AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00964 ATGACAGTTTCGGAGGACGAAGACGAAAATCTTGCTCATTTCCTGGAATCCGAGGTCCTCTCTGAGGCCTCCGATCAGGAAAAAGACGCGGTTGCAGAGCAGCCACAAGCAAAGAGATTGCGCGTGGATGAGGAAGGAAGCAAGAGAAGTGCCCCCAAGAGGATAGAGACTGGCATCTTCAGCAAGATCCCCCCTGAACTTTTCCATCATATCCTCAAATTCCTCTCCTCCGAGGACCTTGTTGCATGCTCACTGGTTTGTCGATTCTTAAACTGTGCAGCATCTGATGAAAGCTTATGGCGTCGACTGTATTGTATGCGCTGGGGTCTGTTGCAGCCTACAAAAAAGTTTCGACAATGTGCTTGGAAAAAGCTGTATATTGAGCGTGATGAAGAAGACATGATTGAATTCGTGAGAAATTGCCCATCTGAGTTCAAGGAGTATTATATCCAAATGCAGGTAGCAAAGAGAAGCCAAGCACCTCTTCTGTCACAGGTAAATGATGACCGGATAATTCTTGACAAGACTGTTGCTGATCAAGTGTCTAGTTGGAAAAGTAGTCGAGGTCTGACTGATAAGGTGGACATCGACCATAACTGTTCTGGAGTAACTTGTACCTACTACCAAATTGGGGATGTATTTGTTTGTGAGAAGACCGGACGTGTTCATGTATGTGATGATACATGCAGAGAAGTTGTTACGGATACAGCCAATGATATTGTGGTTTGTACAATTTCTGGGCACTGTTTTGATAGATTACTGGTATCAGATGAGGAACCAGACATTGAACAGCAACAAGGTGGGGTAACAGATGAAGCTGAACCATTCATGGGATCTGGCCGTTTTGCACGGGCGTATTTGCTAGGATACAACTGCGCTGATGAGAAGGAACTTGAAGCTGCTTTGAGGTTCTGCTGA 918 45.32 MTVSEDEDENLAHFLESEVLSEASDQEKDAVAEQPQAKRLRVDEEGSKRSAPKRIETGIFSKIPPELFHHILKFLSSEDLVACSLVCRFLNCAASDESLWRRLYCMRWGLLQPTKKFRQCAWKKLYIERDEEDMIEFVRNCPSEFKEYYIQMQVAKRSQAPLLSQVNDDRIILDKTVADQVSSWKSSRGLTDKVDIDHNCSGVTCTYYQIGDVFVCEKTGRVHVCDDTCREVVTDTANDIVVCTISGHCFDRLLVSDEEPDIEQQQGGVTDEAEPFMGSGRFARAYLLGYNCADEKELEAALRFC* 306
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00964 305 Gene3D - 47 134 - -
Vivi2g00964 305 ProSiteProfiles F-box domain profile. 57 103 IPR001810 GO:0005515(InterPro)
Vivi2g00964 305 Pfam F-box-like 61 105 IPR001810 GO:0005515(InterPro)
Vivi2g00964 305 PANTHER F-BOX ONLY PROTEIN 3 48 303 IPR052121 GO:0005737(PANTHER)
Vivi2g00964 305 FunFam F-box family protein-like 48 134 - -
Vivi2g00964 305 SUPERFAMILY F-box domain 50 129 IPR036047 GO:0005515(InterPro)
Vivi2g00964 305 CDD F-box-AtSKIP31-like 60 105 - -
Vivi2g00964 305 MobiDBLite consensus disorder prediction 19 50 - -
Vivi2g00964 305 SMART fbox-2 63 103 IPR001810 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00964 - -