Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi1g00056	ATGTTCGGGTTTATGAAATCTCCCATGAATAAACCTACACTCCCTGGACTAAACTTCAACATTGAGGACCAGTACAAGAACGATTTTCGCAACTCGGGAGGGCTAGAGAACCAGAGTGTGCAGGAACTGGAGAATTATGCTGCATACAAGGCTAAGGAGACTACCAAGACTGTCAACAACTGCCTGAAGATAGCTGAGGACATTAGGGAGGATGCTACCAATACCCTTGCCACTTTGCATCAGCAGGGTGAGCAAATCACCAGGACCCATATGATGGCTGCTGATATGGATAAGGATTTGAGCAAGGGTGAGAAGCTTTTGGGCAACCTTGGGGGCATGTTCTCCAGGACTTGGAAGCCAAAGAAATCCAAAGATATTACAGGGCCTCTTATCACAAGTGAAGACTCCAAAGGAGGGCCAGCCAGCTTGGAGCAGAGGCAAAAGCTGGGCTTAGCCCCAGCACCGAAAGGACGGACAACTTCTCGAGCACCTGGTCCTGAACCAACAGCTGCCATGCAGCAAGTTGAGGGAGAGATGTTGAAACAAGACGATGCCCTTTCTGACCTGAGTAATATCTTGGGGGACCTGAAGAATATGGCTGCTGACATGGGATCTGAACTTGATAGACAAAATAAAGCTCTTGATCATCTCAGTGATGATGTTGATGAGCTAAATGCTCGTGTGAAAGGCGCCAATCAGCGCGCACGACGACTACTTGCAAAGTGA	726	48.35	MFGFMKSPMNKPTLPGLNFNIEDQYKNDFRNSGGLENQSVQELENYAAYKAKETTKTVNNCLKIAEDIREDATNTLATLHQQGEQITRTHMMAADMDKDLSKGEKLLGNLGGMFSRTWKPKKSKDITGPLITSEDSKGGPASLEQRQKLGLAPAPKGRTTSRAPGPEPTAAMQQVEGEMLKQDDALSDLSNILGDLKNMAADMGSELDRQNKALDHLSDDVDELNARVKGANQRARRLLAK*	242

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi1g00056	241	SMART	tSNARE-6	171	238	IPR000727	-
	Vivi1g00056	241	SMART	tSNARE-6	43	110	IPR000727	-
	Vivi1g00056	241	Gene3D	-	34	112	-	-
	Vivi1g00056	241	Coils	Coil	207	241	-	-
	Vivi1g00056	241	MobiDBLite	consensus disorder prediction	120	169	-	-
	Vivi1g00056	241	SUPERFAMILY	SNARE fusion complex	38	108	-	-
	Vivi1g00056	241	ProSiteProfiles	t-SNARE coiled-coil homology domain profile.	176	238	IPR000727	-
	Vivi1g00056	241	PANTHER	SYNAPTOSOMAL ASSOCIATED PROTEIN	34	240	-	GO:0005886(PANTHER)
	Vivi1g00056	241	Coils	Coil	62	82	-	-
	Vivi1g00056	241	CDD	SNARE-Qc	179	237	-	-
	Vivi1g00056	241	FunFam	SNAP25 homologous protein SNAP33	34	111	-	-
	Vivi1g00056	241	SUPERFAMILY	SNARE fusion complex	171	239	-	-
	Vivi1g00056	241	CDD	SNARE-SNAP25N-23N-29N-SEC9N	45	109	IPR044766	GO:0005484(InterPro)\|GO:0031201(InterPro)
	Vivi1g00056	241	Gene3D	-	173	239	-	-
	Vivi1g00056	241	FunFam	SNAP25 homologous protein SNAP33	173	240	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi1g00056	K18211	synaptosomal-associated protein 25

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Vivi	Vivi-Chr17:7520918	Vivi1g00056	Vivi-Chr1:593578	dispersed