Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi2g00532 | ATGGCTTCATCTCTAGCCCTACGCCGTGCCACTTCCTCTCCTCTCTTCACAAAACTTGTCAGCCCAATACGGGTTGCCTCTGCTTCTCGCTCCTTCAATACCAACGCTCAGGTGGCCGACTACAATGATGGCGAAGACCGCCGCACCGTCTCTCGCCCCCGGTATTCTCCTTCCAATCTCTTCTCAGATGTGTTTGATCCGTTTTCTCGGACGAGAAGTTTGAGCCAGGTGCTGAACTTGATGGATCAGTTCATGGAGAACCCATTAGTGGCAGCATCACGAGGGATGGGAGCTGTGTCGAGAAGAGGATGGGACGTAAAGGAGGAGAAAGACGCTCTGTTCGTAAGAATGGACATGCCGGGACTGGGGAAAGAGGACGTGAAGGTGTCAGTGGAGCAGAACACACTCATCATCAAAGGCGAAGGAGGCAAAGAATTGGAGAACGATGAGACTGGAAGGAAATACACCAGCAGAATCGATCTGCCGGCCAATCTGTACAAGTTTGATGAGATCAAGGCAGAGATGAAGAATGGTGTACTGAAGGTGGTGGTTCCTAAAGTTAAGGAAGATGGGAAGAAAGATGCGTTTCAAGTCAATATCAATTGA | 606 | 50.0 | MASSLALRRATSSPLFTKLVSPIRVASASRSFNTNAQVADYNDGEDRRTVSRPRYSPSNLFSDVFDPFSRTRSLSQVLNLMDQFMENPLVAASRGMGAVSRRGWDVKEEKDALFVRMDMPGLGKEDVKVSVEQNTLIIKGEGGKELENDETGRKYTSRIDLPANLYKFDEIKAEMKNGVLKVVVPKVKEDGKKDAFQVNIN* | 202 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi2g00532 | 201 | ProSiteProfiles | Small heat shock protein (sHSP) domain profile. | 95 | 201 | IPR002068 | - | |
| Vivi2g00532 | 201 | PANTHER | 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL | 1 | 190 | IPR044656 | - | |
| Vivi2g00532 | 201 | SUPERFAMILY | HSP20-like chaperones | 71 | 193 | IPR008978 | - | |
| Vivi2g00532 | 201 | CDD | ACD-sHsps-like | 105 | 178 | - | - | |
| Vivi2g00532 | 201 | Gene3D | - | 60 | 200 | IPR008978 | - | |
| Vivi2g00532 | 201 | Pfam | Hsp20-alpha crystallin family | 105 | 200 | IPR002068 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi2g00532 | K13993 | HSP20 family protein |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr16:11604752 | Vivi2g00532 | Vivi-Chr2:5248528 | dispersed | |
| Vivi | Vivi-Chr1:19257335 | Vivi2g00532 | Vivi-Chr2:5248528 | dispersed | |
| Vivi | Vivi-Chr2:5248528 | Vivi9g00541 | Vivi-Chr9:6710092 | dispersed | |
| Vivi | Vivi-Chr2:5248528 | Vivi2g00533 | Vivi-Chr2:5255210 | tandem |