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AGRP

Asteraceae Genomic Research Platform

Gene Search

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Example:

Hierarchical alignments with the Arctium lappa genome as reference

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Asteraceae genomes. We used Arctium lappa as a reference, and by comparing homologous gene locus maps and Ks values between Arctium lappa and other Asteraceae, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We constructed a 74×31,441 macro-matrices.


Select Armi_1 Sain_1 Ceso_1 Cati_1 Ccar_1 Cien_1 Cich_1 Lssa_1 Laca_1 Tako_1 Tamo_1 Pslu_1 Lomi_1 Lomi_2 Enbr_1 Ecan_1 Soca_1 Glco_1 Artr_1 Aary_1 Aary_2 Aann_1 Chma_1 Chmo_1 Chmo_2 Chmo_3 Chla_1 Chna_1 Cind_1 Pdy_1 Cobi_1 Hean_1 Bial_1 Bial_2 Dapi_1 Dapi_2 Hetu_1 Hetu_2 Hetu_3 Amtr_1 Smso_1 Smso_2 Taer_1 Fro_1 Fso_1 Ftr_1 Fra_1 Fli_1 Stre_1 Mimi_1 Cobi_2 Hean_2 Bial_3 Bial_4 Dapi_3 Dapi_4 Hetu_4 Hetu_5 Hetu_6 Amtr_2 Smso_3 Smso_4 Taer_2 Fro_2 Fso_2 Ftr_2 Fra_2 Fli_2 Stre_2 Mimi_2
Armi18g00078 . Ceso1g00047 Cati1g00077 Ccar5g01566 Cien7g02486 Cich8g01612 Lssa3g03529 Laca3g02767 . . Pslu2g14188 Lomi6g01979 . Enbr1g09000 Ecan8g02629 Soca4g03352 . Artr9g04555 Aary7g02317 . Aann3g01587 . . . . . . . Pdy3g03046 Cobi3g02246 Hean15g01297 Bial14g01360 Bial5g03077 Dapi30g00607 Dapi14g00585 Hetu43g01380 . Hetu44g01310 Amtr08g03952 . . . . . . . . Stre11g01628 Mimi1g01833 . . . . . . . . . . . . . . . . . . . .
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi18g00077 Sain8g02119 Ceso1g00046 Cati1g00076 Ccar5g01567 Cien7g02488 . Lssa3g03532 Laca3g02768 Tako6g02890 . Pslu2g14155 Lomi6g01978 . . Ecan8g02630 Soca4g03353 Glco7g02022 Artr9g04558 Aary7g02318 Aary15g02220 Aann3g01588 . . . . . . . Pdy3g03047 Cobi8g02643 Hean15g01299 . Bial5g03076 . . Hetu43g01381 . Hetu44g01313 . . . . . . . . . Stre2g01856 . . . . . . . . . . . . . . . . . . . . .
Armi18g00076 Sain8g02106 . Cati1g00075 Ccar5g01569 Cien7g02494 Cich8g01616 Lssa3g03536 . Tako6g02895 Tamo6g02459 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi18g00075 Sain8g02104 Ceso1g00045 Cati1g00074 Ccar5g01570 Cien7g02495 Cich8g01618 Lssa3g03537 . Tako6g02903 Tamo6g02460 Pslu2g14146 . . Enbr1g09003 Ecan8g02634 Soca4g03357 Glco7g02028 Artr9g04566 Aary7g02321 Aary15g02224 Aann3g01591 Chma3g03522 Chmo25g01418 . Chmo27g01236 Chla9g03263 Chna8g00980 Cind9g04255 Pdy3g03053 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi18g00074 Sain8g02102 . Cati1g00073 Ccar5g01571 Cien7g02496 . Lssa3g03538 Laca3g02778 . . . . . Enbr1g09004 Ecan8g02635 Soca4g03358 . . . . . . . . . . . . Pdy3g03057 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi18g00072 Sain8g02097 Ceso1g00043 Cati1g00071 Ccar5g01573 Cien7g02498 Cich8g01620 Lssa3g03542 . Tako6g02908 Tamo6g02472 . . . . Ecan8g02637 Soca4g03360 Glco7g02036 Artr9g04573 Aary7g02322 Aary15g02225 Aann3g01593 . Chmo25g01420 Chmo26g01548 Chmo27g01235 Chla9g03754 Chna8g00982 Cind9g04258 Pdy3g03059 . Hean15g01307 Bial14g01358 . Dapi30g00605 Dapi14g00581 . . . Amtr08g03958 Smso2g00952 Smso23g00565 Taer5g00723 Fro11g01669 Fso10g02362 Ftr12g02533 Fra7g01707 Fli2g01973 Stre11g01630 Mimi1g01835 . . . . . . . . . . . . . . . . . . . .
Armi18g00071 Sain8g02093 . Cati1g00069 Ccar5g01574 Cien7g02500 . Lssa3g03543 Laca3g02781 . Tamo6g02474 Pslu2g14137 Lomi6g01969 Lomi7g01740 Enbr1g09184 Ecan8g02638 Soca4g03361 Glco7g02042 Artr9g04579 Aary7g02324 Aary15g02226 Aann3g01594 . Chmo25g01422 . Chmo27g01233 Chla9g03752 Chna8g00983 Cind9g04259 Pdy3g03060 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi18g00070 Sain8g02092 Ceso1g00042 Cati1g00068 Ccar5g01575 Cien7g02503 Cich8g01622 Lssa3g03548 Laca3g02783 Tako6g02913 Tamo6g02475 Pslu2g14097 Lomi6g01968 Lomi7g01739 . Ecan8g02640 Soca4g03362 Glco7g02043 Artr9g04580 Aary7g02325 Aary15g02227 Aann3g01596 . Chmo25g01423 . Chmo27g01232 Chla9g03751 Chna8g00984 Cind9g04260 Pdy3g03062 Cobi3g02249 Hean15g01310 Bial14g01357 Bial5g03070 Dapi30g00602 Dapi14g00580 Hetu43g01385 Hetu45g01417 Hetu44g01320 Amtr08g03962 Smso2g00950 Smso23g00563 . . . . . . Stre11g01631 . . . . . . . . . . . . . . . . . . . . .
Armi18g00069 Sain8g02089 Ceso1g00041 Cati1g00067 Ccar5g01576 Cien7g02506 Cich8g01624 Lssa3g03549 Laca3g02784 Tako6g02916 Tamo6g02477 Pslu2g14096 . Lomi7g01738 Enbr1g09182 Ecan8g02641 Soca4g03363 Glco7g02046 Artr9g04592 Aary7g02327 Aary15g02230 Aann3g01600 . . . . . . . Pdy3g03063 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
   
Gene_GFF
Select Chromosome Start End Strand Old_gene Gene Num
3 100664959 100669530 + chr3g0635221 Aann3g01587 1587
3 100735975 100736885 - chr3g0635241 Aann3g01588 1588
3 100767635 100773267 + chr3g0635301 Aann3g01591 1591
3 100818979 100824618 - chr3g0635341 Aann3g01593 1593
3 100903629 100907236 + chr3g0635381 Aann3g01594 1594
3 100979871 100989545 + chr3g0635431 Aann3g01596 1596
3 101064557 101069167 + chr3g0635521 Aann3g01600 1600
7 200049977 200055737 + Aargg7g23170.1 Aary7g02317 2317
7 200124876 200125480 - Aargg7g23180.1 Aary7g02318 2318
7 200326557 200330755 + Aargg7g23210.1 Aary7g02321 2321
7 200419826 200424874 - Aargg7g23220.1 Aary7g02322 2322
7 200489201 200492295 + Aargg7g23240.1 Aary7g02324 2324
7 200513235 200519113 + Aargg7g23250.1 Aary7g02325 2325
7 200619683 200621345 + Aargg7g23270.1 Aary7g02327 2327
15 172216987 172217595 - Aargg15g22200.1 Aary15g02220 2220
15 172302464 172306981 + Aargg15g22240.1 Aary15g02224 2224
15 172374714 172378914 - Aargg15g22250.1 Aary15g02225 2225
15 172413653 172416683 + Aargg15g22260.1 Aary15g02226 2226
15 172471732 172477949 + Aargg15g22270.1 Aary15g02227 2227
15 172536031 172537692 + Aargg15g22300.1 Aary15g02230 2230
8 106543231 106561719 + AtrifAMIRv0_Chr08g0555341 Amtr08g03952 3952
8 106663140 106666152 - AtrifAMIRv0_Chr08g0555401 Amtr08g03958 3958
8 106779522 106784439 + AtrifAMIRv0_Chr08g0555441 Amtr08g03962 3962
18 1361612 1364083 - AmiAMIRv0_Chr18g0470021 Armi18g00069 69
18 1371897 1378094 - AmiAMIRv0_Chr18g0470031 Armi18g00070 70
18 1388716 1393880 - AmiAMIRv0_Chr18g0470041 Armi18g00071 71
18 1403584 1405689 + AmiAMIRv0_Chr18g0470051 Armi18g00072 72
18 1436386 1437896 + AmiAMIRv0_Chr18g0470071 Armi18g00074 74
18 1443067 1446790 - AmiAMIRv0_Chr18g0470081 Armi18g00075 75
18 1449277 1451123 - AmiAMIRv0_Chr18g0470091 Armi18g00076 76
18 1460020 1460682 + AmiAMIRv0_Chr18g0470101 Armi18g00077 77
18 1477068 1480176 - AmiAMIRv0_Chr18g0470111 Armi18g00078 78
9 181469292 181473175 + AtridAMIRv0_Chr09g1090981 Artr9g04555 4555
9 181545771 181546384 - AtridAMIRv0_Chr09g1091011 Artr9g04558 4558
9 181811241 181814194 + AtridAMIRv0_Chr09g1091091 Artr9g04566 4566
9 181952926 181953324 - AtridAMIRv0_Chr09g1091161 Artr9g04573 4573
9 182104827 182108252 + AtridAMIRv0_Chr09g1091221 Artr9g04579 4579
9 182173582 182178117 + AtridAMIRv0_Chr09g1091231 Artr9g04580 4580
9 182378890 182380552 + AtridAMIRv0_Chr09g1091351 Artr9g04592 4592
5 76821309 76825954 - g94540.t1 Bial5g03070 3070
5 76877591 76878689 + g94546.t1 Bial5g03076 3076
5 76880733 76885137 - g94547.t1 Bial5g03077 3077
14 25334506 25340164 - g101463.t1 Bial14g01357 1357
14 25386701 25390326 + g101464.t1 Bial14g01358 1358
14 25510369 25512448 - g101466.t1 Bial14g01360 1360
1 445392 448558 - CtAH01T0004800.1 Cati1g00067 67
1 451005 458494 - CtAH01T0004900.1 Cati1g00068 68
1 459926 464737 - CtAH01T0005000.1 Cati1g00069 69
1 473332 477745 + CtAH01T0005100.2 Cati1g00071 71
1 493579 495953 + CtAH01T0005300.1 Cati1g00073 73
1 498733 504677 + CtAH01T0005400.1 Cati1g00074 74
1 504163 506022 - CtAH01T0005500.1 Cati1g00075 75
1 511817 512804 + CtAH01T0005600.1 Cati1g00076 76
1 516518 521856 - CtAH01T0005700.1 Cati1g00077 77
5 36794666 36797891 + gnl|WGS:LEKV|Ccrd_019261.mRNA.1_mrna Ccar5g01566 1566
5 36803237 36804129 - gnl|WGS:LEKV|Ccrd_019262.mRNA.1_mrna Ccar5g01567 1567
5 36815806 36818504 + gnl|WGS:LEKV|Ccrd_019264.mRNA.1_mrna Ccar5g01569 1569
5 36819715 36824025 - gnl|WGS:LEKV|Ccrd_019265.mRNA.1_mrna Ccar5g01570 1570
5 36830334 36832511 - gnl|WGS:LEKV|Ccrd_019266.mRNA.1_mrna Ccar5g01571 1571
5 36850493 36852424 - gnl|WGS:LEKV|Ccrd_019268.mRNA.1_mrna Ccar5g01573 1573
5 36863238 36867439 + gnl|WGS:LEKV|Ccrd_019269.mRNA.1_mrna Ccar5g01574 1574
5 36872529 36880719 + Ccrd_019270 Ccar5g01575 1575
5 36884306 36887411 + gnl|WGS:LEKV|Ccrd_019271.mRNA.1_mrna Ccar5g01576 1576
1 464235 466994 - >KAJ9564320.1 Ceso1g00041 41
1 469753 476020 - >KAJ9564321.1 Ceso1g00042 42
1 491404 503178 + >KAJ9564148.1 Ceso1g00043 43
1 521126 524655 + >KAJ9564144.1 Ceso1g00045 45
1 533414 534077 + >KAJ9564145.1 Ceso1g00046 46
1 537248 540559 - >KAJ9564151.1 Ceso1g00047 47
9 112049632 112050411 - ClaG1_Chr09g0612241 Chla9g03263 3263
9 134984963 134990712 - ClaG1_Chr09g0617121 Chla9g03751 3751
9 135028662 135031788 - ClaG1_Chr09g0617131 Chla9g03752 3752
9 135231068 135235861 + ClaG1_Chr09g0617151 Chla9g03754 3754
3 146389944 146393135 - CmaNakai_Chr03g0264821 Chma3g03522 3522
25 119907520 119913244 + evm.model.scaffold_717.91 Chmo25g01418 1418
25 120027042 120027737 - evm.model.scaffold_717.86 Chmo25g01420 1420
25 120272129 120275095 + evm.model.scaffold_717.78 Chmo25g01422 1422
25 120321845 120327388 + evm.model.scaffold_717.76 Chmo25g01423 1423
26 131532226 131537330 + evm.model.scaffold_634.39 Chmo26g01548 1548
27 100641529 100647191 - evm.model.scaffold_1561.80 Chmo27g01232 1232
27 100677741 100681314 - evm.model.scaffold_1561.78 Chmo27g01233 1233
27 100753460 100758789 + evm.model.scaffold_1561.74 Chmo27g01235 1235
27 100826523 100830785 - evm.model.scaffold_1561.69 Chmo27g01236 1236
8 96314679 96320898 + Cn0525290 Chna8g00980 980
8 96532582 96537744 - Cn0525270 Chna8g00982 982
8 96772521 96775953 + Cn0525210 Chna8g00983 983
8 96819439 96823929 + Cn0525200 Chna8g00984 984
8 53141170 53143727 + KAI3699858.1 Cich8g01612 1612
8 53393260 53394650 + KAI3699862.1 Cich8g01616 1616
8 53419846 53422644 + KAI3699864.1 Cich8g01618 1618
8 53520556 53523587 - KAI3699866.1 Cich8g01620 1620
8 53694657 53699955 + KAI3699868.1 Cich8g01622 1622
8 53751318 53753369 + KAI3699870.1 Cich8g01624 1624
7 37472029 37474499 + KAI3503511.1 Cien7g02486 2486
7 37502250 37502917 - KAI3503513.1 Cien7g02488 2488
7 37604038 37605440 + KAI3503519.1 Cien7g02494 2494
7 37640008 37641597 + KAI3503520.1 Cien7g02495 2495
7 37646178 37647102 - KAI3503521.1 Cien7g02496 2496
7 37672119 37675283 - KAI3503523.1 Cien7g02498 2498
7 37708686 37711181 + KAI3503525.1 Cien7g02500 2500
7 37808423 37813162 + KAI3503528.1 Cien7g02503 2503
7 37827731 37829994 + KAI3503531.1 Cien7g02506 2506
9 147859562 147862443 + D.indicum_Contig82_G00088.t1 Cind9g04255 4255
9 147947204 147951074 - D.indicum_Contig82_G00091.t1 Cind9g04258 4258
9 148098252 148101047 + D.indicum_Contig82_G00092.t1 Cind9g04259 4259
9 148147595 148152103 + D.indicum_Contig82_G00093.t1 Cind9g04260 4260
3 70094188 70100190 - h2tg000002l_1.g22325.t1 Cobi3g02246 2246
3 70195024 70199968 + h2tg000002l_1.g22322.t1 Cobi3g02249 2249
8 75818256 75818895 - h2tg000049l_1.g25228.t1 Cobi8g02643 2643
14 10456916 10462753 - h2tg000265l.g78814.t1 Dapi14g00580 580
14 10469413 10471627 + h2tg000265l.g78813.t1 Dapi14g00581 581
14 10568365 10570599 - h2tg000265l.g78809.t1 Dapi14g00585 585
30 10207815 10213672 - h1tg000008l.g131312.t1 Dapi30g00602 602
30 10240647 10242859 + h1tg000008l.g131315.t1 Dapi30g00605 605
30 10291997 10294057 - h1tg000008l.g131317.t1 Dapi30g00607 607
8 37314889 37320622 + XM_043752423.1 Ecan8g02629 2629
8 37323102 37324393 - XM_043752594.1 Ecan8g02630 2630
8 37344561 37347068 + XM_043750896.1 Ecan8g02634 2634
8 37353441 37354565 - XM_043752334.1 Ecan8g02635 2635
8 37372147 37376349 - XM_043784391.1 Ecan8g02637 2637
8 37380310 37384015 + XM_043751278.1 Ecan8g02638 2638
8 37398967 37404534 + XM_043782833.1 Ecan8g02640 2640
8 37412281 37415469 + XM_043750310.1 Ecan8g02641 2641
1 279079240 279083585 + evm.model.ctg1025.8 Enbr1g09000 9000
1 279114557 279116671 + evm.model.ctg1025.11 Enbr1g09003 9003
1 279119242 279120137 - evm.model.ctg1025.12 Enbr1g09004 9004
1 285200236 285202353 - evm.model.ctg88.3 Enbr1g09182 9182
1 285231257 285237934 - evm.model.ctg88.1 Enbr1g09184 9184
2 35845983 35855230 + FliAMIRv0_Chr02g0053971 Fli2g01973 1973
7 74474183 74477317 - FraAMIRv0_Chr07g0115711 Fra7g01707 1707
11 15094370 15097488 + FroAMIRv0_Chr11g0177131 Fro11g01669 1669
10 65666295 65669417 - FsoAMIRv0_Chr10g0240781 Fso10g02362 2362
12 88727576 88730707 - FtrAMIRv0_Chr12g0356431 Ftr12g02533 2533
7 338483434 338484002 - GcoAMIRv0_Chr07g0468071 Glco7g02022 2022
7 338783275 338787034 + GcoAMIRv0_Chr07g0468131 Glco7g02028 2028
7 339142801 339146369 - GcoAMIRv0_Chr07g0468211 Glco7g02036 2036
7 341513744 341517244 + GcoAMIRv0_Chr07g0468271 Glco7g02042 2042
7 341599596 341603864 + GcoAMIRv0_Chr07g0468281 Glco7g02043 2043
7 341756317 341757925 + GcoAMIRv0_Chr07g0468311 Glco7g02046 2046
15 30871993 30875551 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0685741 Hean15g01297 1297
15 30934847 30935480 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0685771 Hean15g01299 1299
15 31903555 31908618 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0685871 Hean15g01307 1307
15 32007404 32012829 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0685911 Hean15g01310 1310
43 96482602 96485542 + >Htub.h1tg000809l.g469.t1 Hetu43g01380 1380
43 96562220 96562854 - >Htub.h1tg000809l.g470.t1 Hetu43g01381 1381
43 97121911 97126090 + >Htub.h1tg003716l.g252.t1 Hetu43g01385 1385
44 83220658 83224319 + >Htub.h1tg001734l.g488.t1 Hetu44g01310 1310
44 83683646 83684273 - >Htub.h1tg001734l.g485.t1 Hetu44g01313 1313
44 84201834 84206451 + >Htub.h1tg001734l.g477.t1 Hetu44g01320 1320
45 93518932 93525638 + >Htub.h1tg003389l.g187.t1 Hetu45g01417 1417
3 114395047 114398531 + CAI9277126.1 Laca3g02767 2767
3 114613998 114614999 - CAI9277127.1 Laca3g02768 2768
3 115622139 115623975 + CAI9277137.1 Laca3g02778 2778
3 115763123 115767104 + CAI9277141.1 Laca3g02781 2781
3 116120277 116124933 + CAI9277144.1 Laca3g02783 2783
3 116155052 116158083 + CAI9277145.1 Laca3g02784 2784
6 27772890 27778196 - LmiAMIRv0_Chr06g0206061 Lomi6g01968 1968
6 27803330 27806383 - LmiAMIRv0_Chr06g0206071 Lomi6g01969 1969
6 27849055 27849762 + LmiAMIRv0_Chr06g0206161 Lomi6g01978 1978
6 27864570 27866749 - LmiAMIRv0_Chr06g0206171 Lomi6g01979 1979
7 27952519 27954427 - LmiAMIRv0_Chr07g0232081 Lomi7g01738 1738
7 27957009 27962590 - LmiAMIRv0_Chr07g0232091 Lomi7g01739 1739
7 27969628 27972417 - LmiAMIRv0_Chr07g0232101 Lomi7g01740 1740
3 202298173 202298700 + >KAJ0219666.1 Lssa3g03529 3529
3 202979275 202980200 - >KAJ0218766.1 Lssa3g03532 3532
3 203533715 203535699 + >KAJ0214964.1 Lssa3g03536 3536
3 203651856 203654084 + >KAJ0216745.1 Lssa3g03537 3537
3 203659925 203661300 - >KAJ0216210.1 Lssa3g03538 3538
3 204022181 204026479 - >KAJ0219003.1 Lssa3g03542 3542
3 204371514 204374171 + >KAJ0219548.1 Lssa3g03543 3543
3 204966527 204970721 + >KAJ0216788.1 Lssa3g03548 3548
3 205146565 205149636 + >KAJ0219200.1 Lssa3g03549 3549
1 89287941 89292188 + KAD7478697.1 Mimi1g01833 1833
1 89324525 89331936 - KAD7478699.1 Mimi1g01835 1835
3 87965013 87968343 + PdyAMIRv0_Chr03g0128851 Pdy3g03046 3046
3 87972406 87973000 - PdyAMIRv0_Chr03g0128861 Pdy3g03047 3047
3 88082876 88085078 + PdyAMIRv0_Chr03g0128921 Pdy3g03053 3053
3 88098013 88099736 - PdyAMIRv0_Chr03g0128961 Pdy3g03057 3057
3 88152226 88154317 - PdyAMIRv0_Chr03g0128981 Pdy3g03059 3059
3 88165779 88168359 + PdyAMIRv0_Chr03g0128991 Pdy3g03060 3060
3 88176720 88182280 + PdyAMIRv0_Chr03g0129011 Pdy3g03062 3062
3 88188937 88190438 + PdyAMIRv0_Chr03g0129021 Pdy3g03063 3063
2 104830868 104832755 - PluAMIRv0_Chr02g0361411 Pslu2g14096 14096
2 104836322 104841649 - PluAMIRv0_Chr02g0361421 Pslu2g14097 14097
2 105137418 105140545 - PluAMIRv0_Chr02g0361811 Pslu2g14137 14137
2 105254752 105257202 - PluAMIRv0_Chr02g0361901 Pslu2g14146 14146
2 105291075 105291914 + PluAMIRv0_Chr02g0361991 Pslu2g14155 14155
2 105550780 105551472 - PluAMIRv0_Chr02g0362321 Pslu2g14188 14188
8 138135294 138138510 - SinAMIRv0_Chr08g0198221 Sain8g02089 2089
8 138276507 138288941 - SinAMIRv0_Chr08g0198251 Sain8g02092 2092
8 138291620 138297332 - SinAMIRv0_Chr08g0198261 Sain8g02093 2093
8 138561264 138563551 + SinAMIRv0_Chr08g0198301 Sain8g02097 2097
8 139026326 139028198 + SinAMIRv0_Chr08g0198351 Sain8g02102 2102
8 139037637 139043693 - SinAMIRv0_Chr08g0198371 Sain8g02104 2104
8 139209218 139211378 - SinAMIRv0_Chr08g0198391 Sain8g02106 2106
8 139608109 139608740 - SinAMIRv0_Chr08g0198521 Sain8g02119 2119
2 14756383 14761388 - KAI3823983.1 Smso2g00950 950
2 14788431 14791471 + KAI3823985.1 Smso2g00952 952
23 11645407 11648764 - KAI3716963.1 Smso23g00563 563
23 11668489 11674332 + KAI3716965.1 Smso23g00565 565
4 63825379 63830714 + transfrag37645.t01 Soca4g03352 3352
4 63834067 63835740 - augustus55950.t01 Soca4g03353 3353
4 63867503 63870402 + augustus55946.t01 Soca4g03357 3357
4 63874518 63875984 - transfrag37639.t01 Soca4g03358 3358
4 63924791 63929214 - transfrag37637.t01 Soca4g03360 3360
4 63935191 63938289 + transfrag37636.t01 Soca4g03361 3361
4 63954555 63962738 + augustus55941.t01 Soca4g03362 3362
4 63980812 63983951 + transfrag37634.t01 Soca4g03363 3363
2 60328226 60328924 + Streb.2G018560.1 Stre2g01856 1856
11 90109386 90125354 + Streb.11G016280.1 Stre11g01628 1628
11 90213676 90218007 - Streb.11G016300.1 Stre11g01630 1630
11 90222971 90228834 + Streb.11G016310.1 Stre11g01631 1631
5 6196687 6200422 + >KAK1423252.1 Taer5g00723 723
6 52005533 52006479 + TkA06G199960.1 Tako6g02890 2890
6 52184027 52194407 - TkA06G200660.2 Tako6g02895 2895
6 52461136 52465952 + TkA06G201970.1 Tako6g02903 2903
6 52578938 52582207 - TkA06G202420.1 Tako6g02908 2908
6 52725741 52729562 + TkA06G202970.1 Tako6g02913 2913
6 52826587 52829528 + TkA06G203480.1 Tako6g02916 2916
6 39042534 39045866 + TbA06G062200.1 Tamo6g02459 2459
6 39049122 39053206 + TbA06G062190.1 Tamo6g02460 2460
6 39313190 39316588 - TbA06G061850.1 Tamo6g02472 2472
6 39370876 39373579 + TbA06G061790.1 Tamo6g02474 2474
6 39379440 39383252 + TbA06G061780.1 Tamo6g02475 2475
6 39401580 39404605 + TbA06G061730.1 Tamo6g02477 2477
       
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