AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00110 ATGTGGATTGCACCCATTGCAATCTTATATGGTTTTAACCATAATTTGTTTCCTGGTTCAACCCAGTTGTCCTCCTATTCTGCCACGCTGTTGAGCGGATTCATTGCTGTCATATCAGTCAATATAGTTATCGCCTTCTACATTTTTATGGCAATGAAGGAACCTTCAGACAAACATGAACCAGATCCTGCTTTTCTTGCTGCTGCCAAGGCCAGTGTAAGCCAATCTACACCTGGTGAAACTGAGGATCCTTCCCAATCCCGTGATAAACAAGAATAG 279 42.65 MWIAPIAILYGFNHNLFPGSTQLSSYSATLLSGFIAVISVNIVIAFYIFMAMKEPSDKHEPDPAFLAAAKASVSQSTPGETEDPSQSRDKQE* 93
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00110 92 PANTHER VACUOLAR ATPASE ASSEMBLY INTEGRAL MEMBRANE PROTEIN VMA21 1 89 IPR019013 GO:0005789(PANTHER)|GO:0070072(PANTHER)|GO:0070072(InterPro)
Vivi1g00110 92 MobiDBLite consensus disorder prediction 69 92 - -
Vivi1g00110 92 Pfam VMA21-like domain 1 52 IPR019013 GO:0070072(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00110 K23952 vacuolar ATPase assembly integral membrane protein VMA21