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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00050 ATGTCCGTACACTCTCCGTGCAAAGCTCCCCCTTCTTCCACTTCTTCTCTTTCCAAGGCATCTCTAAATGAGCAATCTCAAGTTGATTTGGAACTCCGAATTCTTGAAGCTCTTGAAATTTATCCTCTTGTCAAGCTACAAGGCATTCATCGTCACTTTATCCTCTATAGTCTAATGGAATTTATGCGAAGAAGCTTTGAACGGAACTTCACTTCTGAGGAGGTTTTGCAGTTGCTGGATCGTTTCTACAACTTAGAAATGCTGAAACCAGATGATGAGGACTCGGAGTTCTTAAGTCAAGAGGAAGAATTTTGCTTGCCCCAAAGTTATTTTGCCAAAGAAGAATCGTAA 351 41.03 MSVHSPCKAPPSSTSSLSKASLNEQSQVDLELRILEALEIYPLVKLQGIHRHFILYSLMEFMRRSFERNFTSEEVLQLLDRFYNLEMLKPDDEDSEFLSQEEEFCLPQSYFAKEES* 117
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00050 116 Pfam Chromatin modification-related protein EAF7 47 96 IPR012423 GO:0005634(InterPro)|GO:0006355(InterPro)|GO:0043189(InterPro)
Vivi1g00050 116 PANTHER MRG-BINDING PROTEIN 11 115 IPR012423 GO:0005634(InterPro)|GO:0006355(InterPro)|GO:0006357(PANTHER)|GO:0016573(PANTHER)|GO:0035267(PANTHER)|GO:0043189(InterPro)
Vivi1g00050 116 MobiDBLite consensus disorder prediction 1 22 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00050 - -