Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi8g00060 | ATGACATCAAAAACATTGAGGAGAAGGCTCCATCATGGAGATGTTGATGGAAAAAGGCATGAGCATTTAGAGACATCGGGTTTGGATGGTTTAAATGAACCTTTACTAGGCAATTATGAATATGATGATAAAGATTCAGAGGGGCCTGTGCTTAAAGACCTCTGGGATGATGAACGAAGGAAGGAGCACCAACACTGGACGATATTATTTTCCCATTTGATTGCAGAATGGGCACAATGGTTAGCTAATATTGTTATAGGTTCTGGAACGCTCCTTAAACGTCTTTTGCCCTTTGATTCTACAACACAAAATGGTCAAAGCAAGAAGATATTGCCACCTTCACTAAGTCCTTTACAGGGGGAAAGACTCAGAAATATGCAGCAAAGACTGGAAGTTCCTTTTGATGGTTCTTGCGTGGAGCATCAGGATGCACTTAGAGAACTCTGGAGCTTAGCTTATCCTGGTAGGGAGCTCCCCTCTCTTAAGTCAGAGCTCTGGAAGGAGATGGGTTGGCAAGGTACTGATCCTTCGACAGATTTTAGGGGTGGCGGATTTATATCATTGGAGAATCTTATCTTTTTTGCCAAGAAGTATCCGGATACATTCCAGAGGTTGTTACACAAACTTGACGGAAACAGGGCCGATTGGGAGTATCCCTTTGCTGTAGCTGGCATCAATATTTCTTTTATGTTGATACAAATGTTAGATCTTCAATCAGGAAAGCCAACTTCTCAGGCAGCAGTCCGGTTTTTACAGCTACTTGGCGAAGATGAAATGGCATTTGACAACCTCTTCTGTGTTGCCTTTCAAATGATGGATGCTCAGTGGCTTGCAAAGCGCGCTTCATATATGGAATTTAATGATGTTCTAAAGTCTACCAGAACACAACTAGAGCGGGAGCTTGAGCTTGAAGATGTCTTCAGTGTGAGAGATTTACCAGCATACAACATGTTGAGAAGATAG | 963 | 42.37 | MTSKTLRRRLHHGDVDGKRHEHLETSGLDGLNEPLLGNYEYDDKDSEGPVLKDLWDDERRKEHQHWTILFSHLIAEWAQWLANIVIGSGTLLKRLLPFDSTTQNGQSKKILPPSLSPLQGERLRNMQQRLEVPFDGSCVEHQDALRELWSLAYPGRELPSLKSELWKEMGWQGTDPSTDFRGGGFISLENLIFFAKKYPDTFQRLLHKLDGNRADWEYPFAVAGINISFMLIQMLDLQSGKPTSQAAVRFLQLLGEDEMAFDNLFCVAFQMMDAQWLAKRASYMEFNDVLKSTRTQLERELELEDVFSVRDLPAYNMLRR* | 321 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi8g00060 | 320 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
| Vivi8g00060 | 320 | MobiDBLite | consensus disorder prediction | 7 | 27 | - | - | |
| Vivi8g00060 | 320 | PANTHER | ENGULFMENT AND CELL MOTILITY | 91 | 317 | IPR050868 | - | |
| Vivi8g00060 | 320 | ProSiteProfiles | ELMO domain profile. | 140 | 301 | IPR006816 | - | |
| Vivi8g00060 | 320 | Pfam | ELMO-CED-12 family | 125 | 290 | IPR006816 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi8g00060 | K23538 | ELMO domain-containing protein |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr1:20870539 | Vivi8g00060 | Vivi-Chr8:1240889 | dispersed | |
| Vivi | Vivi-Chr8:1240889 | Vivi9g00748 | Vivi-Chr9:12006027 | dispersed |