AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00934 ATGGAGGTTCCAGCTGAGAGGGGATCCATGGACGTGAAAACCCTAATCTCTCTCTACTCCAACAAGCTCTGGAACCGCATCATCAATATTCTTCCCTTTTCGCATTCCAACTTTCTGGGCAAAATTTCAAGCCTCTATCTACAAGCCATTCGCACAAGATCCCGTCGACGCAGGCCAAGCCTACCTCTTCCGCTCCCTTCCCATTCCCTCGACACTTCTGTTATCCCAATGGAGGCTTCTAGAGTTTTTGATGTTTTAGAGGATATTTTGGAGCACCTTTTTCTGAATTTGCATAACATCCAGAAGAATTTACAATTTTGGCAGTCTAGAGCAGAGGAATCAAATGCTCGAAAGGCATATTTTATGATTTTTGAGAGAGGACCACGGGCTTTTATTACTAGAACAGTTCAATTCATACGTGAATCTGTTGCTCAGGGTTCTTCTTTGCAACTTCTGTCCCAATCTGCATCTGCTCACATATCTGAGAGGATAACTATCTTAACTAGCTTAAGATATTCGCTTGCTACATTTCTGGCACAGGTTCACATAGACATTGACAAATTTGGAGAGGAATTGGTCAATGATCCAGAGAAGTCATTGTCCTCATTATTGGTTACTATAAATGGTTTGTTTTCAAAATTGGAGGCAGCAATTGGCCATCTACATGCAACACGTCAGAGTGATTCTTCTGTGGATGGGAGCTATTCATTTCCTCTTGTGTTTGAGAAACTGCCAGACGTAAACCAGGAAGGGTCTCAGTGGACAGATTGTGAAATTAGAGATGCTATCAACTTGATTTATCAGAATCTATACAAACTGGATTCTTACCTAAGTATCCTTGTTTCCAAACATCGTAAACCGCGGAAATTAACTTTGTACTGGATTCACTATACGTGTGGGGCAGTGGGCTTATCAGTTTGCTCAGTGTGGCTCCTACGTCATAGTAGTTTGATGGGAAGTAATGACATAGAAAATTGGGTTCGTGAAGCTAGGGACTCAACCATTACCTTCTGGAATGATCATGTAGAGCAACCGGCAGTCCTCTACTACTTGTTGACAAACTGTGCAAAAATCAAAGAAGTCTCGAAATATAGGTCTATTCTGTCTATTAGAGATGAACTCTTTGAGACATTCAGGAAGAGGCACAGAAGCGTAATGGAGCTAGAAGATGTGCAGTTAACTGCTAATTCTCTACACAGAATGTTGCTGACTTTTAGCGAGCAAACACAAGGTCAAAAGTTCCCAGAACATGCATCCGACCAGCAAATGCTTGAAATAGTTATGGCCAGGTATGAAAAAGAACTTATGCATCCTATTCAGAATCTTCTTAAAGGCGAGCTTGCTCATGCTTTACTCATCCAGATTCAAAAGCTAAAACTGGATATTGAGACGGCAATGCTTGAACTCAACCAGATCCTCAGGGCCAACGAAATCAATTTTGCAATACTAGCTGCTTTACCAGCTTTCTTTGTCTCTCTTCTTTTAATCATGTTAGTTCGTGCATGGGTTAAGCAGGATACCAGGGCAGAAGGTAGGGGAAGAGTTGCTCGAATCCAGAGGAGGCTACTTGTTGTGGAGGTTGAGAAGTGGATTATGCAGTACCAAACATGTATGAATCAGGGGAAGGAAAAAGATGCTCAATGCATGTTTGGAATGGTGTTATATAGTCTGGATCGGCTATACCGTGCTGTAGAGAGGCATGCAAAGGCAACTGGAGAATGGCTCTGTTTGAGACAAGATATTGTTGAATTGGCGAAGCCTGGACTTGACACTGCTTCTAAGCTCATTTTGACAGCACGGATGGAACGGGTTTATGACTGCTTGCTTCCCTCACTGAAACGGCAGTAG 1848 42.42 MEVPAERGSMDVKTLISLYSNKLWNRIINILPFSHSNFLGKISSLYLQAIRTRSRRRRPSLPLPLPSHSLDTSVIPMEASRVFDVLEDILEHLFLNLHNIQKNLQFWQSRAEESNARKAYFMIFERGPRAFITRTVQFIRESVAQGSSLQLLSQSASAHISERITILTSLRYSLATFLAQVHIDIDKFGEELVNDPEKSLSSLLVTINGLFSKLEAAIGHLHATRQSDSSVDGSYSFPLVFEKLPDVNQEGSQWTDCEIRDAINLIYQNLYKLDSYLSILVSKHRKPRKLTLYWIHYTCGAVGLSVCSVWLLRHSSLMGSNDIENWVREARDSTITFWNDHVEQPAVLYYLLTNCAKIKEVSKYRSILSIRDELFETFRKRHRSVMELEDVQLTANSLHRMLLTFSEQTQGQKFPEHASDQQMLEIVMARYEKELMHPIQNLLKGELAHALLIQIQKLKLDIETAMLELNQILRANEINFAILAALPAFFVSLLLIMLVRAWVKQDTRAEGRGRVARIQRRLLVVEVEKWIMQYQTCMNQGKEKDAQCMFGMVLYSLDRLYRAVERHAKATGEWLCLRQDIVELAKPGLDTASKLILTARMERVYDCLLPSLKRQ* 616
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00934 615 PANTHER NUCLEAR CONTROL OF ATPASE PROTEIN 2 367 610 IPR013946 GO:0005741(PANTHER)
Vivi6g00934 615 Coils Coil 97 117 - -
Vivi6g00934 615 Coils Coil 455 475 - -
Vivi6g00934 615 Pfam ATP synthase regulation protein NCA2 310 605 IPR013946 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00934 K18158 nuclear control of ATPase protein 2