AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00519 ATGGGCCTCCCCGTTGGCAAACACATCGTCCCCAACAAACCACTTCCTGTAAATGACGAGCTGATTTGGGACAACGGGACTCCATTCCCCGAACCCTGTATAGATCGCATTGCTGAAACTGTGGGAAAGTATGAAGCATTAGCTTGGATGTGTGGAGGTTTGAGCTTTTTTGCGTCCCTTGGACTGTTGGCCGTGTGGAATGATAAAGCCTCTAAGATACCGTTTAGAATGGAGAGTTGGGGTTCTGGTCTTTCTGAGAGAGTGAAGAGGCAATTTTGCCTATCAATTGGAAAACATGGAAACCCAACTAGAAAACAGAAGAAAAATAAATTGTACTTCCCATTCGGTTATAGATTGGAGCATTTACCTTGGTTGATGGAGTATCATCTTTTCCTATACAAAAGATTTAAGCTATGTTTGGTTTTTGAAAAGTACCAAGAGAAGAAAACTTTAGGTGCGCCGTATAGATCGCTGACTGTTTGGGATGGTGTGGAGGAGAGAATGAGGAAAAAATCAGCTAGATGGAAGAGCCAATATATATCCAAAGGAGGTAGGATTACTTTGATTTGGAGTACTCTAGCTAGTATGCCCATTTACTTTATGTCCATGCTCTCTATGCCTAGAAAAGTTAGACTGAGGTTAGAGCGAATTCAGAGGGATTTCCTATGGGGAGGTGGGGCTCTTGAGAGGAAGCTTCATCTGGTTAGGTGGGATTTGGTATGCCTTGAGAAGTGTAATGGGGGGTTGGGGGTTAAGAGTCTTTCTATCCTCAATAAGACTCTTTTGTGTAAATGGAGTTGGAGATTTGCTATTGAGAGAGAGGCTTTTTGGAACCAAGTGATTAGGGGAAAGTATGGGGAGGAGCAAGGGGGATGGAGTTCAAAGGAAGCAAAGGGGGGGGGGGGGGTATGGTTCTCTCAAACACCTAGGGTCTATCCATATGACAACCTGCGAGTGGAGCTTGGTGGAGAACCTTAG 978 44.48 MGLPVGKHIVPNKPLPVNDELIWDNGTPFPEPCIDRIAETVGKYEALAWMCGGLSFFASLGLLAVWNDKASKIPFRMESWGSGLSERVKRQFCLSIGKHGNPTRKQKKNKLYFPFGYRLEHLPWLMEYHLFLYKRFKLCLVFEKYQEKKTLGAPYRSLTVWDGVEERMRKKSARWKSQYISKGGRITLIWSTLASMPIYFMSMLSMPRKVRLRLERIQRDFLWGGGALERKLHLVRWDLVCLEKCNGGLGVKSLSILNKTLLCKWSWRFAIEREAFWNQVIRGKYGEEQGGWSSKEAKGGGGVWFSQTPRVYPYDNLRVELGGEP* 326
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00519 325 PANTHER NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 8, MITOCHONDRIAL 1 78 IPR038863 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00519 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Vivi Vivi-Chr11:15273242 Vivi2g00519 Vivi-Chr2:5147926 dispersed