Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi1g00134	ATGGCTTCCGGAATCGAGTTTGAGGAAGACAGTGAAAACAAAGGTAGTATGTGGGTTTTGGATCAGAAGCTTGATCAGCCCATGGATGAGGAGGCTGGCAGGCTTAGAAATATGTACAGAGAAAAGAAATTCTCGGCAGTATTGCTTCTTCGGCTTGCATTTCAGAGTCTTGGAGTGGTCTATGGAGACTTGGGCACATCTCCCTTATATGTTTTCTATAATACATTTCCTCGTGGAATCGAAGATCCTGAGGATGTGGTTGGGGCTCTTTCGTTGATCATATACTCCCTTACACTTATTCCGCTGCTCAAGTATATTTTTGTTGTGTGTAGAGCAAATGATAATGGCCAAGGTGGAACATTTGCTCTTTATTCATTACTTTGTCGACATGCAAAAATAAATACTATTCCTAATCAACATCGAACTGATGAAGAGCTTACAACATATAGTCGTACTACATTCCATGAACATTCTTATGCTGCAAAAACAAAAAGATGGTTGGAGGGGCATGCATCTAGGAAGAACATGCTCCTTATTCTTGTCCTTGTTGGTACATGCATGTTGATTGGAGATGGTATTCTCACTCCTGCTATATCAGTTCTTTCTGCTGCTGGTGGGATCAAGGTGGATCACCCTGGGATGAGTAATGAGATAGTTGTTCTTGTCGCTGTTGTAATCTTAGTAGGTTTGTTTAGCATGCAACATTATGGTACAGATAGAGTTGGTTGGCTCTTTGCTCCAATTGTTCTGCTTTGGTTTCTTGTGATTGGAGGTATTGGTATATTCAACATCTGGAAGTATGATAGCAGTGTTCTGAAAGCATTTTCACCTGTGTACATATATCGGTATTTTAAAAGGGGAGGGAGAGATGGTTGGACCTCTCTTGGAGGGATCATGCTTAGTATCACTGGGACGGAGGCACTTTTTGCCGACCTAGCCCATTTTCCAGTTTCAGCTGTACAGCTTGCGTTCACAGTAGTTGTATTTCCTTGCCTTCTTTTAGCCTATTCTGGACAAGCTGCATACCTCGTGAAAAACCAGGATCATGTGGTTGACGCATTCTATCGTTCTATTCCAGACAGCATATACTGGCCAGTGTTTGTTGTTGCAACTGCAGCTGCTATTGTTGCGAGTCAGGCGACCATATCTGCAACTTTTTCGATAATCAAACAGGCCCTTGCTCTTGGCTGTTTTCCAAGAGTCAAAGTTGTACATACATCAAAGAAGTTTCTTGGCCAGATATATATTCCAGATATTAATTGGGTCCTTATGGTTCTTTGCATTGCTGTGACTGCTGGGTTCAAAAATCAAAGCCAAATTGGCAATGCGTATGGGACAGCTGTCGTGATAGTCATGCTGGCAACCACATTTCTGATGATATTAATTATGTTATTAGTGTGGCGCTGCCACTGGCTTCTTGTCTTAATCTTCACTGGCTTATCACTGGCGGTGGAGTGCACTTACTTCTCTGCCGTACTTTTCAAGGTCGATCAAGGCGGTTGGGTCCCTCTTGTGATTGCAGCTGCTTTTCTCATTATCATGTACGTCTGGCATTATGGTACAGTGAAGCGCTATGAGTTTGAGATGCACAGTAAGGTTTCAATGGCGTGGATTCTTGGGCTTGGCCCTAGTTTAGGGCTTGTCCGTGTCCCTGGTATTGGACTTGTGTACACTGAGCTAGCGAGTGGGGTGCCCCACATTTTCTCCCACTTCATCACAAACCTACCAGCCATCCATTCTGTCGTTGTTTTTGTCTGTGTCAAGTACCTTCCTGTCTACACTGTTCCAGAAGAAGAGAGGTTCCTTGTCAAGCGGATTGGACCCAAGAATTTCCACATGTTCCGTTGTGTTGCAAGATATGGTTACAAAGACCTCCATAAGAAAGATGATGATTTTGAGAAAAAGCTCTTCGATAATCTCTTCATGTTTCAATCAAGGGACTGCCTGTTGAATGATAATGGCAACACTAATTCCTCCAACTTGGACCTGACAATTTCATCAGTGGATTCAATTGGTGATGAGTTGGAATTCATGAACAACTGTAGATCTGCAGGGGTGGTGCACATACTGGGAAACACGGTAGTGAGAGCTAGGAGGGATTCAAGATTCTACAAGAAGATAGCTGTTGATTATATATATGCATTTCTCAGGAAGATATGTAGGGAGAACAGTGTGATCTTTAATGTTCCTCACGAGAGTCTTTTGAACGTTGGGCAGATATTCTATGTTTAA	2232	42.7	MASGIEFEEDSENKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSAVLLLRLAFQSLGVVYGDLGTSPLYVFYNTFPRGIEDPEDVVGALSLIIYSLTLIPLLKYIFVVCRANDNGQGGTFALYSLLCRHAKINTIPNQHRTDEELTTYSRTTFHEHSYAAKTKRWLEGHASRKNMLLILVLVGTCMLIGDGILTPAISVLSAAGGIKVDHPGMSNEIVVLVAVVILVGLFSMQHYGTDRVGWLFAPIVLLWFLVIGGIGIFNIWKYDSSVLKAFSPVYIYRYFKRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAVQLAFTVVVFPCLLLAYSGQAAYLVKNQDHVVDAFYRSIPDSIYWPVFVVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWVLMVLCIAVTAGFKNQSQIGNAYGTAVVIVMLATTFLMILIMLLVWRCHWLLVLIFTGLSLAVECTYFSAVLFKVDQGGWVPLVIAAAFLIIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLFDNLFMFQSRDCLLNDNGNTNSSNLDLTISSVDSIGDELEFMNNCRSAGVVHILGNTVVRARRDSRFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV*	744

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi1g00134	743	Pfam	K+ potassium transporter integral membrane domain	52	538	IPR053951	-
	Vivi1g00134	743	Pfam	K+ potassium transporter C-terminal domain	551	740	IPR053952	-
	Vivi1g00134	743	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	45	742	IPR003855	GO:0006813(PANTHER)\|GO:0015079(PANTHER)\|GO:0015079(InterPro)\|GO:0016020(InterPro)\|GO:0016020(PANTHER)\|GO:0071805(InterPro)
	Vivi1g00134	743	NCBIfam	potassium uptake protein	52	742	IPR003855	GO:0015079(InterPro)\|GO:0016020(InterPro)\|GO:0071805(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi1g00134	K03549	KUP system potassium uptake protein

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Vivi	Vivi-Chr1:1316104	Vivi1g00743	Vivi-Chr1:8939369	dispersed
	Vivi	Vivi-Chr1:1316104	Vivi1g00742	Vivi-Chr1:8922597	transposed

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi1g00134	.	16	792	KUP gene family	AT2G35060	79.563	0.0	1224.0
	Vivi1g00743	.	1	627	KUP gene family	AT1G70300	85.669	0.0	1121.0
	Vivi14g01387	.	1	781	KUP gene family	AT5G14880	76.44	0.0	1194.0
	Vivi14g01070	.	1	789	KUP gene family	AT3G02050	71.61	0.0	1081.0