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AGRP

Asteraceae Genomic Research Platform

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Example:
Example:

Transposable Elements (TEs) Pipeline

Comprehensive Workflow for TE Annotation and Analysis

01

De novo Prediction

De novo prediction of repetitive sequences in genomes using RepeatModeler.

Visit RepeatModeler
02

Classifying Transposons

Classifying transposons using deep learning models with DeepTE.

Visit DeepTE
03

Mask Repeat Sequences

Mask repeat sequences using a repeat sequence database with RepeatMasker.

Visit RepeatMasker