AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00536 ATGGCTGGAGCATCTTCGCCCTGCATCTTCTGTCAAATTGCCCGCTCTTACACCTCCACCACTCTTCTCCACTCCGATGACAAGGTGGTTGCATTTCAAGACATCAACCCTTCCGCCTTCAGGCATTACTTGGTAATTCCTGTGGAGCACATCGCAACTGTTAAAGACCTCCAGAGGAGAGCTGAAGATTATTCGTTAGTTGGTCACATGTTAAATGTGGGGCAAACCCTACTACACAGAGATGCACCTCATTCCATGGAGTACAGATTGATCCAGAGAAGCTACTCTAGACTTCAGTTACCACCATTAGCTGTTGGAGTGTCCAAGAGCCATGTATTATTGAAAACTTTGGCTTTCATCGGCCTCCATTTAACAGTGTTAACCATCTGCACCTCCATTGTTTGGCACTTCCTTTCACACCTAGATGGAAACGTGTAA 438 46.12 MAGASSPCIFCQIARSYTSTTLLHSDDKVVAFQDINPSAFRHYLVIPVEHIATVKDLQRRAEDYSLVGHMLNVGQTLLHRDAPHSMEYRLIQRSYSRLQLPPLAVGVSKSHVLLKTLAFIGLHLTVLTICTSIVWHFLSHLDGNV* 146
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00536 145 SUPERFAMILY HIT-like 5 84 IPR036265 -
Vivi2g00536 145 ProSiteProfiles HIT domain profile. 9 57 IPR011146 GO:0003824(InterPro)
Vivi2g00536 145 Pfam Scavenger mRNA decapping enzyme C-term binding 8 84 - -
Vivi2g00536 145 Gene3D - 2 114 IPR036265 -
Vivi2g00536 145 PANTHER APRATAXIN-RELATED 4 90 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00536 K22966 sulfate adenylyltransferase (ADP) / adenylylsulfatase [EC:2.7.7.5 3.6.2.1]