AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00523 ATGGAAGCGCTAGAGGAACTGGAGAGGGTTCAAAACCGAGTCCTCCAACGAATAGCAAGCCTAGAGCTCTCTCTTCTCCCTCAACGATTCGCTGACACCCTATCCGTCTCTTCTCCAGCTCAAATTTCCGACGCCAATGGCGACACAGAAGCGCGCCTCTCTGCGATTCTTCGAGCCAACAACGTCCGCGATTTCGCATTCAAGAGAGTGCCCTTCGATTACTATGACTGGCCGATCGAAGCCCGGCGAGACATCCTCGGCGCCCCCTCCGTCCACCATCTCTGCAAAAGCATCGTTCTTGTCAATACTCAAGCTCCATCCAATGTTACTGACTGTAGTGACCGCAACAATTCAAAGTATTATATCGTTGTTGTTCAGTATACTGCTAGATTCAATGCTGAAACTGTGAAGAATTTTCTGTATTCACTCAACAATGGCAAGATACCAAAGAAGAAATTCAACTTGAGGCTTGCTCCTGAGGAGTCATCACAGAAATTGACTGGATATGAGCACAATGGGGTGACATGTATTGGCATGAAAACCGACATTCCGGTGATTTTGGATGAAGCAATTGTAAAGCTTGATTCCAATTTCTTCTGGTTAGGAGGTGGGGAGATTGATCTGAAGCTGGGGATCAAGACTTCTGAATTCATTAACTTTGTTAAACCTTTCATTGTCAGCTGTAGTGGTATTTAA 696 45.83 MEALEELERVQNRVLQRIASLELSLLPQRFADTLSVSSPAQISDANGDTEARLSAILRANNVRDFAFKRVPFDYYDWPIEARRDILGAPSVHHLCKSIVLVNTQAPSNVTDCSDRNNSKYYIVVVQYTARFNAETVKNFLYSLNNGKIPKKKFNLRLAPEESSQKLTGYEHNGVTCIGMKTDIPVILDEAIVKLDSNFFWLGGGEIDLKLGIKTSEFINFVKPFIVSCSGI* 232
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00523 231 Gene3D - 51 229 IPR036754 GO:0002161(InterPro)
Vivi2g00523 231 Pfam Aminoacyl-tRNA editing domain 92 219 IPR007214 GO:0002161(InterPro)
Vivi2g00523 231 Coils Coil 4 24 - -
Vivi2g00523 231 CDD YbaK-like 79 226 - -
Vivi2g00523 231 PANTHER UNCHARACTERIZED 1 228 - -
Vivi2g00523 231 SUPERFAMILY YbaK-ProRS associated domain 63 228 IPR036754 GO:0002161(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00523 - -