1G55730 | 69.575 | 0.0 | 586.0 | |
| Vivi9g00366 | . | 1 | 292 | Antiporters gene family | AT1G79900 | 70.915 | 3.94e-146 | 412.0 | |
| Vivi9g00469 | . | 6 | 664 | Antiporters gene family | AT1G15460 | 72.605 | 0.0 | 998.0 | |
| Vivi5g00225 | . | 1 | 687 | Antiporters gene family | AT3G62270 | 78.242 | 0.0 | 1125.0 | |
| Vivi5g00290 | . | 1 | 799 | Antiporters gene family | AT3G17630 | 69.95 | 0.0 | 1074.0 | |
| Vivi5g00367 | . | 5 | 537 | Antiporters gene family | AT3G05030 | 77.154 | 0.0 | 850.0 | |
| Vivi16g00519 | . | 22 | 566 | Antiporters gene family | AT5G51710 | 82.94 | 0.0 | 924.0 | |
| Vivi15g00014 | . | 252 | 444 | Antiporters gene family | AT3G05030 | 35.897 | 4.13e-24 | 100.0 | |
| Vivi15g00012 | . | 10 | 212 | Antiporters gene family | AT5G27150 | 31.278 | 4.35e-19 | 85.1 | |
| Vivi2g00074 | . | 1 | 451 | Antiporters gene family | AT5G41610 | 77.704 | 0.0 | 689.0 | |
| Vivi2g00075 | . | 293 | 449 | Antiporters gene family | AT5G41610 | 65.19 | 6.96e-59 | 195.0 | |
| Vivi2g00076 | . | 9 | 164 | Antiporters gene family | AT4G23700 | 65.385 | 1.27e-57 | 192.0 | |
| Vivi2g00077 | . | 1 | 656 | Antiporters gene family | AT5G41610 | 71.037 | 0.0 | 922.0 | |
| Vivi2g00078 | . | 1 | 518 | Antiporters gene family | AT5G41610 | 72.973 | 0.0 | 752.0 | |
| Vivi12g00276 | . | 85 | 379 | Antiporters gene family | AT4G28390 | 77.627 | 1.75e-151 | 425.0 | |
| Vivi12g00051 | . | 31 | 290 | Antiporters gene family | AT1G79900 | 25.091 | 2.74e-07 | 49.7 | |
| Vivi10g00122 | . | 30 | 283 | Antiporters gene family | AT1G79900 | 28.52 | 6.37e-32 | 118.0 | |
| Vivi10g00142 | . | 1 | 410 | Antiporters gene family | AT5G46110 | 80.0 | 0.0 | 667.0 | |
| Vivi10g00377 | . | 9 | 792 | Antiporters gene family | AT2G13620 | 47.029 | 0.0 | 718.0 | |
| Vivi14g00373 | . | 2 | 540 | Antiporters gene family | AT3G05030 | 78.108 | 0.0 | 873.0 | |
| Vivi6g00714 | . | 15 | 807 | Antiporters gene family | AT2G13620 | 40.449 | 0.0 | 573.0 | |
| Vivi6g00713 | . | 15 | 785 | Antiporters gene family | AT1G06970 | 43.428 | 0.0 | 656.0 | |
| Vivi6g00712 | . | 72 | 796 | Antiporters gene family | AT2G13620 | 38.556 | 2.24e-178 | 530.0 | |
| Vivi6g00706 | . | 41 | 835 | Antiporters gene family | AT5G37060 | 46.883 | 0.0 | 724.0 | |
| Vivi6g00623 | . | 32 | 438 | Antiporters gene family | AT3G51860 | 72.727 | 0.0 | 555.0 | |
| Vivi6g00203 | . | 346 | 557 | Antiporters gene family | AT5G12860 | 91.038 | 3.17e-134 | 386.0 | |
| Vivi6g00181 | . | 90 | 385 | Antiporters gene family | AT5G13490 | 91.554 | 0.0 | 532.0 | |
| Vivi4g01313 | . | 9 | 805 | Antiporters gene family | AT2G13620 | 74.529 | 0.0 | 1201.0 | |
| Vivi7g00312 | . | 22 | 539 | Antiporters gene family | AT2G47600 | 69.79 | 0.0 | 742.0 | |
| Vivi7g00446 | . | 1 | 688 | Antiporters gene family | AT3G62270 | 81.779 | 0.0 | 1176.0 | |
| Vivi8g00105 | . | 46 | 567 | Antiporters gene family | AT5G17860 | 49.046 | 2.27e-161 | 468.0 | |
| Vivi12g00752 | . | 62 | 436 | Antiporters gene family | AT3G13320 | 77.6 | 0.0 | 598.0 | |
| Vivi13g01119 | . | 27 | 801 | Antiporters gene family | AT3G52080 | 46.461 | 0.0 | 720.0 | |
| Vivi13g01118 | . | 697 | 801 | Antiporters gene family | AT3G52080 | 46.667 | 1.75e-23 | 95.9 | |
| Vivi14g01332 | . | 41 | 381 | Antiporters gene family | AT3G01550 | 67.836 | 2.25e-156 | 452.0 | |
| Vivi8g00893 | . | 37 | 448 | Antiporters gene family | AT3G51860 | 72.222 | 0.0 | 556.0 | |
| Vivi8g00701 | . | 1 | 839 | Antiporters gene family | AT3G53720 | 68.445 | 0.0 | 1085.0 | |
| Vivi8g00700 | . | 1 | 819 | Antiporters gene family | AT3G53720 | 60.482 | 0.0 | 895.0 | |
| Vivi4g00090 | . | 10 | 298 | Antiporters gene family | AT5G17400 | 40.541 | 3.25e-69 | 216.0 | |
| Vivi4g00435 | . | 13 | 669 | Antiporters gene family | AT1G15460 | 69.985 | 0.0 | 970.0 | |
| Vivi14g00935 | . | 74 | 134 | Antiporters gene family | AT1G55730 | 70.492 | 3.64e-21 | 95.9 | |
| Vivi6g00858 | . | 51 | 352 | Antiporters gene family | AT5G17860 | 45.695 | 1.05e-77 | 251.0 | |
| Vivi6g00848 | . | 15 | 777 | Antiporters gene family | AT1G16380 | 43.372 | 0.0 | 614.0 | |
| Vivi19g00594 | . | 12 | 528 | Antiporters gene family | AT5G55470 | 73.308 | 0.0 | 789.0 |