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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Hierarchical alignments with the Arctium lappa genome as reference

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Asteraceae genomes. We used Arctium lappa as a reference, and by comparing homologous gene locus maps and Ks values between Arctium lappa and other Asteraceae, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We constructed a 74×31,441 macro-matrices.


Select Armi_1 Sain_1 Ceso_1 Cati_1 Ccar_1 Cien_1 Cich_1 Lssa_1 Laca_1 Tako_1 Tamo_1 Pslu_1 Lomi_1 Lomi_2 Enbr_1 Ecan_1 Soca_1 Glco_1 Artr_1 Aary_1 Aary_2 Aann_1 Chma_1 Chmo_1 Chmo_2 Chmo_3 Chla_1 Chna_1 Cind_1 Pdy_1 Cobi_1 Hean_1 Bial_1 Bial_2 Dapi_1 Dapi_2 Hetu_1 Hetu_2 Hetu_3 Amtr_1 Smso_1 Smso_2 Taer_1 Fro_1 Fso_1 Ftr_1 Fra_1 Fli_1 Stre_1 Mimi_1 Cobi_2 Hean_2 Bial_3 Bial_4 Dapi_3 Dapi_4 Hetu_4 Hetu_5 Hetu_6 Amtr_2 Smso_3 Smso_4 Taer_2 Fro_2 Fso_2 Ftr_2 Fra_2 Fli_2 Stre_2 Mimi_2
Armi1g00844 Sain12g00669 . Cati3g00856 . . . . . . . Pslu1g21702 . Lomi2g04508 . . . . . . . . Chma7g08688 . . . Chla6g06376 Chna2g00297 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00845 Sain12g00670 Ceso2g01589 Cati3g00861 . Cien5g03089 Cich4g04201 Lssa7g03148 . Tako4g04432 Tamo4g03183 Pslu1g21703 Lomi1g00153 Lomi2g04509 Enbr6g01296 Ecan3g01939 Soca5g02941 . Artr3g12343 Aary5g02961 Aary13g03498 Aann4g01433 . . . . Chla6g06374 Chna2g00295 Cind3g00361 Pdy4g00269 . Hean4g04477 . . . . Hetu11g00115 Hetu12g00110 Hetu10g00132 Amtr06g04262 . Smso26g02011 . . . . . . . . Cobi4g03332 Hean16g00815 Bial12g02490 Bial24g02339 Dapi7g00097 Dapi23g00120 Hetu48g00904 Hetu46g01024 . Amtr01g04316 . Smso29g00264 Taer1g05708 Fro12g02555 Fso2g00079 Ftr4g03833 Fra11g02763 Fli1g00116 Stre6g00154 Mimi17g00145
Armi1g00846 Sain12g00673 Ceso2g01590 Cati3g00867 . . Cich4g04198 Lssa7g03147 . Tako4g04434 Tamo4g03184 Pslu1g21706 Lomi1g00152 . . . . Glco3g00211 . Aary5g02964 Aary13g03504 Aann4g01441 . . . . Chla6g06373 Chna2g00292 Cind3g00359 Pdy4g00266 . . . . . . . . . . . . . . . . . . . . Cobi4g03331 Hean16g00816 Bial4g03643 Bial16g02990 Dapi7g00098 Dapi23g00121 Hetu48g00903 Hetu46g01022 Hetu47g00999 Amtr01g04312 Smso7g00227 Smso29g00263 . . . . . . Stre6g00155 .
Armi1g00847 Sain12g00674 Ceso2g01591 Cati3g00869 . . Cich4g04197 Lssa7g03146 . Tako4g04435 . . . . Enbr6g01293 Ecan3g01937 Soca5g02945 . Artr3g12349 . . Aann4g01444 . . . . . Chna2g00290 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
. Sain12g00677 . . Ccar2g01870 . . . . . . Pslu1g21715 . Lomi2g04510 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00848 . Ceso2g01596 Cati3g00870 . . Cich4g04196 Lssa7g03145 . . Tamo4g03185 . Lomi1g00151 . Enbr6g01290 Ecan3g01935 Soca5g02948 Glco3g00213 Artr3g12351 Aary5g02966 Aary13g03507 Aann4g01445 . . . . Chla6g06370 Chna2g00289 Cind3g00356 Pdy4g00264 . Hean4g04480 . . . . Hetu11g00111 . . Amtr06g04266 . . . . . . . . . . Cobi4g03330 Hean16g00817 Bial4g03642 Bial16g02989 Dapi7g00099 Dapi23g00122 Hetu48g00901 Hetu46g01021 Hetu47g00998 Amtr01g04311 Smso7g00225 Smso29g00262 Taer1g05706 Fro12g02552 . Ftr4g03832 Fra11g02764 Fli1g00117 Stre6g00156 Mimi17g00146
Armi1g00849 Sain12g00678 Ceso2g01600 Cati3g00879 Ccar2g01868 . Cich4g04193 Lssa7g03143 Laca7g02556 . Tamo4g03186 Pslu1g21716 Lomi1g00150 . Enbr6g01285 Ecan3g01934 Soca5g02950 Glco3g00220 . Aary5g02967 Aary13g03508 Aann4g01446 . . . . Chla6g06367 Chna2g00285 Cind3g05720 Pdy4g00263 . Hean4g04481 . . Dapi16g02023 . . . . Amtr06g04277 . Smso26g02013 . . . . . . . Mimi9g01539 Cobi4g03329 Hean16g00818 Bial4g03641 Bial16g02988 Dapi7g00100 Dapi23g00123 . . . Amtr01g04310 Smso7g00224 . Taer1g05705 Fro12g02551 . Ftr4g03831 Fra11g02765 Fli1g00118 Stre6g00157 Mimi17g00148
Armi1g00850 Sain12g00679 . Cati3g00882 Ccar2g01866 Cien5g03086 Cich4g04192 Lssa7g03142 Laca7g02555 . . Pslu1g21717 Lomi1g00149 Lomi2g04511 Enbr6g01281 Ecan3g01932 Soca5g02953 Glco3g00223 Artr3g12362 Aary5g02970 Aary13g03511 Aann4g01450 Chma7g08711 . . Chmo15g00314 Chla6g06364 Chna2g00282 Cind3g05714 Pdy4g00261 . Hean4g04482 . . . . Hetu11g00109 Hetu12g00105 Hetu10g00126 Amtr06g04278 . Smso26g02014 . . . . . . . Mimi9g01540 . . . . . . . . . . . . . . . . . . . .
Armi1g00851 Sain12g00680 Ceso2g01601 Cati3g00885 Ccar2g01865 . . Lssa7g03141 Laca7g02554 . . Pslu1g21720 Lomi1g00148 . Enbr6g01279 Ecan3g01931 Soca5g02954 Glco3g00224 Artr3g12365 . . Aann4g01451 . . . . . . . Pdy4g00259 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00852 Sain12g00681 Ceso2g01602 Cati3g00887 Ccar2g01864 . Cich4g04191 Lssa7g03140 Laca7g02553 . Tamo4g03187 Pslu1g21721 Lomi1g00147 Lomi2g04512 Enbr6g01278 Ecan3g01930 Soca5g02955 Glco3g00225 . . . Aann4g01454 Chma7g08718 . . . Chla6g06359 Chna2g00280 Cind3g05710 Pdy4g00256 . Hean4g04483 . . . . . . . . . Smso26g02016 . . . . . . . . Cobi4g03328 Hean16g00819 Bial4g03640 Bial16g02986 Dapi7g00102 Dapi23g00125 . . . Amtr01g04309 Smso7g00222 Smso29g00260 . . . . Fra11g02766 Fli1g00120 Stre6g00158 Mimi17g00149
   
Gene_GFF
Select Chromosome Start End Strand Old_gene Gene Num
4 71857638 71859686 + chr4g0785961 Aann4g01433 1433
4 71959019 71964887 + chr4g0786111 Aann4g01441 1441
4 71975035 71977196 - chr4g0786141 Aann4g01444 1444
4 71983705 71986952 - chr4g0786161 Aann4g01445 1445
4 71991551 71997815 + chr4g0786181 Aann4g01446 1446
4 72053103 72060502 + chr4g0786231 Aann4g01450 1450
4 72061407 72063502 + chr4g0786241 Aann4g01451 1451
4 72089922 72090696 - chr4g0786281 Aann4g01454 1454
5 180786899 180788581 + Aargg5g29610.1 Aary5g02961 2961
5 180983879 180993824 + Aargg5g29640.1 Aary5g02964 2964
5 181042108 181044376 - Aargg5g29660.1 Aary5g02966 2966
5 181072434 181077630 + Aargg5g29670.1 Aary5g02967 2967
5 181108250 181115057 + Aargg5g29700.1 Aary5g02970 2970
13 210436468 210438159 + Aargg13g34980.1 Aary13g03498 3498
13 210821794 210831219 + Aargg13g35040.1 Aary13g03504 3504
13 210858058 210860003 - Aargg13g35070.1 Aary13g03507 3507
13 210931286 210935876 + Aargg13g35080.1 Aary13g03508 3508
13 210980481 210987020 + Aargg13g35110.1 Aary13g03511 3511
1 116336335 116344084 + AtrifAMIRv0_Chr01g0043091 Amtr01g04309 4309
1 116344462 116348800 - AtrifAMIRv0_Chr01g0043101 Amtr01g04310 4310
1 116410734 116414092 + AtrifAMIRv0_Chr01g0043111 Amtr01g04311 4311
1 116416101 116427991 - AtrifAMIRv0_Chr01g0043121 Amtr01g04312 4312
1 116451651 116452521 - AtrifAMIRv0_Chr01g0043161 Amtr01g04316 4316
6 93947097 93948317 + AtrifAMIRv0_Chr06g0430871 Amtr06g04262 4262
6 93983968 93984306 + AtrifAMIRv0_Chr06g0430911 Amtr06g04266 4266
6 94443988 94448105 + AtrifAMIRv0_Chr06g0431021 Amtr06g04277 4277
6 94491649 94501839 + AtrifAMIRv0_Chr06g0431031 Amtr06g04278 4278
1 22180790 22181371 + AmiAMIRv0_Chr01g0008441 Armi1g00844 844
1 22288963 22289847 + AmiAMIRv0_Chr01g0008451 Armi1g00845 845
1 22374109 22394056 + AmiAMIRv0_Chr01g0008461 Armi1g00846 846
1 22412330 22415658 - AmiAMIRv0_Chr01g0008471 Armi1g00847 847
1 22473106 22474595 - AmiAMIRv0_Chr01g0008481 Armi1g00848 848
1 22527930 22534051 - AmiAMIRv0_Chr01g0008491 Armi1g00849 849
1 22578389 22584193 + AmiAMIRv0_Chr01g0008501 Armi1g00850 850
1 22598209 22604501 - AmiAMIRv0_Chr01g0008511 Armi1g00851 851
1 22607297 22617627 - AmiAMIRv0_Chr01g0008521 Armi1g00852 852
3 424162245 424163231 + AtridAMIRv0_Chr03g0430791 Artr3g12343 12343
3 424259847 424261654 - AtridAMIRv0_Chr03g0430851 Artr3g12349 12349
3 424272027 424273809 - AtridAMIRv0_Chr03g0430871 Artr3g12351 12351
3 424786688 424792239 + AtridAMIRv0_Chr03g0430981 Artr3g12362 12362
3 424852382 424854559 + AtridAMIRv0_Chr03g0431011 Artr3g12365 12365
4 81996649 82006699 + g62282.t1 Bial4g03640 3640
4 82007242 82011935 - g62281.t1 Bial4g03641 3641
4 82014215 82020026 - g62280.t1 Bial4g03642 3642
4 82025459 82034896 - g62279.t1 Bial4g03643 3643
12 55186455 55187159 + g35689.t1 Bial12g02490 2490
16 74979831 74990854 + g59541.t1 Bial16g02986 2986
16 74993776 74996216 - g59539.t1 Bial16g02988 2988
16 74998382 75004107 - g59538.t1 Bial16g02989 2989
16 75012963 75026005 - g59537.t1 Bial16g02990 2990
24 54104720 54105405 + g68005.t1 Bial24g02339 2339
3 10277091 10287611 + CtAH03T0060800.1 Cati3g00856 856
3 10326131 10327291 + CtAH03T0061100.1 Cati3g00861 861
3 10491243 10504884 + CtAH03T0061700.1 Cati3g00867 867
3 10504393 10508185 - CtAH03T0061800.1 Cati3g00869 869
3 10560725 10562977 - CtAH03T0061900.1 Cati3g00870 870
3 10675902 10680160 + CtAH03T0062700.1 Cati3g00879 879
3 10686193 10697414 + CtAH03T0062900.2 Cati3g00882 882
3 10711571 10715815 - CtAH03T0063100.1 Cati3g00885 885
3 10718453 10726224 - CtAH03T0063200.1 Cati3g00887 887
2 65054246 65062609 + gnl|WGS:LEKV|Ccrd_010910.mRNA.1_mrna Ccar2g01864 1864
2 65063843 65066310 + gnl|WGS:LEKV|Ccrd_010911.mRNA.1_mrna Ccar2g01865 1865
2 65069013 65074352 + gnl|WGS:LEKV|Ccrd_010912.mRNA.1_mrna Ccar2g01866 1866
2 65083476 65087992 - gnl|WGS:LEKV|Ccrd_010914.mRNA.1_mrna Ccar2g01868 1868
2 65105914 65111058 - gnl|WGS:LEKV|Ccrd_010916.mRNA.1_mrna Ccar2g01870 1870
2 33749263 33750263 + >KAJ9561037.1 Ceso2g01589 1589
2 33762413 33771706 + >KAJ9561040.1 Ceso2g01590 1590
2 33772660 33773189 - >KAJ9561043.1 Ceso2g01591 1591
2 33933991 33935991 - >KAJ9560927.1 Ceso2g01596 1596
2 33986833 33991830 + >KAJ9561127.1 Ceso2g01600 1600
2 34003882 34007595 - >KAJ9561131.1 Ceso2g01601 1601
2 34032606 34033433 - >KAJ9561134.1 Ceso2g01602 1602
6 260285208 260290242 + ClaG1_Chr06g0436061 Chla6g06359 6359
6 260442551 260448880 - ClaG1_Chr06g0436111 Chla6g06364 6364
6 260460155 260502872 - ClaG1_Chr06g0436141 Chla6g06367 6367
6 260542479 260544376 + ClaG1_Chr06g0436171 Chla6g06370 6370
6 260563066 260570763 - ClaG1_Chr06g0436201 Chla6g06373 6373
6 260664970 260666105 - ClaG1_Chr06g0436211 Chla6g06374 6374
6 260681080 260681685 + ClaG1_Chr06g0436231 Chla6g06376 6376
7 294855871 294856395 - CmaNakai_Chr07g0709901 Chma7g08688 8688
7 295126467 295133370 + CmaNakai_Chr07g0710131 Chma7g08711 8711
7 295458248 295463271 - CmaNakai_Chr07g0710201 Chma7g08718 8718
15 16375947 16382686 - evm.model.scaffold_4533.18 Chmo15g00314 314
2 16229558 16235298 + Cn1266160 Chna2g00280 280
2 16404838 16413815 - Cn1266090 Chna2g00282 282
2 16495302 16497836 + Cn1266060 Chna2g00285 285
2 16632823 16635363 + Cn1266000 Chna2g00289 289
2 16704142 16705882 + Cn1265990 Chna2g00290 290
2 16721833 16730386 - Cn1265970 Chna2g00292 292
2 16782731 16783871 - Cn1265940 Chna2g00295 295
2 16818741 16819283 + Cn1265900 Chna2g00297 297
4 122629596 122634337 + KAI3753326.1 Cich4g04191 4191
4 122635588 122638487 - KAI3753327.1 Cich4g04192 4192
4 122640131 122642260 - KAI3753328.1 Cich4g04193 4193
4 122671829 122673277 + KAI3753331.1 Cich4g04196 4196
4 122678722 122680501 + KAI3753332.1 Cich4g04197 4197
4 122680705 122686843 - KAI3753333.1 Cich4g04198 4198
4 122739745 122740485 - KAI3753336.1 Cich4g04201 4201
5 73751590 73755100 - KAI3509606.1 Cien5g03086 3086
5 73817716 73818469 - KAI3509609.1 Cien5g03089 3089
3 354818794 354821169 + D.indicum_Contig1240_G00008.t1 Cind3g00356 356
3 354863624 354871913 - D.indicum_Contig1240_G00011.t1 Cind3g00359 359
3 354901853 354902577 - D.indicum_Contig1240_G00013.t1 Cind3g00361 361
3 356338722 356343713 - D.indicum_Contig849_G00009.t1 Cind3g05710 5710
3 356176718 356183338 + D.indicum_Contig849_G00013.t1 Cind3g05714 5714
3 356056936 356061131 + D.indicum_Contig849_G00019.t1 Cind3g05720 5720
4 83516561 83527952 + h2tg000064l_1.g27543.t1 Cobi4g03328 3328
4 83528536 83533485 - h2tg000064l_1.g27544.t1 Cobi4g03329 3329
4 83535715 83539777 - h2tg000064l_1.g27545.t1 Cobi4g03330 3330
4 83548883 83557107 - h2tg000064l_1.g27546.t1 Cobi4g03331 3331
4 83559894 83561943 - h2tg000064l_1.g27547.t1 Cobi4g03332 3332
7 1808070 1810619 + h1tg000136l.g124567.t1 Dapi7g00097 97
7 1810698 1822352 + h1tg000136l.g124566.t1 Dapi7g00098 98
7 1824626 1827136 - h1tg000136l.g124565.t1 Dapi7g00099 99
7 1838857 1844176 + h1tg000136l.g124564.t1 Dapi7g00100 100
7 1868045 1878223 - h1tg000136l.g124562.t1 Dapi7g00102 102
16 79496735 79501711 + h1tg000026l.g56976.t1 Dapi16g02023 2023
23 2519806 2520681 + h2tg000064l.g12458.t1 Dapi23g00120 120
23 2522750 2530919 + h2tg000064l.g12459.t1 Dapi23g00121 121
23 2533170 2536078 - h2tg000064l.g12460.t1 Dapi23g00122 122
23 2542714 2548027 + h2tg000064l.g12461.t1 Dapi23g00123 123
23 2559490 2566549 - h2tg000064l.g12463.t1 Dapi23g00125 125
3 30312503 30318251 + XM_043762677.1 Ecan3g01930 1930
3 30323823 30325747 + XM_043764111.1 Ecan3g01931 1931
3 30329693 30336707 - XM_043762678.1 Ecan3g01932 1932
3 30374156 30376349 - XM_043765657.1 Ecan3g01934 1934
3 30379736 30382423 + XM_043765891.1 Ecan3g01935 1935
3 30388584 30391118 + XM_043765828.1 Ecan3g01937 1937
3 30396754 30398130 - XM_043765457.1 Ecan3g01939 1939
6 45175994 45183078 + evm.model.ctg2512.5 Enbr6g01278 1278
6 45190708 45192521 + evm.model.ctg2512.6 Enbr6g01279 1279
6 45203226 45210271 - evm.model.ctg2512.8 Enbr6g01281 1281
6 45233183 45236241 - evm.model.ctg2512.13 Enbr6g01285 1285
6 45291562 45294143 + evm.model.ctg2512.20 Enbr6g01290 1290
6 45324156 45326483 + evm.model.ctg2512.24 Enbr6g01293 1293
6 45364689 45365827 - evm.model.ctg2512.28 Enbr6g01296 1296
1 2087281 2088021 + FliAMIRv0_Chr01g0001141 Fli1g00116 116
1 2147818 2149915 - FliAMIRv0_Chr01g0001151 Fli1g00117 117
1 2165226 2169525 + FliAMIRv0_Chr01g0001161 Fli1g00118 118
1 2174280 2182476 - FliAMIRv0_Chr01g0001181 Fli1g00120 120
11 81110662 81111407 + FraAMIRv0_Chr11g0227851 Fra11g02763 2763
11 81130502 81132599 - FraAMIRv0_Chr11g0227861 Fra11g02764 2764
11 81134653 81138336 + FraAMIRv0_Chr11g0227871 Fra11g02765 2765
11 81139070 81146466 - FraAMIRv0_Chr11g0227881 Fra11g02766 2766
12 33331573 33336742 - FroAMIRv0_Chr12g0220991 Fro12g02551 2551
12 33339071 33341161 + FroAMIRv0_Chr12g0221001 Fro12g02552 2552
12 33371291 33372035 - FroAMIRv0_Chr12g0221031 Fro12g02555 2555
2 964364 965131 + FsoAMIRv0_Chr02g0028981 Fso2g00079 79
4 122297626 122301069 - FtrAMIRv0_Chr04g0132651 Ftr4g03831 3831
4 122303062 122305079 + FtrAMIRv0_Chr04g0132661 Ftr4g03832 3832
4 122322713 122323447 - FtrAMIRv0_Chr04g0132671 Ftr4g03833 3833
3 12037194 12044345 + GcoAMIRv0_Chr03g0158401 Glco3g00211 211
3 12050377 12052336 - GcoAMIRv0_Chr03g0158421 Glco3g00213 213
3 12465902 12469456 + GcoAMIRv0_Chr03g0158491 Glco3g00220 220
3 12531955 12538611 + GcoAMIRv0_Chr03g0158521 Glco3g00223 223
3 12539625 12541274 + GcoAMIRv0_Chr03g0158531 Glco3g00224 224
3 12541729 12546929 - GcoAMIRv0_Chr03g0158541 Glco3g00225 225
4 206163170 206164689 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr04g0191191 Hean4g04477 4477
4 206185682 206186323 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr04g0191221 Hean4g04480 4480
4 206188557 206192598 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr04g0191231 Hean4g04481 4481
4 206206918 206213978 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr04g0191241 Hean4g04482 4482
4 206218595 206229923 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr04g0191251 Hean4g04483 4483
16 23301654 23303644 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0731981 Hean16g00815 815
16 23317491 23333398 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0731991 Hean16g00816 816
16 23357647 23361350 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0732001 Hean16g00817 817
16 23390449 23397133 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0732011 Hean16g00818 818
16 23395812 23405986 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0732021 Hean16g00819 819
10 4764927 4768309 - >Htub.h1tg000798l.g567.t1 Hetu10g00126 126
10 4889236 4890296 - >Htub.h1tg000798l.g561.t1 Hetu10g00132 132
11 4151116 4157683 - >Htub.h1tg000030l.g163.t1 Hetu11g00109 109
11 4191335 4191976 + >Htub.h1tg000030l.g165.t1 Hetu11g00111 111
11 4247275 4250214 - >Htub.h1tg000030l.g169.t1 Hetu11g00115 115
12 4224192 4230738 - >Htub.h1tg000754l.g309.t1 Hetu12g00105 105
12 4303531 4304541 - >Htub.h1tg000754l.g314.t1 Hetu12g00110 110
46 51508150 51511196 + >Htub.h1tg000086l.g386.t1 Hetu46g01021 1021
46 51596773 51618451 - >Htub.h1tg000086l.g385.t1 Hetu46g01022 1022
46 51649835 51651076 - >Htub.h1tg000086l.g383.t1 Hetu46g01024 1024
47 56191513 56194530 + >Htub.h1tg003063l.g4.t1 Hetu47g00998 998
47 56308292 56325911 - >Htub.h1tg003063l.g5.t1 Hetu47g00999 999
48 47821460 47824546 + >Htub.h1tg001458l.g42.t1 Hetu48g00901 901
48 47905271 47923395 - >Htub.h1tg001458l.g44.t1 Hetu48g00903 903
48 48119075 48120213 - >Htub.h1tg001458l.g45.t1 Hetu48g00904 904
7 122240780 122245795 + CAI9294733.1 Laca7g02553 2553
7 122253766 122255403 + CAI9294734.1 Laca7g02554 2554
7 122256431 122260640 - CAI9294735.1 Laca7g02555 2555
7 122262511 122265264 - CAI9294736.1 Laca7g02556 2556
1 1292877 1298088 + LmiAMIRv0_Chr01g0001471 Lomi1g00147 147
1 1299659 1301693 - LmiAMIRv0_Chr01g0001481 Lomi1g00148 148
1 1307559 1312856 - LmiAMIRv0_Chr01g0001491 Lomi1g00149 149
1 1318601 1323658 - LmiAMIRv0_Chr01g0001501 Lomi1g00150 150
1 1328269 1329619 + LmiAMIRv0_Chr01g0001511 Lomi1g00151 151
1 1331305 1340453 - LmiAMIRv0_Chr01g0001521 Lomi1g00152 152
1 1349208 1350265 - LmiAMIRv0_Chr01g0001531 Lomi1g00153 153
2 50168049 50168630 + LmiAMIRv0_Chr02g0090411 Lomi2g04508 4508
2 50172343 50173400 + LmiAMIRv0_Chr02g0090421 Lomi2g04509 4509
2 50184190 50186733 + LmiAMIRv0_Chr02g0090431 Lomi2g04510 4510
2 50187819 50193989 + LmiAMIRv0_Chr02g0090441 Lomi2g04511 4511
2 50203441 50208444 - LmiAMIRv0_Chr02g0090451 Lomi2g04512 4512
7 166322823 166327994 + >KAJ0196173.1 Lssa7g03140 3140
7 166334538 166335863 + >KAJ0196766.1 Lssa7g03141 3141
7 166337790 166341663 - >KAJ0195271.1 Lssa7g03142 3142
7 166344377 166346727 - >KAJ0195734.1 Lssa7g03143 3143
7 166374832 166376692 + >KAJ0197109.1 Lssa7g03145 3145
7 166380353 166381941 + >KAJ0198573.1 Lssa7g03146 3146
7 166381850 166387651 - >KAJ0196062.1 Lssa7g03147 3147
7 166410467 166411407 - >KAJ0197539.1 Lssa7g03148 3148
9 56138704 56144158 + KAD5318274.1 Mimi9g01539 1539
9 56175716 56181686 + KAD5318275.1 Mimi9g01540 1540
17 4076909 4077890 + KAD3066467.1 Mimi17g00145 145
17 4082392 4083027 - KAD3066468.1 Mimi17g00146 146
17 4109272 4115269 + KAD3066470.1 Mimi17g00148 148
17 4155794 4166820 - KAD3066471.1 Mimi17g00149 149
4 5267091 5272261 + PdyAMIRv0_Chr04g0150641 Pdy4g00256 256
4 5351829 5352696 + PdyAMIRv0_Chr04g0150671 Pdy4g00259 259
4 5447552 5452765 - PdyAMIRv0_Chr04g0150691 Pdy4g00261 261
4 5460094 5465760 - PdyAMIRv0_Chr04g0150711 Pdy4g00263 263
4 5475658 5477051 + PdyAMIRv0_Chr04g0150721 Pdy4g00264 264
4 5528052 5543670 - PdyAMIRv0_Chr04g0150741 Pdy4g00266 266
4 5588462 5589519 - PdyAMIRv0_Chr04g0150771 Pdy4g00269 269
1 155924854 155925438 + PluAMIRv0_Chr01g0216071 Pslu1g21702 21702
1 155928071 155929035 + PluAMIRv0_Chr01g0216081 Pslu1g21703 21703
1 155936398 155945779 + PluAMIRv0_Chr01g0216111 Pslu1g21706 21706
1 155979743 155982356 + PluAMIRv0_Chr01g0216201 Pslu1g21715 21715
1 155984418 155986883 + PluAMIRv0_Chr01g0216211 Pslu1g21716 21716
1 155987825 155993296 + PluAMIRv0_Chr01g0216221 Pslu1g21717 21717
1 156001244 156004937 + PluAMIRv0_Chr01g0216251 Pslu1g21720 21720
1 156006402 156011327 - PluAMIRv0_Chr01g0216261 Pslu1g21721 21721
12 15608258 15608749 + SinAMIRv0_Chr12g0362331 Sain12g00669 669
12 15642714 15643912 + SinAMIRv0_Chr12g0362341 Sain12g00670 670
12 15707173 15717409 + SinAMIRv0_Chr12g0362371 Sain12g00673 673
12 15718079 15721724 - SinAMIRv0_Chr12g0362381 Sain12g00674 674
12 15836775 15842047 + SinAMIRv0_Chr12g0362411 Sain12g00677 677
12 15843915 15848209 + SinAMIRv0_Chr12g0362421 Sain12g00678 678
12 15850283 15854548 + SinAMIRv0_Chr12g0362431 Sain12g00679 679
12 15858207 15861378 - SinAMIRv0_Chr12g0362441 Sain12g00680 680
12 15891269 15902634 - SinAMIRv0_Chr12g0362451 Sain12g00681 681
7 3872309 3879581 + KAI3809802.1 Smso7g00222 222
7 3899312 3909767 - KAI3809804.1 Smso7g00224 224
7 3917578 3920344 + KAI3809805.1 Smso7g00225 225
7 3927975 3938866 - KAI3809807.1 Smso7g00227 227
26 45049941 45050604 + KAI3695496.1 Smso26g02011 2011
26 45063342 45069811 + KAI3695498.1 Smso26g02013 2013
26 45081358 45091349 + KAI3695499.1 Smso26g02014 2014
26 45102832 45109952 - KAI3695501.1 Smso26g02016 2016
29 4165682 4172750 + KAI3675254.1 Smso29g00260 260
29 4199494 4201476 + KAI3675256.1 Smso29g00262 262
29 4211921 4232917 - KAI3675257.1 Smso29g00263 263
29 4248736 4249453 - KAI3675258.1 Smso29g00264 264
5 32897803 32899210 + transfrag31887.t01 Soca5g02941 2941
5 32923036 32925398 - augustus47675.t01 Soca5g02945 2945
5 32942884 32944863 - transfrag31883.t01 Soca5g02948 2948
5 32953125 32958713 + augustus47672.t02 Soca5g02950 2950
5 32967523 32976447 + transfrag31880.t01 Soca5g02953 2953
5 33008484 33010670 - augustus47667.t01 Soca5g02954 2954
5 33019809 33025469 - transfrag31879.t01 Soca5g02955 2955
6 3921906 3923357 + Streb.6G001540.1 Stre6g00154 154
6 3926878 3937452 + Streb.6G001550.1 Stre6g00155 155
6 3940128 3942497 - Streb.6G001560.1 Stre6g00156 156
6 3953672 3959273 + Streb.6G001570.1 Stre6g00157 157
6 3965639 3977387 - Streb.6G001580.1 Stre6g00158 158
1 51814860 51819274 - >KAK1439881.1 Taer1g05705 5705
1 51821523 51823613 + >KAK1439882.1 Taer1g05706 5706
1 51842803 51843464 - >KAK1439884.1 Taer1g05708 5708
4 102248970 102249982 + TkA04G406660.1 Tako4g04432 4432
4 102254061 102259639 + TkA04G406680.1 Tako4g04434 4434
4 102259620 102260561 - TkA04G406690.1 Tako4g04435 4435
4 61559856 61560926 + TbA04G020200.1 Tamo4g03183 3183
4 61564709 61573423 + TbA04G020190.1 Tamo4g03184 3184
4 61576356 61578130 - TbA04G020180.1 Tamo4g03185 3185
4 61596051 61599524 + TbA04G020160.1 Tamo4g03186 3186
4 61606985 61613358 - TbA04G020140.1 Tamo4g03187 3187
       
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