Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi8g00451 | ATGGCTAAGAACAGAGAAGCGTTACTGAAGAAGGAGGTTTGGGAGTATGATGAGAGTTGCCCGGGTTGCAAGATAGACCATCTTAAGGAATCCAACCCTGGTATTCCTTTCAAGCTTTTGTTCTATGTCTGGATTGTGGTTCTATGTGCTGCTTTGCCAATATCATCTCTTTTCCCATTCCTTTATTTCATGATAAGGGACTTCCACATTGCAAAAAGGGAGGAAGATATTGGCTTCTATGCTGGTTATGTAGGATCTTCATTTATGTTTGGAAGAGCTTTGACTTCTGTTATATGGGGAATGGTAGCTGATCGATATGGTCGAAAACCTGTGATAACAGCTGGCTTAATTGCACTGATTATTTTCAACACGCTCTTTGGCCTCAGCACAAATGTTTGGATGGCACTTTCTACAAGGTTTCTTCTTGGAAGTTTTTGTGGTATACTTGGCCCAATGAGGGCATATGCTTCGGAAGTTTGTCGTAAAGAATACCAAGCCTTGGGAATGTCAATTATTAGCACAGCATGGGGCATAGGATTGGTCATTGGTCCAGCTCTTGGAGGTTTTCTTGCCCAGCCTGCAGAAAAATTCCCACACATCTTTTCTAAAGAATCCCTTTTTGGGAGGTTTCCTTACTTTCTACCTTGCCTTCTAATATCGACCTTTGCACTGGGTGTATCTGTTCTCTGTTATTGGCTCCCGGAAACACTGCATATCCATAAGGAAAACAAAGAACAGGATGAGTTATATGCATGGGAGGTAGCAGCATATGGATGTGACGTGAAAGAAAAATTGAAAAAATTTGAAGGAAAAGGTCCAAATCAGCAGCAAAGCCTTCTGAAAAATTGGCCCCTAATGTCATCTATCATTGTATATTGTGTTTTCCAACTTCATGATATGGCATATGCAGAGATATTCTCCTTATGGGCTATTAGTCCTAGCGAGTATGGAGGATTGAGCTATTCAACTGCAGATGTTGGTGAAGTTCTTGCAATGTCAGGATTGGGTCTGCTACTATTTCAGCTATTCCTGTACCCTCCATTGGAGAGGATTCTTGGTCCTGTCATGGTATCTCGCATTGGAGCAGTTTTAACCGTACCATTGCTATCAAGTTACCCCTTAATAGCTATGCTATCTGGTGTCGGGCTCTCATTACTGATCAATTGTGCATCTTTATTGAAGAATGTGCTCTGTGTATCAATTACCACAGGATTGTTCCTTCTGCAAAATAGAGCAGTGACCCAACAACAAAGAGGAGCTGCAAATGGCATTTCTATGTCGGCTATGTCTTTTTTCAAAGCAGTTGGTCCAGCTGGAGGCGGTTCACTCTTCTCTTGGGCCTTAAAGCGTCAGAATGATTCCTTTCTTCCAGGTAGCCGGATGGTTTTCTTTATCCTAAACATAATCGAGGTGCTTGGACTTTTTATGACATTCAAACCTTTTCTAACGGTCCCTGGTGAAAATCATCCCTAA | 1473 | 41.89 | MAKNREALLKKEVWEYDESCPGCKIDHLKESNPGIPFKLLFYVWIVVLCAALPISSLFPFLYFMIRDFHIAKREEDIGFYAGYVGSSFMFGRALTSVIWGMVADRYGRKPVITAGLIALIIFNTLFGLSTNVWMALSTRFLLGSFCGILGPMRAYASEVCRKEYQALGMSIISTAWGIGLVIGPALGGFLAQPAEKFPHIFSKESLFGRFPYFLPCLLISTFALGVSVLCYWLPETLHIHKENKEQDELYAWEVAAYGCDVKEKLKKFEGKGPNQQQSLLKNWPLMSSIIVYCVFQLHDMAYAEIFSLWAISPSEYGGLSYSTADVGEVLAMSGLGLLLFQLFLYPPLERILGPVMVSRIGAVLTVPLLSSYPLIAMLSGVGLSLLINCASLLKNVLCVSITTGLFLLQNRAVTQQQRGAANGISMSAMSFFKAVGPAGGGSLFSWALKRQNDSFLPGSRMVFFILNIIEVLGLFMTFKPFLTVPGENHP* | 491 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi8g00451 | 490 | Pfam | Major Facilitator Superfamily | 43 | 437 | IPR011701 | GO:0022857(InterPro)|GO:0055085(InterPro) | |
| Vivi8g00451 | 490 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 39 | 485 | IPR020846 | GO:0022857(InterPro) | |
| Vivi8g00451 | 490 | Gene3D | MFS general substrate transporter like domains | 38 | 478 | IPR036259 | - | |
| Vivi8g00451 | 490 | CDD | MFS-SLC46-TetA-like | 43 | 479 | - | - | |
| Vivi8g00451 | 490 | SUPERFAMILY | MFS general substrate transporter | 38 | 479 | IPR036259 | - | |
| Vivi8g00451 | 490 | FunFam | Protein ZINC INDUCED FACILITATOR-LIKE 1 | 38 | 477 | - | - | |
| Vivi8g00451 | 490 | PANTHER | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 | 35 | 479 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi8g00451 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr13:15369916 | Vivi8g00451 | Vivi-Chr8:11436840 | dispersed | |
| Vivi | Vivi-Chr13:15444112 | Vivi8g00451 | Vivi-Chr8:11436840 | dispersed |