Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi1g00076 | ATGGTACAATGTGTGTCAGTAAGCACTCTGACAACCTCTGGAAATGGTGGGGTTTATGGGTCCACTGCTTTATGGGGGAGACATTTCCAGTTAATGAGAAAAACCCAGATTCGCACAGGGAGTGAAAGAAATTTTCTTTGGCATCACTGTGCACAGAGATTATTCTTTGCCGGTCAACTTGTTATGCAGAGGCAAAGGAATTTGAGGGTTGAAGCTGGATGGCTGTTTAAAGGTGGTGGTGACCAGGGGTTAGATGCAAGCTCAGAGTGTAGTGAGAGTGCTAATGAGGATATTTTGATTTTCTTTTTCCAGCTGGACTTGGCGACTCGAGTACAGTATGCTTTGAATACGGAGCAGTATGAAATAGCGCAACAACTGAGAGATAAGCTGACTGAGGTTGAAGCAGAGGTTGTCAAGCAGCGAGAAGCAAAAAGGGGATCCACATCAAAGAGTGAAGCTCAAGACAAAGCTTTAAGTATGATACGTCTACGGGCAGACCTGCAGAAAGCGATTGAGGCAGAAAACTATGCATTGGCAGCTGAGTTGCGAGATGAAATTAACAAACTAGAGGCAGAGTCTCTGGCTGCATCAGCAAATGCTCTGGTGTATGAAAATACACCATATGCATTTCGTTTGGGCCAGAAAGTGAGGCATAAAGTGTTTGGCTATTCTGCTGTGATTTGTGGAATGGATCCAGTGTGCTGTGAATCAAGTTCATGGAGGGAAAGCGCACATGTTGATAAGTTGACTCGGGGTTCTAATCAGCCATTTTATCAGGTATTGGTTGATGTACATGTAGACCCCAATCTATTAGTGGCATATGTTCCAGAGGAGAATTTGCTGGTCCCTGATGGACCAAGACCAAACAAGGGCAGGTTTGATCACCCCTATCTTTCTTTTTTATTTTACGGCATGGATGCAGCTGGAGATTTCATTCCAATCAAGCAGCTCCGGGAGAAGTACAATAGGCCCCGGCATGAAGTGCCTGGTGATCCACCAGGCGAGGGTGGAGAAGATGCTTAA | 1023 | 45.26 | MVQCVSVSTLTTSGNGGVYGSTALWGRHFQLMRKTQIRTGSERNFLWHHCAQRLFFAGQLVMQRQRNLRVEAGWLFKGGGDQGLDASSECSESANEDILIFFFQLDLATRVQYALNTEQYEIAQQLRDKLTEVEAEVVKQREAKRGSTSKSEAQDKALSMIRLRADLQKAIEAENYALAAELRDEINKLEAESLAASANALVYENTPYAFRLGQKVRHKVFGYSAVICGMDPVCCESSSWRESAHVDKLTRGSNQPFYQVLVDVHVDPNLLVAYVPEENLLVPDGPRPNKGRFDHPYLSFLFYGMDAAGDFIPIKQLREKYNRPRHEVPGDPPGEGGEDA* | 341 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi1g00076 | 340 | Coils | Coil | 116 | 143 | - | - | |
| Vivi1g00076 | 340 | Pfam | UvrB-uvrC motif | 161 | 191 | IPR001943 | GO:0005515(InterPro) | |
| Vivi1g00076 | 340 | SUPERFAMILY | YccV-like | 209 | 306 | IPR036623 | GO:0003677(InterPro) | |
| Vivi1g00076 | 340 | Pfam | Hemimethylated DNA-binding protein YccV like | 209 | 307 | IPR011722 | GO:0003677(InterPro) | |
| Vivi1g00076 | 340 | SMART | YccV-like-2-a | 209 | 313 | IPR011722 | GO:0003677(InterPro) | |
| Vivi1g00076 | 340 | Coils | Coil | 172 | 199 | - | - | |
| Vivi1g00076 | 340 | PANTHER | YCCV-LIKE DOMAIN-CONTAINING PROTEIN | 5 | 333 | IPR053189 | - | |
| Vivi1g00076 | 340 | Gene3D | - | 207 | 309 | IPR036623 | GO:0003677(InterPro) | |
| Vivi1g00076 | 340 | NCBIfam | heat shock protein HspQ | 208 | 311 | IPR011722 | GO:0003677(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi1g00076 | - | - |