Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi2g00529 | ATGGGAACGAGAACGAATTTCTACAAGAATCCCTCATTTTCCTATAACAGAGACTTCAGTCTCTCCTCTGTTCTTCAAAATCTCAAAGCGTACAACATTGCCACCGGAAGCGCTTCTCCGACCGATGAATCACCCCCCGCTAACGAGAAAAAGGTCAACCGGAAACGCCGACCGGACCGGAGATCACCGCCATGTCAGAACCCTGAACTCAAAGAGACCGATGGACCTATGTCTCACCAGGATTTCATCAAAAAAAGAAGGAAGGAAGTTAGTTCGGGTCAGGTTTATCAGGAATTAACTCCAGATATTTTGGGGACTTCTAATTCAGGTTTACATTTAGTGGAGTATGAAAGTGATAAAAGCACTTCTTCAGAATCTGGAGCAGAGCAAGATCCTCCAAATCCTGGTCATATAAATGAAGTTGAACAAGTTAAGAGCAGAAGAGAGCAACGTTTTCCTCTTCCTGGGGAACCTGTTTGTGTGGTTTGTGGCTTGTATGGAGAATATATTTGTAATGAGACTGATGATGATGTCTGCAGTATGGATTGCAAAGCTGAGCTTTTAAAAAATCTCAGGCTTTCTGAGGAGTCTTTAAGCAATGAAGGTTGTCCAACTGTCTCCTCATCTGGACTCAAATGTGCATTACCAGTTCCCGAGCTTGGGGAGGATACTTGGGATTATGTTCATCATCGCTGGTCTAAAAAGAGATCTAGTTTATGCACTTATGAATGTTGGAAATGCCAGAGACCTGGGCACCTTGCTGATGATTGTTTGGTGATGACTTCTAATTCTCAATCGCCCTGTTTAAGTCAAACATGTAACAAGGTACCTATGGGGCAAAACAAATCCACTTTCATATCCAGAGATCTTCTTGGACTGTACAAAAGGTGCCATCAAATAGGCAAAAATTTGACAACGGCAAAGTGCAATTTGTGCTGTAGCTCATCAACTTTGGCCACATGCCTTGATTGCAGTACTGTCATTTGTGATAATGCAGGTCATTTGAAAGAGCATATCATTGCACACCCTTCCCATCAGAAAATTTTCTCATATAAGCTCAAGCGTCTGGTGAAATGCTGTAAATCAACATGCGAGGTGACTGATTTGAAGGATCTTTTAGTCTGCCACTACTGTTTGGACAAAGCCTTTGACAAGTTCTATGATATGTATACTGCAACTTGGAAAGGAAATGGACTTTCAATCATTTGGGGTTCTATTTGCTGTGAAGAGCATTTTGCTTGGCATAGGATGAATTGTTTAAATGCAGATGTAGAAGACAGTGCCTACATTTTCAGGAGGCATGCCCAGAAAAACAATTCTATTCAGCTCAGTGACTTCATTTTTTAG | 1347 | 41.65 | MGTRTNFYKNPSFSYNRDFSLSSVLQNLKAYNIATGSASPTDESPPANEKKVNRKRRPDRRSPPCQNPELKETDGPMSHQDFIKKRRKEVSSGQVYQELTPDILGTSNSGLHLVEYESDKSTSSESGAEQDPPNPGHINEVEQVKSRREQRFPLPGEPVCVVCGLYGEYICNETDDDVCSMDCKAELLKNLRLSEESLSNEGCPTVSSSGLKCALPVPELGEDTWDYVHHRWSKKRSSLCTYECWKCQRPGHLADDCLVMTSNSQSPCLSQTCNKVPMGQNKSTFISRDLLGLYKRCHQIGKNLTTAKCNLCCSSSTLATCLDCSTVICDNAGHLKEHIIAHPSHQKIFSYKLKRLVKCCKSTCEVTDLKDLLVCHYCLDKAFDKFYDMYTATWKGNGLSIIWGSICCEEHFAWHRMNCLNADVEDSAYIFRRHAQKNNSIQLSDFIF* | 449 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi2g00529 | 448 | PANTHER | CCHC-TYPE DOMAIN-CONTAINING PROTEIN | 1 | 448 | - | - | |
| Vivi2g00529 | 448 | Gene3D | - | 140 | 197 | - | - | |
| Vivi2g00529 | 448 | Pfam | HIT zinc finger | 157 | 184 | IPR007529 | - | |
| Vivi2g00529 | 448 | MobiDBLite | consensus disorder prediction | 47 | 67 | - | - | |
| Vivi2g00529 | 448 | MobiDBLite | consensus disorder prediction | 36 | 80 | - | - | |
| Vivi2g00529 | 448 | MobiDBLite | consensus disorder prediction | 116 | 139 | - | - | |
| Vivi2g00529 | 448 | ProSiteProfiles | Zinc finger CCHC-type profile. | 244 | 257 | IPR001878 | GO:0003676(InterPro)|GO:0008270(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi2g00529 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr14:24499875 | Vivi2g00529 | Vivi-Chr2:5231388 | dispersed |