Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

WGD Identification Pipeline

A Standardized Workflow for Whole Genome Duplication Analysis

Reconstruct phylogenetic relationships using Maximum Likelihood methods to infer lineage divergence.

Identify homologous gene pairs and syntenic regions across genomes.

Visualize syntenic relationships and alignments using dotplots (B-Dotter).

Define and refine synteny blocks (BB-Dotter) for structural analysis.

Identify and visualize polyploidization events using Ks-dotplots.

Infer the age of duplication events by calculating and plotting Ks distribution.