Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi8g00013 | ATGTCATCCTTCAGGAATGCCATCAGTAGACGGGCTTACAAGGAAAGAGCTCAGCCGCATTTGAGGAAAAAGTTTGGGCTCCTTGAGAAACACAAGGACTATGTTGTGCGCGCACAAGCATTCCACAAAAAAGAGGAGGCGCTGCAGAAACTCAAAGAGAAGGCAGCATTCAGGAACCCGGATGAATTTTATTTTAAGATGATTAAAACAAGAACTGTTGATGGAGTCCATAGACCAGAGAGTCAAGCAAATAAATACAGCCCAGAAGAACTCATGCTAATGAAGACCCAAGACATGGGATATGTCCTTCAGAAAGTGCAAAGTGAAAAAAAGAAAATTGAGAAGCTAACTGCTATGCTGCACTCTCTTGATAATCAGCCAACAAACAGACATGTTTACTATGCAGAAGACAGGGAAGAGGCCAGAGAAATACAGGCACAGTCTTCAAGAGGCGGAAATTTGCCTTCTCTGGATGATGTTCCTAATCATATTAAAAGGAAAACTTCTGCTTCCTACAGAGAGCTAGAGACAAGGAAGAATCGGGTAAATGACTTGGAGAAACTATACATGGATATGGCCTTACAAAAGGAGCTGCAGAAAAGGGGTCGAAAACGCAAGCTTCGTGAAGATGAAATAGCCTGTCCAACCTCAAAACCAGTGTACAAATGGAGGGCTGAACGAAAACGGTGA | 690 | 42.9 | MSSFRNAISRRAYKERAQPHLRKKFGLLEKHKDYVVRAQAFHKKEEALQKLKEKAAFRNPDEFYFKMIKTRTVDGVHRPESQANKYSPEELMLMKTQDMGYVLQKVQSEKKKIEKLTAMLHSLDNQPTNRHVYYAEDREEAREIQAQSSRGGNLPSLDDVPNHIKRKTSASYRELETRKNRVNDLEKLYMDMALQKELQKRGRKRKLREDEIACPTSKPVYKWRAERKR* | 230 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi8g00013 | 229 | MobiDBLite | consensus disorder prediction | 145 | 166 | - | - | |
| Vivi8g00013 | 229 | PANTHER | U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11 | 1 | 229 | IPR007144 | GO:0005730(PANTHER)|GO:0006364(InterPro)|GO:0032040(PANTHER)|GO:0032040(InterPro) | |
| Vivi8g00013 | 229 | Pfam | Utp11 protein | 10 | 229 | IPR007144 | GO:0006364(InterPro)|GO:0032040(InterPro) | |
| Vivi8g00013 | 229 | Coils | Coil | 106 | 126 | - | - | |
| Vivi8g00013 | 229 | PIRSF | U3snoRNP11 | 1 | 229 | IPR007144 | GO:0006364(InterPro)|GO:0032040(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi8g00013 | K14769 | U3 small nucleolar RNA-associated protein 11 |