AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi8g00087 ATGCAGCAGCAGCAGCAAACTCAGGCGGCCCGCAACCCAACCTCGGCAGAGTCGACGGCGGAGGCTCCGCCGAAGCAGGTGGCGCTGGCGATGGACCGCTTGGCCCAAGCCGCTCGCCTCATCGCCGATGTCCGCCTTGGCGCTGACCGGCTCCTGGAGGCCCTCTTCGTCTCCGCACAGCCCCACCAGACCACTAAACCGCTCCATCTCTTCCTCAAAGAAGACTCCTCCATGCGCCAACACCTCCAAGATCTTCGCACTATTGGAAAGCAACTGGAAGATTCTGGGGTTCTCAATGAATCTCTTCGGTCACGAAGCAATTCTTGGGGCTTGCATATGCCTTTGGTTTGTCCAGATGGTGCTGTTGTTGCTTATGCTTGGAAACGTCAACTTGCTGGCCAGGCTGGTGCATCTGCCGTTGACAGGACCAGATTAGCTCTAAAGGCCTTTACTGATCAGAAACGGCGGTTTTTCCCTCACCTTGATGATGGATTAAACGGTCAGAGTTCTGCTTCTGAGTCGGTTCCAAAGAAACATTGTGGTTCTCAGATCTCAACAGTTACTCAACAAGAAGAGCTTAGTGATTACAGAACACTATCAGATGTTCTAATGCATGTGGAAAAAGACATGCCAAACATGAAAATTTTCACTTACCAACGATTGGACTGGTTAAAAAGAGCTTCTACACTTCCCTGTTCAGCAGAGGAGTTTTTGATGGATTCATCGAAAGAGCATGACTTTCATATTTCAAATAAACCAAGATTGGGATTGCTGGGTGCTGTTGCTGCTGATAAAGTCGCTGTAATTGAGTTGTTGTTTCCTTCAATATTCAGAGCTATAATATCATTGCACCCAGCTGGTTCTATTGACCCTGATGCTGTAGCTTTCTTCTCTCCAGATGAGGGAGGCAGTTATGTACATGCCAGAGGTTTTTCAGTTTATCATGTATTTAAACATGTCACGGAGCACGCTGCTATGGCCTTGCAACATTTTCTTGGAACCAACACTGAAACAGCATTGTATTCTCTTTTGCACTGGATCTTCAGCTATCAAACCCTATTTACAGAACCTTGCAGTAAATGTAAACGGCTACTGTCAATGGATAGACAATCAGATTTACTGTTACCTCCTGTTTACCATCCTTATCGAAGCTTCTGCGCTATTAAAAGTTCATCTCCCCAATCAATATCCTCAACAAAGAACCAGACTTTGGATGCTTCTCACGCTTATCATGTTGGTTGCTTTTCAGAGGAAGCATAG 1260 46.67 MQQQQQTQAARNPTSAESTAEAPPKQVALAMDRLAQAARLIADVRLGADRLLEALFVSAQPHQTTKPLHLFLKEDSSMRQHLQDLRTIGKQLEDSGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDGLNGQSSASESVPKKHCGSQISTVTQQEELSDYRTLSDVLMHVEKDMPNMKIFTYQRLDWLKRASTLPCSAEEFLMDSSKEHDFHISNKPRLGLLGAVAADKVAVIELLFPSIFRAIISLHPAGSIDPDAVAFFSPDEGGSYVHARGFSVYHVFKHVTEHAAMALQHFLGTNTETALYSLLHWIFSYQTLFTEPCSKCKRLLSMDRQSDLLLPPVYHPYRSFCAIKSSSPQSISSTKNQTLDASHAYHVGCFSEEA* 420
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi8g00087 419 PANTHER 34 KDA TRANSCRIPTIONAL CO-ACTIVATOR-RELATED 4 415 IPR021627 GO:0003713(PANTHER)|GO:0006357(PANTHER)|GO:0016592(PANTHER)|GO:0016592(InterPro)
Vivi8g00087 419 MobiDBLite consensus disorder prediction 161 184 - -
Vivi8g00087 419 MobiDBLite consensus disorder prediction 1 21 - -
Vivi8g00087 419 Pfam Mediator complex subunit 27 312 414 IPR021627 GO:0016592(InterPro)
Vivi8g00087 419 MobiDBLite consensus disorder prediction 1 24 - -
Vivi8g00087 419 MobiDBLite consensus disorder prediction 165 184 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi8g00087 K15170 mediator of RNA polymerase II transcription subunit 27