AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi8g00443 ATGGATTCATCAGTCATGATTTTTATCAAGACCTATTCAAAGAATGAGATCTGGACCTTCTCAACAACATTTGAAATTATGATCCCATGTGGTGGGACCTTTGTTGGTGGATCACCAGACCAGGAATCAGTAGGTTCTGGGACTAAAAGGTCTGGTGCGTCATCAGGTGCTAGGCCACAGAACCGCAAGGAATTTCTCCATAAGTTTGTAGATAGTAAAATCCTCACCAGAAAGCTTGAAGATTGGTTTGAATCAATTTCAGAAAAATCAGCATGTAAAAACCCTGTCTTTGATGTGCCTTTTGAGTTGATTGAACTGCAGAAGTTTGATTATGCATTGGAGGGTGTCCCATTTCAGCAGCTGATTCGAATGCCCAATGCTGTTTATGCCTCAACATCCGATGCAGTGGAAGCAACTGCATATCTAGCTATTGAAGATTTTCTTCATGCAAGTGTGAAGGGCTTGTGGGAGGCATTTTGGAGTCAAGATGAGCCCATGCCTTTTTCTGTTGCATGTTTATACAATGCTAGCCTGAAATTCTACCAGGCCGAGAAAGCAATTGCTAATGGGAAACTTGGAGATCTTTGTGCAACTGTGGAGAGTGATCAGCAGCCTTCTCCATCTGTTCTTGGTGAAGCCCTTTTCTTTGCTGTCCGTATGCTATTATCCAGAAGCCTAAGCAGATTGAATGGTGTCCAGAATTCAAACTGTGTCTTTGTTCTTCTTATTGATTCTCAATATGGAGGGGTTGTAAAAATTGAAGGAGATATAAGTAAATTGGAGTGTGATGTAGATGATATTTATGAATCTGCTGCCGAATGGATTAAAAAACATTCACGAATTTCAGTCTCTCCAATTGATAGAATCTGGAACAAGCTTGGAAATGCTAATTGGGGAGATATTGGTGCTCTACAGGTACTCTTTGCAACCTTCCATTGTATCATGCAATTCGCCGGAATTCCCAAGCACTCAATTGAAGATTTAGCTGCTGACCATGGTTCTCGTCTCCAAACAAGAAGAGTAGAGAGGCAATTGGGAGATACCAGTGTGAATGGGGGTGGTTTATTCCGGTTCCAGCAGCGCAGTGTTTCCCCTGAAATTGTTGAGGTTCAAGAGGAAGCAGTCAAAATTGAGTCTGAAGAGTTGATGAAGCTTGAAGAAAAGCTCTGTTTCTATATGTTGGTTCTCTGGGGGCCGGTTTGGCACCCTTATTTTGTCATTATTGGCTGGGGGCATGCCATTCTAGAAGAGAGGGATCGGCCAGCAATGAATCTTCATTTCTCATCAACTTATGCTCTTCAGGAGGGCAAGTTGTGCTCCGCTTCAGATGCAGAGAGCCTGGTTTATCTACTTTATTTTTCTTGTGGTGGGCTTGTTCCTGACTTGGATTCAGTTGAGGGGGCATTGCATTGGAGAGAGACATCTTGGTCAAGAAGATTAATTCAACAGAAGCTTGGAGATGTCTCAACTGTGTTGAAAGCATTTGCTGATTATGTTGATAGTCTATGTGGGACACCATATCCTATGGACTATGATATATGGCTAAGAAGGTTGAGGAGAAATATTCATGAAGAAGATCATGGAAAGGAAATTGACACATCAGGATAG 1608 42.1 MDSSVMIFIKTYSKNEIWTFSTTFEIMIPCGGTFVGGSPDQESVGSGTKRSGASSGARPQNRKEFLHKFVDSKILTRKLEDWFESISEKSACKNPVFDVPFELIELQKFDYALEGVPFQQLIRMPNAVYASTSDAVEATAYLAIEDFLHASVKGLWEAFWSQDEPMPFSVACLYNASLKFYQAEKAIANGKLGDLCATVESDQQPSPSVLGEALFFAVRMLLSRSLSRLNGVQNSNCVFVLLIDSQYGGVVKIEGDISKLECDVDDIYESAAEWIKKHSRISVSPIDRIWNKLGNANWGDIGALQVLFATFHCIMQFAGIPKHSIEDLAADHGSRLQTRRVERQLGDTSVNGGGLFRFQQRSVSPEIVEVQEEAVKIESEELMKLEEKLCFYMLVLWGPVWHPYFVIIGWGHAILEERDRPAMNLHFSSTYALQEGKLCSASDAESLVYLLYFSCGGLVPDLDSVEGALHWRETSWSRRLIQQKLGDVSTVLKAFADYVDSLCGTPYPMDYDIWLRRLRRNIHEEDHGKEIDTSG* 536
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi8g00443 535 Coils Coil 368 388 - -
Vivi8g00443 535 MobiDBLite consensus disorder prediction 39 58 - -
Vivi8g00443 535 MobiDBLite consensus disorder prediction 39 60 - -
Vivi8g00443 535 PANTHER KINASE FAMILY PROTEIN 199 388 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi8g00443 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Vivi Vivi-Chr7:20183034 Vivi8g00443 Vivi-Chr8:11367701 dispersed