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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi8g00013 ATGTCATCCTTCAGGAATGCCATCAGTAGACGGGCTTACAAGGAAAGAGCTCAGCCGCATTTGAGGAAAAAGTTTGGGCTCCTTGAGAAACACAAGGACTATGTTGTGCGCGCACAAGCATTCCACAAAAAAGAGGAGGCGCTGCAGAAACTCAAAGAGAAGGCAGCATTCAGGAACCCGGATGAATTTTATTTTAAGATGATTAAAACAAGAACTGTTGATGGAGTCCATAGACCAGAGAGTCAAGCAAATAAATACAGCCCAGAAGAACTCATGCTAATGAAGACCCAAGACATGGGATATGTCCTTCAGAAAGTGCAAAGTGAAAAAAAGAAAATTGAGAAGCTAACTGCTATGCTGCACTCTCTTGATAATCAGCCAACAAACAGACATGTTTACTATGCAGAAGACAGGGAAGAGGCCAGAGAAATACAGGCACAGTCTTCAAGAGGCGGAAATTTGCCTTCTCTGGATGATGTTCCTAATCATATTAAAAGGAAAACTTCTGCTTCCTACAGAGAGCTAGAGACAAGGAAGAATCGGGTAAATGACTTGGAGAAACTATACATGGATATGGCCTTACAAAAGGAGCTGCAGAAAAGGGGTCGAAAACGCAAGCTTCGTGAAGATGAAATAGCCTGTCCAACCTCAAAACCAGTGTACAAATGGAGGGCTGAACGAAAACGGTGA 690 42.9 MSSFRNAISRRAYKERAQPHLRKKFGLLEKHKDYVVRAQAFHKKEEALQKLKEKAAFRNPDEFYFKMIKTRTVDGVHRPESQANKYSPEELMLMKTQDMGYVLQKVQSEKKKIEKLTAMLHSLDNQPTNRHVYYAEDREEAREIQAQSSRGGNLPSLDDVPNHIKRKTSASYRELETRKNRVNDLEKLYMDMALQKELQKRGRKRKLREDEIACPTSKPVYKWRAERKR* 230
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi8g00013 229 MobiDBLite consensus disorder prediction 145 166 - -
Vivi8g00013 229 PANTHER U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11 1 229 IPR007144 GO:0005730(PANTHER)|GO:0006364(InterPro)|GO:0032040(PANTHER)|GO:0032040(InterPro)
Vivi8g00013 229 Pfam Utp11 protein 10 229 IPR007144 GO:0006364(InterPro)|GO:0032040(InterPro)
Vivi8g00013 229 Coils Coil 106 126 - -
Vivi8g00013 229 PIRSF U3snoRNP11 1 229 IPR007144 GO:0006364(InterPro)|GO:0032040(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi8g00013 K14769 U3 small nucleolar RNA-associated protein 11