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AGRP

Asteraceae Genomic Research Platform

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Hierarchical alignments with the Arctium lappa genome as reference

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Asteraceae genomes. We used Arctium lappa as a reference, and by comparing homologous gene locus maps and Ks values between Arctium lappa and other Asteraceae, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We constructed a 74×31,441 macro-matrices.


Select Armi_1 Sain_1 Ceso_1 Cati_1 Ccar_1 Cien_1 Cich_1 Lssa_1 Laca_1 Tako_1 Tamo_1 Pslu_1 Lomi_1 Lomi_2 Enbr_1 Ecan_1 Soca_1 Glco_1 Artr_1 Aary_1 Aary_2 Aann_1 Chma_1 Chmo_1 Chmo_2 Chmo_3 Chla_1 Chna_1 Cind_1 Pdy_1 Cobi_1 Hean_1 Bial_1 Bial_2 Dapi_1 Dapi_2 Hetu_1 Hetu_2 Hetu_3 Amtr_1 Smso_1 Smso_2 Taer_1 Fro_1 Fso_1 Ftr_1 Fra_1 Fli_1 Stre_1 Mimi_1 Cobi_2 Hean_2 Bial_3 Bial_4 Dapi_3 Dapi_4 Hetu_4 Hetu_5 Hetu_6 Amtr_2 Smso_3 Smso_4 Taer_2 Fro_2 Fso_2 Ftr_2 Fra_2 Fli_2 Stre_2 Mimi_2
Armi18g00068 Sain8g02088 Ceso1g00040 Cati1g00066 Ccar5g01577 Cien7g02508 . Lssa3g03550 Laca3g02785 Tako6g02919 Tamo6g02478 Pslu2g14092 Lomi6g01967 Lomi7g01737 Enbr1g09181 Ecan8g02642 Soca4g03364 Glco7g02047 . Aary7g02328 Aary15g02231 Aann3g01601 . . . . . . . Pdy3g03064 Cobi3g02250 Hean15g01311 . Bial5g03068 Dapi30g00601 Dapi14g00579 . . . . Smso2g00949 . Taer5g00720 Fro11g01668 Fso10g02365 . Fra7g01709 Fli2g01971 . . . . . . . . . . . . . . . . . . . . . .
Armi18g00067 Sain8g02087 Ceso1g00039 Cati1g00065 Ccar5g01578 Cien7g02510 Cich8g01625 Lssa3g03551 Laca3g02786 . Tamo6g02479 Pslu2g14091 Lomi6g01965 Lomi7g01736 . . . Glco7g02057 Artr9g04594 Aary7g02329 Aary15g02232 Aann3g01602 . . . . . . . Pdy3g03065 Cobi3g02251 Hean15g01312 Bial14g01356 Bial5g03067 Dapi30g00600 Dapi14g00578 Hetu43g01387 Hetu45g01419 Hetu44g01322 Amtr08g03963 Smso2g00948 Smso23g00561 Taer5g00719 Fro11g01667 Fso10g02366 Ftr12g02534 Fra7g01710 Fli2g01970 Stre11g01632 Mimi1g01837 . . . . . . . . . . . . . . . . . . . .
Armi18g00066 Sain8g02086 . Cati1g00064 Ccar5g01579 Cien7g02512 Cich8g01626 Lssa3g03556 Laca3g02787 Tako6g02941 Tamo6g02483 Pslu2g13606 Lomi6g01964 Lomi7g01735 Enbr1g09180 Ecan8g02644 Soca4g03365 Glco7g02058 Artr9g04595 Aary7g02330 Aary15g02233 Aann3g01603 . . . . . . . Pdy3g03066 Cobi3g02253 Hean15g01316 Bial14g01355 . Dapi30g00599 Dapi14g00577 Hetu43g01389 Hetu45g01420 Hetu44g01324 Amtr08g03964 Smso2g00947 Smso23g00560 . . . Ftr12g02535 . Fli2g01968 Stre11g01633 Mimi1g01838 . . . . . . . . . . . . . . . . . . . .
Armi18g00065 Sain8g02084 Ceso1g00038 Cati1g00063 Ccar5g01580 Cien7g02515 Cich8g01632 Lssa3g03566 Laca3g02794 Tako6g02947 . Pslu2g14077 Lomi6g01962 Lomi7g01734 . Ecan8g02646 Soca4g03367 Glco7g02060 Artr9g04605 Aary7g02334 Aary15g02235 Aann3g01609 Chma3g03559 . . . Chla9g03740 Chna8g00986 Cind9g04270 Pdy3g03069 Cobi3g02257 Hean15g01320 . . Dapi30g00598 Dapi14g00576 . . . Amtr08g03978 . . Taer5g00716 Fro11g01664 Fso10g02369 Ftr12g02540 Fra7g01713 Fli2g01964 Stre11g01636 . . . . . . . . . . . . . . . . . . . . .
Armi18g00063 Sain8g02082 Ceso1g00036 Cati1g00061 Ccar5g01581 Cien7g02516 Cich8g01633 Lssa3g03567 Laca3g02795 . . Pslu2g14075 Lomi6g01961 Lomi7g01732 . Ecan8g02647 Soca4g03368 . Artr9g04606 Aary7g02336 Aary15g02236 Aann3g01611 . . . . . . . Pdy3g03070 Cobi3g02258 Hean15g01321 Bial14g01350 . Dapi30g00596 Dapi14g00573 Hetu43g01399 Hetu45g01425 Hetu44g01328 Amtr08g03979 Smso2g00943 Smso23g00556 Taer5g00715 Fro11g01663 Fso10g02370 Ftr12g02541 Fra7g01714 Fli2g01963 Stre11g01637 Mimi1g01840 . . . . . . . . . . . . . . . . . . . .
Armi18g00060 Sain8g02078 . . Ccar5g01582 Cien7g02517 Cich8g01635 Lssa3g03569 Laca3g02797 . . Pslu2g14068 Lomi6g01960 Lomi7g01731 Enbr1g09177 Ecan8g02648 Soca4g03369 Glco7g02061 Artr9g04607 Aary7g02338 Aary15g02237 Aann3g01612 Chma3g03561 Chmo25g01434 . Chmo27g01223 Chla9g03738 Chna8g00987 Cind9g04272 Pdy3g03072 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi18g00059 Sain8g02074 . . . Cien7g02519 Cich8g01639 Lssa3g03570 Laca3g02802 Tako6g02950 Tamo6g02494 Pslu2g14019 . Lomi7g01730 . . . Glco7g02063 Artr9g04610 Aary7g02344 . Aann3g01614 Chma3g03565 Chmo25g01435 . Chmo27g01222 Chla9g03736 Chna8g00989 Cind9g04273 Pdy3g03073 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi18g00058 Sain8g02070 . . . . . . . . . Pslu2g14001 . Lomi7g01729 Enbr1g09176 Ecan8g02649 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
. . . . Ccar5g01622 Cien7g02521 Cich8g01640 Lssa3g03571 Laca3g02803 . . . . . . Ecan8g02650 Soca4g03370 Glco7g02064 Artr9g04622 Aary7g02345 Aary15g02240 Aann3g01615 Chma3g03567 Chmo25g01436 Chmo26g01566 Chmo27g01220 Chla9g03734 Chna8g00991 Cind9g04275 . Cobi8g02655 Hean15g01330 Bial14g01348 Bial5g03062 . . . . Hetu44g01337 . Smso2g00941 . . . . . . . Stre11g01638 . . . . . . . . . . . . . . . . . . . . .
Armi18g00057 Sain8g02069 . . Ccar5g01622 Cien7g02522 Cich8g01641 Lssa3g03572 Laca3g02804 Tako6g02951 Tamo6g02495 Pslu2g14000 . Lomi7g01728 Enbr1g09174 Ecan8g02652 Soca4g03372 Glco7g02067 Artr9g04625 Aary7g02347 Aary15g02242 Aann3g01617 . Chmo25g01439 Chmo26g01570 Chmo27g01218 Chla9g03731 Chna8g00993 Cind9g04277 Pdy3g03074 Cobi3g02261 Hean15g01331 Bial14g01347 Bial5g03061 Dapi30g00594 Dapi14g00572 Hetu43g01407 Hetu45g01432 . Amtr08g03990 Smso2g00940 Smso23g00554 Taer5g00713 Fro11g01661 Fso10g02372 . Fra7g01716 Fli2g01961 Stre11g01639 Mimi1g01841 . . . . . . . . . . . . . . . . . . . .
   
Gene_GFF
Select Chromosome Start End Strand Old_gene Gene Num
3 101070393 101072879 + chr3g0635531 Aann3g01601 1601
3 101074881 101081158 + chr3g0635541 Aann3g01602 1602
3 101085068 101092900 + chr3g0635551 Aann3g01603 1603
3 101377236 101378790 + chr3g0635731 Aann3g01609 1609
3 101382381 101383408 - chr3g0635751 Aann3g01611 1611
3 101384121 101391583 - chr3g0635761 Aann3g01612 1612
3 101495478 101499695 - chr3g0635831 Aann3g01614 1614
3 101548581 101552738 + chr3g0635861 Aann3g01615 1615
3 101596041 101602148 - chr3g0635891 Aann3g01617 1617
7 200623148 200625370 + Aargg7g23280.1 Aary7g02328 2328
7 200627667 200632905 + Aargg7g23290.1 Aary7g02329 2329
7 200647424 200650323 + Aargg7g23300.1 Aary7g02330 2330
7 200877190 200886872 + Aargg7g23340.1 Aary7g02334 2334
7 200890800 200891531 - Aargg7g23360.1 Aary7g02336 2336
7 200952870 200960092 + Aargg7g23380.1 Aary7g02338 2338
7 201719413 201720270 - Aargg7g23440.1 Aary7g02344 2344
7 201800461 201802824 + Aargg7g23450.1 Aary7g02345 2345
7 201924801 201931016 - Aargg7g23470.1 Aary7g02347 2347
15 172539864 172542507 + Aargg15g22310.1 Aary15g02231 2231
15 172544792 172551815 + Aargg15g22320.1 Aary15g02232 2232
15 172562558 172565344 + Aargg15g22330.1 Aary15g02233 2233
15 172696256 172698873 + Aargg15g22350.1 Aary15g02235 2235
15 172699423 172700154 - Aargg15g22360.1 Aary15g02236 2236
15 172701809 172708834 - Aargg15g22370.1 Aary15g02237 2237
15 173055837 173058192 + Aargg15g22400.1 Aary15g02240 2240
15 173128327 173133932 - Aargg15g22420.1 Aary15g02242 2242
8 106793140 106793982 + AtrifAMIRv0_Chr08g0555451 Amtr08g03963 3963
8 106820597 106822974 + AtrifAMIRv0_Chr08g0555461 Amtr08g03964 3964
8 107019074 107021568 + AtrifAMIRv0_Chr08g0555601 Amtr08g03978 3978
8 107022340 107023098 - AtrifAMIRv0_Chr08g0555611 Amtr08g03979 3979
8 107232214 107237672 - AtrifAMIRv0_Chr08g0555721 Amtr08g03990 3990
18 744363 751612 + AmiAMIRv0_Chr18g0469901 Armi18g00057 57
18 758351 760924 + AmiAMIRv0_Chr18g0469911 Armi18g00058 58
18 765664 766656 + AmiAMIRv0_Chr18g0469921 Armi18g00059 59
18 783777 790667 + AmiAMIRv0_Chr18g0469931 Armi18g00060 60
18 1312350 1313105 + AmiAMIRv0_Chr18g0469961 Armi18g00063 63
18 1320005 1323378 - AmiAMIRv0_Chr18g0469981 Armi18g00065 65
18 1337339 1340087 - AmiAMIRv0_Chr18g0469991 Armi18g00066 66
18 1347723 1348565 + AmiAMIRv0_Chr18g0470001 Armi18g00067 67
18 1352025 1356689 - AmiAMIRv0_Chr18g0470011 Armi18g00068 68
9 182414924 182415766 + AtridAMIRv0_Chr09g1091371 Artr9g04594 4594
9 182431535 182434300 + AtridAMIRv0_Chr09g1091381 Artr9g04595 4595
9 182690135 182693103 + AtridAMIRv0_Chr09g1091481 Artr9g04605 4605
9 182693657 182694388 - AtridAMIRv0_Chr09g1091491 Artr9g04606 4606
9 182696025 182702669 - AtridAMIRv0_Chr09g1091501 Artr9g04607 4607
9 182925851 182926651 - AtridAMIRv0_Chr09g1091531 Artr9g04610 4610
9 183422579 183425794 + AtridAMIRv0_Chr09g1091651 Artr9g04622 4622
9 183524805 183530201 - AtridAMIRv0_Chr09g1091681 Artr9g04625 4625
5 76749597 76756016 + g94531.t1 Bial5g03061 3061
5 76757439 76760766 - g94532.t1 Bial5g03062 3062
5 76798155 76800382 + g94537.t1 Bial5g03067 3067
5 76802873 76806219 - g94538.t1 Bial5g03068 3068
14 25103998 25109413 + g101453.t1 Bial14g01347 1347
14 25110689 25112209 - g101454.t1 Bial14g01348 1348
14 25145408 25145887 + g101456.t1 Bial14g01350 1350
14 25301004 25303961 - g101461.t1 Bial14g01355 1355
14 25328111 25328953 + g101462.t1 Bial14g01356 1356
1 394040 394795 + CtAH01T0004300.1 Cati1g00061 61
1 401355 410986 - CtAH01T0004400.1 Cati1g00063 63
1 420552 426871 - CtAH01T0004500.1 Cati1g00064 64
1 431371 432213 + CtAH01T0004600.1 Cati1g00065 65
1 437105 442735 - CtAH01T0004700.1 Cati1g00066 66
5 36888802 36894637 + gnl|WGS:LEKV|Ccrd_019272.mRNA.1_mrna Ccar5g01577 1577
5 36895275 36898593 - gnl|WGS:LEKV|Ccrd_019273.mRNA.1_mrna Ccar5g01578 1578
5 36904555 36907353 + gnl|WGS:LEKV|Ccrd_019274.mRNA.1_mrna Ccar5g01579 1579
5 36920467 36933820 + gnl|WGS:LEKV|Ccrd_019275.mRNA.1_mrna Ccar5g01580 1580
5 36935052 36935807 - gnl|WGS:LEKV|Ccrd_019276.mRNA.1_mrna Ccar5g01581 1581
5 36937683 36946259 - gnl|WGS:LEKV|Ccrd_019277.mRNA.1_mrna Ccar5g01582 1582
5 37184168 37191923 + gnl|WGS:LEKV|Ccrd_019317.mRNA.1_mrna Ccar5g01622 1622
1 408343 409116 + >KAJ9564318.1 Ceso1g00036 36
1 423116 425838 - >KAJ9564325.1 Ceso1g00038 38
1 450883 451725 + >KAJ9564317.1 Ceso1g00039 39
1 455058 461035 - >KAJ9564323.1 Ceso1g00040 40
9 134095404 134101455 + ClaG1_Chr09g0616921 Chla9g03731 3731
9 134128833 134131225 - ClaG1_Chr09g0616951 Chla9g03734 3734
9 134468637 134470215 + ClaG1_Chr09g0616971 Chla9g03736 3736
9 134569246 134576420 + ClaG1_Chr09g0616991 Chla9g03738 3738
9 134578769 134581699 - ClaG1_Chr09g0617011 Chla9g03740 3740
3 147676122 147678689 + CmaNakai_Chr03g0265191 Chma3g03559 3559
3 147682741 147688703 - CmaNakai_Chr03g0265211 Chma3g03561 3561
3 147897946 147898794 - CmaNakai_Chr03g0265251 Chma3g03565 3565
3 148039704 148042118 + CmaNakai_Chr03g0265271 Chma3g03567 3567
25 120680412 120688276 - evm.model.scaffold_717.55 Chmo25g01434 1434
25 120795774 120799266 - evm.model.scaffold_717.54 Chmo25g01435 1435
25 121049371 121051770 + evm.model.scaffold_717.44 Chmo25g01436 1436
25 121092543 121098055 - evm.model.scaffold_717.41 Chmo25g01439 1439
26 132337491 132338062 + evm.model.scaffold_11656.2 Chmo26g01566 1566
26 132389074 132395663 - evm.model.scaffold_11656.7 Chmo26g01570 1570
27 99843943 99849356 + evm.model.scaffold_1561.126 Chmo27g01218 1218
27 99856426 99858819 - evm.model.scaffold_1561.123 Chmo27g01220 1220
27 100207415 100211372 + evm.model.scaffold_1561.104 Chmo27g01222 1222
27 100371012 100378059 + evm.model.scaffold_1561.99 Chmo27g01223 1223
8 96890490 96893511 + Cn0527200 Chna8g00986 986
8 96896033 96902732 - Cn0527190 Chna8g00987 987
8 97140406 97141266 - Cn0527150 Chna8g00989 989
8 97414536 97422900 + Cn0527130 Chna8g00991 991
8 97441717 97447485 - Cn0527100 Chna8g00993 993
8 53798084 53798914 - KAI3699871.1 Cich8g01625 1625
8 53864786 53867557 + KAI3699872.1 Cich8g01626 1626
8 54304189 54310362 + KAI3699878.1 Cich8g01632 1632
8 54310592 54311347 - KAI3699879.1 Cich8g01633 1633
8 54336164 54341169 - KAI3699881.1 Cich8g01635 1635
8 54458735 54459607 - KAI3699885.1 Cich8g01639 1639
8 54496635 54498672 + KAI3699886.1 Cich8g01640 1640
8 54500607 54506876 - KAI3699887.1 Cich8g01641 1641
7 37845782 37848723 + KAI3503533.1 Cien7g02508 2508
7 37859874 37860704 - KAI3503535.1 Cien7g02510 2510
7 37879706 37882400 + KAI3503537.1 Cien7g02512 2512
7 37960171 37965348 + KAI3503540.1 Cien7g02515 2515
7 37965572 37966327 - KAI3503541.1 Cien7g02516 2516
7 37990196 37994762 - KAI3503542.1 Cien7g02517 2517
7 38040557 38041432 - KAI3503544.1 Cien7g02519 2519
7 38059341 38062186 + KAI3503546.1 Cien7g02521 2521
7 38066721 38074930 - KAI3503547.1 Cien7g02522 2522
9 148677283 148679872 + D.indicum_Contig82_G00103.t1 Cind9g04270 4270
9 148682811 148689181 - D.indicum_Contig82_G00105.t1 Cind9g04272 4272
9 148784650 148785514 - D.indicum_Contig82_G00106.t1 Cind9g04273 4273
9 149031218 149033617 + D.indicum_Contig82_G00108.t1 Cind9g04275 4275
9 149059389 149064805 - D.indicum_Contig82_G00110.t1 Cind9g04277 4277
3 70201614 70202059 + h2tg000002l_1.g22321.t1 Cobi3g02250 2250
3 70202710 70204473 - h2tg000002l_1.g22320.t1 Cobi3g02251 2251
3 70255105 70257312 + h2tg000002l_1.g22318.t1 Cobi3g02253 2253
3 70390057 70391371 + h2tg000002l_1.g22314.t1 Cobi3g02257 2257
3 70392160 70392909 - h2tg000002l_1.g22313.t1 Cobi3g02258 2258
3 70423468 70428703 - h2tg000002l_1.g22310.t1 Cobi3g02261 2261
8 75901607 75903410 + h2tg000049l_1.g25216.t1 Cobi8g02655 2655
14 10318325 10323382 + h2tg000265l.g78822.t1 Dapi14g00572 572
14 10332053 10332805 + h2tg000265l.g78821.t1 Dapi14g00573 573
14 10354959 10363117 - h2tg000265l.g78818.t1 Dapi14g00576 576
14 10422507 10425223 - h2tg000265l.g78817.t1 Dapi14g00577 577
14 10449911 10450753 + h2tg000265l.g78816.t1 Dapi14g00578 578
14 10453207 10455246 - h2tg000265l.g78815.t1 Dapi14g00579 579
30 10109505 10114544 + h1tg000008l.g131304.t1 Dapi30g00594 594
30 10132343 10133095 + h1tg000008l.g131306.t1 Dapi30g00596 596
30 10138236 10143024 - h1tg000008l.g131308.t1 Dapi30g00598 598
30 10183897 10186545 - h1tg000008l.g131309.t1 Dapi30g00599 599
30 10201587 10202429 + h1tg000008l.g131310.t1 Dapi30g00600 600
30 10204833 10207782 - h1tg000008l.g131311.t1 Dapi30g00601 601
8 37416294 37418615 + XM_043782796.1 Ecan8g02642 2642
8 37424775 37429381 + XM_043750533.1 Ecan8g02644 2644
8 37453686 37457100 + XM_043751909.1 Ecan8g02646 2646
8 37457215 37458142 - XM_043752635.1 Ecan8g02647 2647
8 37461318 37468396 - XM_043783092.1 Ecan8g02648 2648
8 37471010 37475752 + XM_043750393.1 Ecan8g02649 2649
8 37471019 37475752 + XM_043750394.1 Ecan8g02650 2650
8 37483099 37489006 - XM_043752250.1 Ecan8g02652 2652
1 285016210 285021713 + evm.model.ctg88.12 Enbr1g09174 9174
1 285044457 285048979 - evm.model.ctg88.10 Enbr1g09176 9176
1 285078487 285085048 + evm.model.ctg88.9 Enbr1g09177 9177
1 285174453 285177494 - evm.model.ctg88.5 Enbr1g09180 9180
1 285194414 285196388 - evm.model.ctg88.4 Enbr1g09181 9181
2 35732094 35737546 + FliAMIRv0_Chr02g0053851 Fli2g01961 1961
2 35749458 35750213 + FliAMIRv0_Chr02g0053871 Fli2g01963 1963
2 35750623 35753936 - FliAMIRv0_Chr02g0053881 Fli2g01964 1964
2 35794568 35794852 - FliAMIRv0_Chr02g0053921 Fli2g01968 1968
2 35827769 35828611 + FliAMIRv0_Chr02g0053941 Fli2g01970 1970
2 35830754 35832759 - FliAMIRv0_Chr02g0053951 Fli2g01971 1971
7 74484588 74486501 + FraAMIRv0_Chr07g0115731 Fra7g01709 1709
7 74488436 74489278 - FraAMIRv0_Chr07g0115741 Fra7g01710 1710
7 74519175 74522771 + FraAMIRv0_Chr07g0115771 Fra7g01713 1713
7 74523194 74523949 - FraAMIRv0_Chr07g0115781 Fra7g01714 1714
7 74530232 74536114 - FraAMIRv0_Chr07g0115801 Fra7g01716 1716
11 15031996 15037945 + FroAMIRv0_Chr11g0177051 Fro11g01661 1661
11 15044215 15044970 + FroAMIRv0_Chr11g0177071 Fro11g01663 1663
11 15045382 15048714 - FroAMIRv0_Chr11g0177081 Fro11g01664 1664
11 15084409 15085251 + FroAMIRv0_Chr11g0177111 Fro11g01667 1667
11 15087355 15089532 - FroAMIRv0_Chr11g0177121 Fro11g01668 1668
10 65677599 65679599 + FsoAMIRv0_Chr10g0240811 Fso10g02365 2365
10 65681761 65682603 - FsoAMIRv0_Chr10g0240821 Fso10g02366 2366
10 65730174 65733546 + FsoAMIRv0_Chr10g0240851 Fso10g02369 2369
10 65733967 65734722 - FsoAMIRv0_Chr10g0240861 Fso10g02370 2370
10 65739881 65745339 - FsoAMIRv0_Chr10g0240881 Fso10g02372 2372
12 88741240 88742082 - FtrAMIRv0_Chr12g0356441 Ftr12g02534 2534
12 88761712 88764094 + FtrAMIRv0_Chr12g0356451 Ftr12g02535 2535
12 88829530 88833105 + FtrAMIRv0_Chr12g0356501 Ftr12g02540 2540
12 88833527 88834282 - FtrAMIRv0_Chr12g0356511 Ftr12g02541 2541
7 341759920 341761843 + GcoAMIRv0_Chr07g0468321 Glco7g02047 2047
7 342088270 342089981 + GcoAMIRv0_Chr07g0468421 Glco7g02057 2057
7 342139439 342142172 + GcoAMIRv0_Chr07g0468431 Glco7g02058 2058
7 342294543 342297138 + GcoAMIRv0_Chr07g0468451 Glco7g02060 2060
7 342299668 342306534 - GcoAMIRv0_Chr07g0468461 Glco7g02061 2061
7 342511107 342511958 - GcoAMIRv0_Chr07g0468481 Glco7g02063 2063
7 342583188 342586178 + GcoAMIRv0_Chr07g0468491 Glco7g02064 2064
7 342809085 342814404 - GcoAMIRv0_Chr07g0468521 Glco7g02067 2067
15 32013800 32016718 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0685921 Hean15g01311 1311
15 32016582 32020455 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0685931 Hean15g01312 1312
15 32088553 32092607 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0685971 Hean15g01316 1316
15 32223891 32228945 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0686011 Hean15g01320 1320
15 32231569 32232327 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0686021 Hean15g01321 1321
15 32377790 32378948 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0686121 Hean15g01330 1330
15 32379000 32385309 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0686131 Hean15g01331 1331
43 97132721 97134102 - >Htub.h1tg003716l.g250.t1 Hetu43g01387 1387
43 97306781 97309649 + >Htub.h1tg003716l.g248.t1 Hetu43g01389 1389
43 97540778 97541536 - >Htub.h1tg003716l.g238.t1 Hetu43g01399 1399
43 97726695 97727302 - >Htub.h1tg003716l.g230.t1 Hetu43g01407 1407
44 84212843 84214255 - >Htub.h1tg001734l.g475.t1 Hetu44g01322 1322
44 84245389 84248250 + >Htub.h1tg001734l.g473.t1 Hetu44g01324 1324
44 84356904 84357662 - >Htub.h1tg001734l.g469.t1 Hetu44g01328 1328
44 84790485 84791375 + >Htub.h1tg001734l.g460.t1 Hetu44g01337 1337
45 93532178 93533020 - >Htub.h1tg003389l.g189.t1 Hetu45g01419 1419
45 93622380 93625252 + >Htub.h1tg003389l.g190.t1 Hetu45g01420 1420
45 93833568 93834326 - >Htub.h1tg003389l.g195.t1 Hetu45g01425 1425
45 94020688 94021804 - >Htub.h1tg003389l.g202.t1 Hetu45g01432 1432
3 116164011 116167118 + CAI9277146.1 Laca3g02785 2785
3 116168820 116169662 - CAI9277147.1 Laca3g02786 2786
3 116272088 116275494 + CAI9277148.1 Laca3g02787 2787
3 116951301 116956529 + CAI9277155.1 Laca3g02794 2794
3 116956590 116957345 - CAI9277156.1 Laca3g02795 2795
3 117044048 117049590 - CAI9277158.1 Laca3g02797 2797
3 117326105 117326971 - CAI9277164.1 Laca3g02802 2802
3 117336621 117339796 + CAI9277165.1 Laca3g02803 2803
3 117341889 117347782 - CAI9277166.1 Laca3g02804 2804
6 27673852 27681864 + LmiAMIRv0_Chr06g0205981 Lomi6g01960 1960
6 27683961 27684716 + LmiAMIRv0_Chr06g0205991 Lomi6g01961 1961
6 27689340 27692599 - LmiAMIRv0_Chr06g0206001 Lomi6g01962 1962
6 27713588 27716271 - LmiAMIRv0_Chr06g0206021 Lomi6g01964 1964
6 27743058 27743900 + LmiAMIRv0_Chr06g0206031 Lomi6g01965 1965
6 27761430 27763462 - LmiAMIRv0_Chr06g0206051 Lomi6g01967 1967
7 27830068 27835281 + LmiAMIRv0_Chr07g0231981 Lomi7g01728 1728
7 27837454 27839663 - LmiAMIRv0_Chr07g0231991 Lomi7g01729 1729
7 27853488 27854300 + LmiAMIRv0_Chr07g0232001 Lomi7g01730 1730
7 27870594 27878230 + LmiAMIRv0_Chr07g0232011 Lomi7g01731 1731
7 27884336 27885103 + LmiAMIRv0_Chr07g0232021 Lomi7g01732 1732
7 27889510 27892513 - LmiAMIRv0_Chr07g0232041 Lomi7g01734 1734
7 27918078 27920955 - LmiAMIRv0_Chr07g0232051 Lomi7g01735 1735
7 27934346 27935188 + LmiAMIRv0_Chr07g0232061 Lomi7g01736 1736
7 27943302 27946491 - LmiAMIRv0_Chr07g0232071 Lomi7g01737 1737
3 205154854 205155996 + >KAJ0219414.1 Lssa3g03550 3550
3 205160315 205162814 - >KAJ0215123.1 Lssa3g03551 3551
3 205320279 205323253 + >KAJ0215651.1 Lssa3g03556 3556
3 206171320 206176105 + >KAJ0216353.1 Lssa3g03566 3566
3 206176335 206177090 - >KAJ0215852.1 Lssa3g03567 3567
3 206504792 206510070 - >KAJ0219470.1 Lssa3g03569 3569
3 206662874 206663740 - >KAJ0217670.1 Lssa3g03570 3570
3 206713501 206717083 + >KAJ0215888.1 Lssa3g03571 3571
3 206717789 206723155 - >KAJ0218927.1 Lssa3g03572 3572
1 89340269 89341111 - KAD7478701.1 Mimi1g01837 1837
1 89359937 89363056 + KAD7478702.1 Mimi1g01838 1838
1 89405775 89406476 - KAD7478704.1 Mimi1g01840 1840
1 89418186 89424642 - KAD7478705.1 Mimi1g01841 1841
3 88201025 88203776 + PdyAMIRv0_Chr03g0129031 Pdy3g03064 3064
3 88211264 88212106 - PdyAMIRv0_Chr03g0129041 Pdy3g03065 3065
3 88227208 88229560 + PdyAMIRv0_Chr03g0129051 Pdy3g03066 3066
3 88314461 88316942 + PdyAMIRv0_Chr03g0129081 Pdy3g03069 3069
3 88317363 88318118 - PdyAMIRv0_Chr03g0129091 Pdy3g03070 3070
3 88327098 88333579 - PdyAMIRv0_Chr03g0129111 Pdy3g03072 3072
3 88366451 88367275 - PdyAMIRv0_Chr03g0129121 Pdy3g03073 3073
3 88386859 88392815 - PdyAMIRv0_Chr03g0129131 Pdy3g03074 3074
2 101576500 101578371 - PluAMIRv0_Chr02g0356521 Pslu2g13606 13606
2 104216884 104221441 + PluAMIRv0_Chr02g0360451 Pslu2g14000 14000
2 104223214 104225300 - PluAMIRv0_Chr02g0360461 Pslu2g14001 14001
2 104305215 104306042 + PluAMIRv0_Chr02g0360641 Pslu2g14019 14019
2 104619938 104626179 + PluAMIRv0_Chr02g0361131 Pslu2g14068 14068
2 104648868 104649626 + PluAMIRv0_Chr02g0361201 Pslu2g14075 14075
2 104654475 104657544 - PluAMIRv0_Chr02g0361221 Pslu2g14077 14077
2 104798735 104799577 + PluAMIRv0_Chr02g0361361 Pslu2g14091 14091
2 104809137 104811280 - PluAMIRv0_Chr02g0361371 Pslu2g14092 14092
8 137416586 137424632 + SinAMIRv0_Chr08g0198021 Sain8g02069 2069
8 137428464 137432598 - SinAMIRv0_Chr08g0198031 Sain8g02070 2070
8 137555029 137555982 + SinAMIRv0_Chr08g0198071 Sain8g02074 2074
8 137805410 137815256 + SinAMIRv0_Chr08g0198111 Sain8g02078 2078
8 137968305 137969060 + SinAMIRv0_Chr08g0198151 Sain8g02082 2082
8 137976711 137980763 - SinAMIRv0_Chr08g0198171 Sain8g02084 2084
8 138091487 138095647 - SinAMIRv0_Chr08g0198191 Sain8g02086 2086
8 138112741 138113583 + SinAMIRv0_Chr08g0198201 Sain8g02087 2087
8 138116117 138121139 - SinAMIRv0_Chr08g0198211 Sain8g02088 2088
2 14619918 14625615 + KAI3823973.1 Smso2g00940 940
2 14628736 14629953 - KAI3823974.1 Smso2g00941 941
2 14662728 14663483 + KAI3823976.1 Smso2g00943 943
2 14711384 14714597 - KAI3823980.1 Smso2g00947 947
2 14748498 14749340 + KAI3823981.1 Smso2g00948 948
2 14751223 14756256 - KAI3823982.1 Smso2g00949 949
23 11561959 11567780 + KAI3716954.1 Smso23g00554 554
23 11590598 11591356 + KAI3716956.1 Smso23g00556 556
23 11627376 11630590 - KAI3716960.1 Smso23g00560 560
23 11638431 11639273 + KAI3716961.1 Smso23g00561 561
4 63985659 63987821 + augustus55939.t01 Soca4g03364 3364
4 63998652 64002065 + augustus55938.t01 Soca4g03365 3365
4 64029862 64033592 + transfrag37629.t01 Soca4g03367 3367
4 64033751 64034588 - augustus55935.t01 Soca4g03368 3368
4 64041980 64049474 - asmbl_6659.p1 Soca4g03369 3369
4 64051933 64058351 + transfrag37626.t01 Soca4g03370 3370
4 64067739 64073094 - transfrag37624.t01 Soca4g03372 3372
11 90230551 90232374 - Streb.11G016320.1 Stre11g01632 1632
11 90236575 90241196 + Streb.11G016330.1 Stre11g01633 1633
11 90325782 90329881 + Streb.11G016360.1 Stre11g01636 1636
11 90330273 90331216 - Streb.11G016370.1 Stre11g01637 1637
11 90399294 90400474 + Streb.11G016380.1 Stre11g01638 1638
11 90400563 90406649 - Streb.11G016390.1 Stre11g01639 1639
5 6139077 6143760 + >KAK1423242.1 Taer5g00713 713
5 6149459 6150199 + >KAK1423244.1 Taer5g00715 715
5 6151078 6153229 - >KAK1423245.1 Taer5g00716 716
5 6181154 6181996 + >KAK1423248.1 Taer5g00719 719
5 6184825 6187711 - >KAK1423249.1 Taer5g00720 720
6 52850430 52853082 + TkA06G203570.1 Tako6g02919 2919
6 53537907 53543182 + TkA06G206500.1 Tako6g02941 2941
6 53715888 53721247 + TkA06G207200.1 Tako6g02947 2947
6 53999664 54001832 - TkA06G208160.1 Tako6g02950 2950
6 54012286 54017140 - TkA06G208200.1 Tako6g02951 2951
6 39407910 39410184 + TbA06G061720.1 Tamo6g02478 2478
6 39416984 39424638 - TbA06G061710.1 Tamo6g02479 2479
6 39594005 39599060 + TbA06G061520.1 Tamo6g02483 2483
6 39932749 39935735 - TbA06G061150.1 Tamo6g02494 2494
6 39943899 39946605 - TbA06G061130.1 Tamo6g02495 2495
       
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