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Asteraceae Genomic Research Platform

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Example:

Hierarchical alignments with the Arctium lappa genome as reference

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Asteraceae genomes. We used Arctium lappa as a reference, and by comparing homologous gene locus maps and Ks values between Arctium lappa and other Asteraceae, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We constructed a 74×31,441 macro-matrices.


Select Armi_1 Sain_1 Ceso_1 Cati_1 Ccar_1 Cien_1 Cich_1 Lssa_1 Laca_1 Tako_1 Tamo_1 Pslu_1 Lomi_1 Lomi_2 Enbr_1 Ecan_1 Soca_1 Glco_1 Artr_1 Aary_1 Aary_2 Aann_1 Chma_1 Chmo_1 Chmo_2 Chmo_3 Chla_1 Chna_1 Cind_1 Pdy_1 Cobi_1 Hean_1 Bial_1 Bial_2 Dapi_1 Dapi_2 Hetu_1 Hetu_2 Hetu_3 Amtr_1 Smso_1 Smso_2 Taer_1 Fro_1 Fso_1 Ftr_1 Fra_1 Fli_1 Stre_1 Mimi_1 Cobi_2 Hean_2 Bial_3 Bial_4 Dapi_3 Dapi_4 Hetu_4 Hetu_5 Hetu_6 Amtr_2 Smso_3 Smso_4 Taer_2 Fro_2 Fso_2 Ftr_2 Fra_2 Fli_2 Stre_2 Mimi_2
Armi1g00465 Sain12g00423 . Cati3g00515 Ccar2g02006 Cien5g03206 Cich4g04499 Lssa7g03461 Laca7g02808 Tako4g03951 Tamo4g02862 Pslu1g21261 Lomi1g00302 Lomi2g04356 . Ecan3g02161 Soca5g02496 Glco3g01141 Artr3g11578 Aary5g02792 . Aann4g01122 . Chmo13g00778 . Chmo15g00664 Chla6g05946 Chna2g00640 Cind3g01649 Pdy4g00515 Cobi6g01367 Hean15g03935 . Bial12g02361 . . Hetu17g02507 Hetu16g02617 Hetu18g02778 Amtr02g04087 . Smso13g00214 . . . . . . Stre9g01592 Mimi9g01448 . . . . . . . . . . . . . . . . . . . .
Armi1g00466 Sain12g00424 . Cati3g00516 Ccar2g02005 Cien5g03205 Cich4g04498 Lssa7g03460 Laca7g02807 Tako4g03952 Tamo4g02863 Pslu1g21262 Lomi1g00301 Lomi2g04357 . Ecan3g02160 Soca5g02498 Glco3g01140 Artr3g11579 Aary5g02793 . Aann4g01123 . . . . . . . Pdy4g00514 . . . . . . . . . . . . . . . . . . . . Cobi4g03098 Hean11g00794 Bial4g03394 Bial16g02789 . Dapi23g00347 . Hetu31g00593 Hetu33g00738 Amtr02g07007 Smso7g00052 Smso29g00057 Taer1g05488 Fro12g02377 Fso2g00253 Ftr4g03670 Fra11g02514 Fli1g00286 Stre6g00423 Mimi17g00022
Armi1g00467 Sain12g00426 . . Ccar2g02004 Cien5g03203 Cich4g04497 Lssa7g03459 Laca7g02805 . Tamo4g02869 Pslu1g21264 Lomi1g00300 Lomi2g04358 . Ecan3g02159 Soca5g02503 Glco3g01139 Artr3g11580 Aary5g02794 . Aann4g01124 . Chmo13g00776 . Chmo15g00662 Chla6g05948 Chna2g00639 Cind3g01647 Pdy4g00513 Cobi6g01365 Hean15g03933 Bial24g02221 Bial12g02362 . . Hetu17g02510 Hetu16g02620 Hetu18g02781 Amtr02g04086 . Smso13g00213 . . . . . . Stre9g01594 . . . . . . . . . . . . . . . . . . . . .
Armi1g00468 . Ceso2g03482 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00469 Sain12g00428 . Cati3g00536 Ccar2g02003 Cien5g03200 Cich4g04494 Lssa7g03458 Laca7g02803 . Tamo4g02870 Pslu1g21291 . . . Ecan3g02157 Soca5g02506 Glco3g01130 Artr3g11582 Aary5g02797 Aary13g03275 Aann4g01132 . . . . . . . Pdy4g00511 . . . . . . . . . . . . . . . . . . . . Cobi4g03107 Hean11g00781 Bial4g03405 Bial16g02800 Dapi7g00312 Dapi23g00342 Hetu32g00631 Hetu31g00580 Hetu33g00730 Amtr02g07019 Smso7g00055 Smso29g00061 Taer1g05493 Fro12g02382 Fso2g00247 Ftr4g03677 Fra11g02522 Fli1g00282 Stre6g00410 .
Armi1g00471 Sain12g00430 Ceso2g01357 Cati3g00537 Ccar2g02002 Cien5g03199 Cich4g04493 Lssa7g03457 Laca7g02802 Tako4g03962 Tamo4g02871 Pslu1g21298 . Lomi2g04360 . Ecan3g02156 Soca5g02507 Glco3g01128 . . . . Chma7g08112 Chmo13g00772 . Chmo15g00652 Chla6g05956 Chna2g00637 Cind3g01643 Pdy4g00510 Cobi6g01364 Hean15g03932 Bial24g02223 Bial12g02364 . . Hetu17g02512 Hetu16g02622 Hetu18g02783 Amtr02g04084 . . . . . . . . Stre9g01595 . . . . . . . . . . . . . . . . . . . . .
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00475 Sain12g00432 . Cati3g00538 Ccar2g02000 . Cich4g04488 Lssa7g03455 Laca7g02799 Tako4g03971 Tamo4g02873 Pslu1g21300 . . . . . Glco3g01124 Artr3g11591 . . Aann4g01135 . . . Chmo15g00648 Chla6g05958 Chna2g00635 Cind3g01639 Pdy4g00508 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
. . . . . . . . . . . . . . . . . . . . . . Chma7g08117 . . Chmo15g00647 . Chna2g00634 Cind3g01638 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00477 Sain12g00434 . Cati3g00540 Ccar2g01998 Cien5g03195 Cich4g04485 Lssa7g03453 Laca7g02796 Tako4g03974 Tamo4g02878 Pslu1g21302 Lomi1g00294 . . Ecan3g02152 . Glco3g01122 Artr3g11593 Aary5g02803 Aary13g03281 Aann4g01141 Chma7g08118 . . Chmo15g00646 Chla6g05960 Chna2g00633 Cind3g01637 Pdy4g00505 . Hean15g03929 Bial24g02226 Bial12g02368 . . Hetu17g02520 Hetu16g02632 Hetu18g02789 Amtr02g04079 . Smso13g00210 . . . . . . Stre9g01600 Mimi9g01324 . . . . . . . . . . . . . . . . . . . .
   
Gene_GFF
Select Chromosome Start End Strand Old_gene Gene Num
4 60751712 60754157 + chr4g0776211 Aann4g01122 1122
4 60754193 60755528 - chr4g0776221 Aann4g01123 1123
4 60793194 60804885 + chr4g0776261 Aann4g01124 1124
4 60949112 60950364 + chr4g0776381 Aann4g01132 1132
4 61005594 61010994 + chr4g0776441 Aann4g01135 1135
4 61021330 61023918 - chr4g0776501 Aann4g01141 1141
5 166389882 166391926 + Aargg5g27920.1 Aary5g02792 2792
5 166392368 166393524 - Aargg5g27930.1 Aary5g02793 2793
5 166396594 166398822 + Aargg5g27940.1 Aary5g02794 2794
5 166826320 166828208 + Aargg5g27970.1 Aary5g02797 2797
5 167072481 167074561 - Aargg5g28030.1 Aary5g02803 2803
13 194307986 194309354 + Aargg13g32750.1 Aary13g03275 3275
13 194462149 194464154 - Aargg13g32810.1 Aary13g03281 3281
2 81300034 81301745 + AtrifAMIRv0_Chr02g0136751 Amtr02g04079 4079
2 81329369 81331902 - AtrifAMIRv0_Chr02g0136801 Amtr02g04084 4084
2 81420488 81422957 - AtrifAMIRv0_Chr02g0136821 Amtr02g04086 4086
2 81453381 81455229 - AtrifAMIRv0_Chr02g0136831 Amtr02g04087 4087
2 128202960 128203992 - AtrifAMIRv0_Chr02g0166031 Amtr02g07007 7007
2 128688941 128690110 + AtrifAMIRv0_Chr02g0166151 Amtr02g07019 7019
1 9272475 9274388 + AmiAMIRv0_Chr01g0004651 Armi1g00465 465
1 9274900 9276551 - AmiAMIRv0_Chr01g0004661 Armi1g00466 466
1 9295424 9298118 + AmiAMIRv0_Chr01g0004671 Armi1g00467 467
1 9332713 9335627 - AmiAMIRv0_Chr01g0004681 Armi1g00468 468
1 9360882 9361940 + AmiAMIRv0_Chr01g0004691 Armi1g00469 469
1 9376503 9378501 + AmiAMIRv0_Chr01g0004711 Armi1g00471 471
1 9417451 9423217 + AmiAMIRv0_Chr01g0004751 Armi1g00475 475
1 9425258 9427122 - AmiAMIRv0_Chr01g0004771 Armi1g00477 477
3 392089296 392091031 + AtridAMIRv0_Chr03g0423141 Artr3g11578 11578
3 392091478 392092648 - AtridAMIRv0_Chr03g0423151 Artr3g11579 11579
3 392131988 392135619 + AtridAMIRv0_Chr03g0423161 Artr3g11580 11580
3 392230748 392231731 + AtridAMIRv0_Chr03g0423181 Artr3g11582 11582
3 392407208 392411725 + AtridAMIRv0_Chr03g0423271 Artr3g11591 11591
3 392420360 392422445 - AtridAMIRv0_Chr03g0423291 Artr3g11593 11593
4 77324549 77325697 - g43233.t1 Bial4g03394 3394
4 77514721 77515745 + g43244.t1 Bial4g03405 3405
12 53932883 53934165 + g35560.t1 Bial12g02361 2361
12 53939134 53940629 + g35561.t1 Bial12g02362 2362
12 53974487 53976423 + g35563.t1 Bial12g02364 2364
12 53990472 53992884 - g35567.t1 Bial12g02368 2368
16 71536036 71537149 - g127411.t1 Bial16g02789 2789
16 71777394 71778403 + g127400.t1 Bial16g02800 2800
24 52801359 52802854 + g67887.t1 Bial24g02221 2221
24 52836712 52838648 + g67889.t1 Bial24g02223 2223
24 52845127 52855109 - g67892.t1 Bial24g02226 2226
3 5181197 5187213 - CtAH03T0036100.1 Cati3g00515 515
3 5181509 5184484 + CtAH03T0036200.1 Cati3g00516 516
3 5384654 5400442 + CtAH03T0037400.1 Cati3g00536 536
3 5396042 5400442 + CtAH03T0037400.2 Cati3g00537 537
3 5413473 5419567 + CtAH03T0037500.1 Cati3g00538 538
3 5425322 5427524 - CtAH03T0037700.1 Cati3g00540 540
2 66875169 66877082 + gnl|WGS:LEKV|Ccrd_011045.mRNA.1_mrna Ccar2g01998 1998
2 66881422 66887263 - gnl|WGS:LEKV|Ccrd_011047.mRNA.1_mrna Ccar2g02000 2000
2 66910828 66912731 - gnl|WGS:LEKV|Ccrd_011049.mRNA.1_mrna Ccar2g02002 2002
2 66914124 66915401 - gnl|WGS:LEKV|Ccrd_011050.mRNA.1_mrna Ccar2g02003 2003
2 66918740 66931965 - gnl|WGS:LEKV|Ccrd_011051.mRNA.1_mrna Ccar2g02004 2004
2 66935688 66943466 + gnl|WGS:LEKV|Ccrd_011052.mRNA.1_mrna Ccar2g02005 2005
2 66943754 66946148 - gnl|WGS:LEKV|Ccrd_011053.mRNA.1_mrna Ccar2g02006 2006
2 27337001 27339770 + >KAJ9560789.1 Ceso2g01357 1357
2 85793018 85795952 - >KAJ9562859.1 Ceso2g03482 3482
6 239506509 239508534 + ClaG1_Chr06g0431931 Chla6g05946 5946
6 239550466 239552456 + ClaG1_Chr06g0431951 Chla6g05948 5948
6 239841870 239843674 + ClaG1_Chr06g0432031 Chla6g05956 5956
6 239876990 239882574 + ClaG1_Chr06g0432051 Chla6g05958 5958
6 239886818 239888902 - ClaG1_Chr06g0432071 Chla6g05960 5960
7 276677012 276678987 + CmaNakai_Chr07g0704141 Chma7g08112 8112
7 276714018 276715078 + CmaNakai_Chr07g0704191 Chma7g08117 8117
7 276715909 276717983 - CmaNakai_Chr07g0704201 Chma7g08118 8118
13 38636740 38639128 - evm.model.scaffold_461.118 Chmo13g00772 772
13 38840514 38850567 - evm.model.scaffold_461.132 Chmo13g00776 776
13 38911909 38914407 - evm.model.scaffold_461.136 Chmo13g00778 778
15 35504755 35506820 + evm.model.scaffold_126.78 Chmo15g00646 646
15 35506353 35509298 - evm.model.scaffold_126.77 Chmo15g00647 647
15 35510987 35515242 - evm.model.scaffold_126.76 Chmo15g00648 648
15 35652404 35654432 - evm.model.scaffold_126.71 Chmo15g00652 652
15 36025549 36025926 - evm.model.scaffold_126.36 Chmo15g00662 662
15 36081329 36083405 - evm.model.scaffold_126.27 Chmo15g00664 664
2 46387301 46390258 + Cn0653140 Chna2g00633 633
2 46389361 46391838 - Cn0653130 Chna2g00634 634
2 46393796 46399089 - Cn0653120 Chna2g00635 635
2 46493031 46495292 - Cn0653090 Chna2g00637 637
2 46742150 46751577 - Cn0653000 Chna2g00639 639
2 46821171 46823570 - Cn0652980 Chna2g00640 640
4 130895165 130896358 + KAI3753620.1 Cich4g04485 4485
4 130899441 130902857 - KAI3753623.1 Cich4g04488 4488
4 130966298 130967251 - KAI3753628.1 Cich4g04493 4493
4 130975353 130975798 - KAI3753629.1 Cich4g04494 4494
4 131025387 131027177 - KAI3753632.1 Cich4g04497 4497
4 131056445 131057068 + KAI3753633.1 Cich4g04498 4498
4 131057999 131059680 - KAI3753634.1 Cich4g04499 4499
5 77334280 77337519 + KAI3509715.1 Cien5g03195 3195
5 77385807 77386757 - KAI3509719.1 Cien5g03199 3199
5 77392869 77393922 - KAI3509720.1 Cien5g03200 3200
5 77427832 77429058 - KAI3509723.1 Cien5g03203 3203
5 77440953 77441573 + KAI3509725.1 Cien5g03205 3205
5 77442556 77444109 - KAI3509726.1 Cien5g03206 3206
3 331789428 331791511 - D.indicum_Contig189_G00001.t1 Cind3g01637 1637
3 331787442 331788094 + D.indicum_Contig189_G00002.t1 Cind3g01638 1638
3 331780400 331785117 + D.indicum_Contig189_G00003.t1 Cind3g01639 1639
3 331530883 331532605 + D.indicum_Contig189_G00007.t1 Cind3g01643 1643
3 331106373 331113843 + D.indicum_Contig189_G00011.t1 Cind3g01647 1647
3 330925672 330927692 + D.indicum_Contig189_G00013.t1 Cind3g01649 1649
4 80401546 80402507 - h2tg000009l_1.g42181.t1 Cobi4g03098 3098
4 80518052 80519086 + h2tg000009l_1.g42172.t1 Cobi4g03107 3107
6 11070070 11072046 - h2tg000021l_1.g11312.t1 Cobi6g01364 1364
6 11073930 11083952 - h2tg000021l_1.g11311.t1 Cobi6g01365 1365
6 11092952 11094247 - h2tg000021l_1.g11309.t1 Cobi6g01367 1367
7 6455164 6456217 - h1tg000030l.g76902.t1 Dapi7g00312 312
23 7160370 7161405 - h2tg000284l.g80703.t1 Dapi23g00342 342
23 7490564 7491315 + h2tg000233l.g74311.t1 Dapi23g00347 347
3 32342541 32344448 + XM_043764695.1 Ecan3g02152 2152
3 32387881 32391011 - XM_043764930.1 Ecan3g02156 2156
3 32392106 32393224 - XM_043766940.1 Ecan3g02157 2157
3 32409173 32411998 - XM_043766261.1 Ecan3g02159 2159
3 32416121 32417754 + XM_043766830.1 Ecan3g02160 2160
3 32417848 32420598 - XM_043766829.1 Ecan3g02161 2161
1 5625174 5626582 - FliAMIRv0_Chr01g0002771 Fli1g00282 282
1 5696525 5697359 + FliAMIRv0_Chr01g0002811 Fli1g00286 286
11 78802619 78803447 - FraAMIRv0_Chr11g0225361 Fra11g02514 2514
11 78841273 78842617 + FraAMIRv0_Chr11g0225441 Fra11g02522 2522
12 31510550 31511701 - FroAMIRv0_Chr12g0219251 Fro12g02377 2377
12 31551320 31552895 + FroAMIRv0_Chr12g0219301 Fro12g02382 2382
2 3435629 3437038 - FsoAMIRv0_Chr02g0030661 Fso2g00247 247
2 3509287 3510285 + FsoAMIRv0_Chr02g0030721 Fso2g00253 253
4 120517513 120518333 - FtrAMIRv0_Chr04g0131041 Ftr4g03670 3670
4 120564470 120565820 + FtrAMIRv0_Chr04g0131111 Ftr4g03677 3677
3 68577207 68579261 + GcoAMIRv0_Chr03g0167511 Glco3g01122 1122
3 68664056 68668497 - GcoAMIRv0_Chr03g0167531 Glco3g01124 1124
3 68839005 68841113 - GcoAMIRv0_Chr03g0167571 Glco3g01128 1128
3 68845180 68846172 - GcoAMIRv0_Chr03g0167591 Glco3g01130 1130
3 69351770 69353504 - GcoAMIRv0_Chr03g0167681 Glco3g01139 1139
3 69468679 69469838 + GcoAMIRv0_Chr03g0167691 Glco3g01140 1140
3 69470297 69472635 - GcoAMIRv0_Chr03g0167701 Glco3g01141 1141
11 17813461 17814763 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0475091 Hean11g00781 781
11 18239905 18240730 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0475241 Hean11g00794 794
15 150361812 150364144 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0716411 Hean15g03929 3929
15 150661767 150664230 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0716441 Hean15g03932 3932
15 150666447 150677470 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0716451 Hean15g03933 3933
15 150777414 150779643 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0716471 Hean15g03935 3935
16 139616173 139618922 + >Htub.h1tg001448l.g85.t1 Hetu16g02617 2617
16 139781379 139784160 + >Htub.h1tg001448l.g88.t1 Hetu16g02620 2620
16 139943066 139945318 + >Htub.h1tg001448l.g90.t1 Hetu16g02622 2622
16 140238973 140241017 - >Htub.h1tg001448l.g100.t1 Hetu16g02632 2632
17 132010926 132012461 + >Htub.h1tg000886l.g468.t1 Hetu17g02507 2507
17 132029273 132031544 + >Htub.h1tg000886l.g465.t1 Hetu17g02510 2510
17 132079651 132081896 + >Htub.h1tg000886l.g463.t1 Hetu17g02512 2512
17 132608194 132609813 - >Htub.h1tg000886l.g455.t1 Hetu17g02520 2520
18 139870526 139872061 + >Htub.h1tg002759l.g143.t1 Hetu18g02778 2778
18 139888783 139891138 + >Htub.h1tg002759l.g146.t1 Hetu18g02781 2781
18 139939261 139941505 + >Htub.h1tg002759l.g148.t1 Hetu18g02783 2783
18 140456900 140458519 - >Htub.h1tg002759l.g154.t1 Hetu18g02789 2789
31 21995262 21996313 - >Htub.h1tg001429l.g282.t1 Hetu31g00580 580
31 23579218 23579865 + >Htub.h1tg001429l.g268.t1 Hetu31g00593 593
32 26547239 26548268 - >Htub.h1tg002251l.g261.t1 Hetu32g00631 631
33 27343190 27344219 - >Htub.h1tg001292l.g319.t1 Hetu33g00730 730
33 27950832 27951856 + >Htub.h1tg001292l.g328.t1 Hetu33g00738 738
7 134690921 134692284 + CAI9294984.1 Laca7g02796 2796
7 134753843 134758062 - CAI9294987.1 Laca7g02799 2799
7 134819718 134821106 - CAI9294990.1 Laca7g02802 2802
7 134822039 134823188 - CAI9294991.1 Laca7g02803 2803
7 134839919 134841143 - CAI9294993.1 Laca7g02805 2805
7 134845782 134846540 + CAI9294995.1 Laca7g02807 2807
7 134847159 134849431 - CAI9294996.1 Laca7g02808 2808
1 2538436 2540111 + LmiAMIRv0_Chr01g0002941 Lomi1g00294 294
1 2575033 2577417 - LmiAMIRv0_Chr01g0003001 Lomi1g00300 300
1 2581905 2582977 + LmiAMIRv0_Chr01g0003011 Lomi1g00301 301
1 2583561 2585608 - LmiAMIRv0_Chr01g0003021 Lomi1g00302 302
2 48914569 48916332 + LmiAMIRv0_Chr02g0088891 Lomi2g04356 4356
2 48916878 48917903 - LmiAMIRv0_Chr02g0088901 Lomi2g04357 4357
2 48920848 48923219 + LmiAMIRv0_Chr02g0088911 Lomi2g04358 4358
2 48942457 48944619 + LmiAMIRv0_Chr02g0088931 Lomi2g04360 4360
7 183031505 183032839 + >KAJ0198032.1 Lssa7g03453 3453
7 183120934 183124682 - >KAJ0195056.1 Lssa7g03455 3455
7 183245040 183246319 - >KAJ0195974.1 Lssa7g03457 3457
7 183247055 183249030 - >KAJ0198484.1 Lssa7g03458 3458
7 183257043 183260735 - >KAJ0197872.1 Lssa7g03459 3459
7 183276875 183277467 + >KAJ0196390.1 Lssa7g03460 3460
7 183278101 183280262 - >KAJ0194889.1 Lssa7g03461 3461
9 36697970 36715881 - KAD5318059.1 Mimi9g01324 1324
9 49363069 49364849 - KAD5318183.1 Mimi9g01448 1448
17 595483 604683 + KAD3066344.1 Mimi17g00022 22
4 9501969 9503917 + PdyAMIRv0_Chr04g0153121 Pdy4g00505 505
4 9560409 9565327 - PdyAMIRv0_Chr04g0153151 Pdy4g00508 508
4 9589197 9591526 - PdyAMIRv0_Chr04g0153171 Pdy4g00510 510
4 9604608 9605913 - PdyAMIRv0_Chr04g0153181 Pdy4g00511 511
4 9618888 9621051 - PdyAMIRv0_Chr04g0153201 Pdy4g00513 513
4 9638187 9638837 + PdyAMIRv0_Chr04g0153211 Pdy4g00514 514
4 9639295 9641166 - PdyAMIRv0_Chr04g0153221 Pdy4g00515 515
1 152863194 152864967 + PluAMIRv0_Chr01g0211671 Pslu1g21261 21261
1 152865519 152866619 - PluAMIRv0_Chr01g0211681 Pslu1g21262 21262
1 152875395 152877840 + PluAMIRv0_Chr01g0211701 Pslu1g21264 21264
1 153027262 153028294 - PluAMIRv0_Chr01g0211971 Pslu1g21291 21291
1 153099655 153101792 + PluAMIRv0_Chr01g0212041 Pslu1g21298 21298
1 153108449 153112877 + PluAMIRv0_Chr01g0212061 Pslu1g21300 21300
1 153116723 153118419 - PluAMIRv0_Chr01g0212081 Pslu1g21302 21302
12 8918185 8920047 + SinAMIRv0_Chr12g0359871 Sain12g00423 423
12 8920818 8921704 - SinAMIRv0_Chr12g0359881 Sain12g00424 424
12 8927006 8928313 + SinAMIRv0_Chr12g0359901 Sain12g00426 426
12 8961861 8963010 + SinAMIRv0_Chr12g0359921 Sain12g00428 428
12 9008650 9010647 + SinAMIRv0_Chr12g0359941 Sain12g00430 430
12 9074635 9078559 + SinAMIRv0_Chr12g0359961 Sain12g00432 432
12 9085867 9087785 - SinAMIRv0_Chr12g0359981 Sain12g00434 434
7 924182 925036 - KAI3809632.1 Smso7g00052 52
7 1002979 1004255 + KAI3809635.1 Smso7g00055 55
13 14940404 14942161 + KAI3786467.1 Smso13g00210 210
13 15154012 15158532 - KAI3786470.1 Smso13g00213 213
13 15246297 15248005 - KAI3786471.1 Smso13g00214 214
29 1067102 1067884 - KAI3675051.1 Smso29g00057 57
29 1242856 1244025 + KAI3675055.1 Smso29g00061 61
5 27019452 27022236 + transfrag11133.t01 Soca5g02496 2496
5 27022253 27023961 - transfrag11134.t01 Soca5g02498 2498
5 27053199 27062862 + transfrag11137.t01 Soca5g02503 2503
5 27090632 27091891 + transfrag11139.t01 Soca5g02506 2506
5 27092284 27095421 + transfrag11140.t01 Soca5g02507 2507
6 11031122 11032171 - Streb.6G004100.1 Stre6g00410 410
6 11229067 11230338 + Streb.6G004230.1 Stre6g00423 423
9 28057872 28060295 + Streb.9G015920.1 Stre9g01592 1592
9 28110974 28113055 + Streb.9G015940.1 Stre9g01594 1594
9 28121569 28123121 + Streb.9G015950.1 Stre9g01595 1595
9 28139472 28142131 - Streb.9G016000.1 Stre9g01600 1600
1 50129710 50130308 - >KAK1439668.1 Taer1g05488 5488
1 50148202 50149228 + >KAK1439673.1 Taer1g05493 5493
4 88880240 88882470 + TkA04G352380.1 Tako4g03951 3951
4 88883673 88884265 - TkA04G352390.1 Tako4g03952 3952
4 89133954 89136172 + TkA04G353220.1 Tako4g03962 3962
4 89282869 89287475 + TkA04G353960.1 Tako4g03971 3971
4 89306102 89308743 - TkA04G354030.2 Tako4g03974 3974
4 54386514 54388411 + TbA04G029060.1 Tamo4g02862 2862
4 54390301 54391393 - TbA04G029050.1 Tamo4g02863 2863
4 54475068 54477334 + TbA04G028940.1 Tamo4g02869 2869
4 54481629 54483213 + TbA04G028930.1 Tamo4g02870 2870
4 54483964 54484794 + TbA04G028920.1 Tamo4g02871 2871
4 54495340 54502008 + TbA04G028890.1 Tamo4g02873 2873
4 54630117 54632011 - TbA04G028770.1 Tamo4g02878 2878
       
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