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AGRP

Asteraceae Genomic Research Platform

Gene Search

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Hierarchical alignments with the Arctium lappa genome as reference

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Asteraceae genomes. We used Arctium lappa as a reference, and by comparing homologous gene locus maps and Ks values between Arctium lappa and other Asteraceae, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We constructed a 74×31,441 macro-matrices.


Select Armi_1 Sain_1 Ceso_1 Cati_1 Ccar_1 Cien_1 Cich_1 Lssa_1 Laca_1 Tako_1 Tamo_1 Pslu_1 Lomi_1 Lomi_2 Enbr_1 Ecan_1 Soca_1 Glco_1 Artr_1 Aary_1 Aary_2 Aann_1 Chma_1 Chmo_1 Chmo_2 Chmo_3 Chla_1 Chna_1 Cind_1 Pdy_1 Cobi_1 Hean_1 Bial_1 Bial_2 Dapi_1 Dapi_2 Hetu_1 Hetu_2 Hetu_3 Amtr_1 Smso_1 Smso_2 Taer_1 Fro_1 Fso_1 Ftr_1 Fra_1 Fli_1 Stre_1 Mimi_1 Cobi_2 Hean_2 Bial_3 Bial_4 Dapi_3 Dapi_4 Hetu_4 Hetu_5 Hetu_6 Amtr_2 Smso_3 Smso_4 Taer_2 Fro_2 Fso_2 Ftr_2 Fra_2 Fli_2 Stre_2 Mimi_2
Armi1g00334 Sain12g00304 Ceso2g03401 Cati3g00365 . Cien5g03345 Cich4g04643 Lssa7g03609 . . . Pslu1g21062 Lomi1g00367 Lomi2g04292 . Ecan3g02258 Soca5g02343 Glco3g01307 Artr3g11278 . . Aann4g00993 . . . . . . . Pdy4g00631 Cobi6g01411 Hean15g04018 . . . . . . . Amtr02g04146 . . . . . . . . . . Cobi4g02994 Hean11g00981 . . . . . . . Amtr02g06799 Smso7g00363 Smso29g00410 Taer1g05405 Fro12g02287 Fso2g00325 Ftr4g03594 Fra11g02448 Fli1g00365 Stre6g00511 Mimi17g00532
Armi1g00335 Sain12g00305 Ceso2g03402 Cati3g00367 . Cien5g03344 Cich4g04642 Lssa7g03608 Laca7g02937 . Tamo4g02644 Pslu1g21063 Lomi1g00366 Lomi2g04293 . Ecan3g02256 Soca5g02614 Glco3g01303 Artr3g11279 . Aary13g03220 Aann4g00994 . . . . . . . Pdy4g00630 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00336 Sain12g00306 . Cati3g00368 . . . . . . . Pslu1g21067 . . . Ecan3g02254 Soca5g02613 . . . . . . Chmo13g00901 Chmo14g00860 Chmo15g00792 Chla6g05775 Chna2g00766 Cind3g05644 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00337 Sain12g00307 Ceso2g03403 Cati3g00370 . Cien5g03342 Cich4g04640 Lssa7g03601 . . . Pslu1g21068 Lomi1g00365 Lomi2g04294 Enbr6g00701 Ecan3g02253 Soca5g02612 Glco3g01297 Artr3g11291 . Aary13g03222 Aann4g00997 . Chmo13g00900 . Chmo15g00791 . Chna2g00764 Cind3g05645 Pdy4g00628 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00338 Sain12g00309 Ceso2g03404 Cati3g00372 . . . . . . . Pslu1g21069 . Lomi2g04295 Enbr6g00702 Ecan3g02252 Soca5g02611 . . . . . . Chmo13g00899 . Chmo15g00790 Chla6g05780 Chna2g00763 Cind3g05646 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00339 Sain12g00311 Ceso2g03405 Cati3g00373 . Cien5g03340 Cich4g04638 Lssa7g03599 Laca7g02932 . Tamo4g02678 . . . Enbr6g00703 Ecan3g02251 Soca5g03893 Glco3g01294 Artr3g11295 . Aary13g03224 Aann4g01000 . Chmo13g00898 . Chmo15g00788 Chla6g05781 Chna2g00762 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00341 . . Cati3g00374 . Cien5g03339 Cich4g04635 Lssa7g03597 Laca7g02930 . Tamo4g02679 . Lomi1g00364 . Enbr6g00704 Ecan3g02250 Soca5g02609 Glco3g01287 Artr3g11296 . Aary13g03225 Aann4g01001 Chma7g07868 Chmo13g00897 . Chmo15g00787 Chla6g05782 Chna2g00761 Cind3g05648 Pdy4g00626 . . . . . . . . . . . . . . . . . . . . Cobi4g03001 Hean11g00978 Bial4g03269 Bial16g02670 Dapi7g00404 Dapi23g00431 Hetu32g00785 Hetu31g00727 Hetu33g00849 Amtr02g06805 Smso7g00359 Smso29g00406 Taer1g05409 Fro12g02290 Fso2g00321 Ftr4g03597 Fra11g02452 Fli1g00362 Stre6g00507 Mimi17g00527
Armi1g00343 Sain12g00312 . Cati3g00376 . . . . . . . Pslu1g21071 . Lomi2g04297 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00344 Sain12g00313 Ceso2g03406 Cati3g00377 . Cien5g03337 Cich4g04634 Lssa7g03596 Laca7g02929 . Tamo4g02681 Pslu1g21072 Lomi1g00363 Lomi2g04298 Enbr6g00705 Ecan3g02249 Soca5g02607 Glco3g01286 . . Aary13g03226 Aann4g01002 Chma7g07869 Chmo13g00896 . Chmo15g00786 Chla6g05783 Chna2g00760 Cind3g05649 Pdy4g00624 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
. . . Cati3g00378 . Cien5g03336 Cich4g04632 Lssa7g03595 Laca7g02928 . Tamo4g02682 . Lomi1g00362 . . Ecan3g02248 Soca5g02601 Glco3g01285 . . . Aann4g01003 Chma7g07871 Chmo13g00894 . . Chla6g05784 Chna2g00759 . Pdy4g00623 Cobi6g01407 Hean15g04015 . . . . . . . Amtr02g04142 . . . . . . . . . . Cobi6g01407 Hean11g00971 Bial12g02318 Bial16g02674 Dapi7g00399 Dapi23g00427 Hetu32g00781 Hetu31g00723 Hetu33g00845 . Smso7g00355 Smso29g00402 Taer1g05412 Fro12g02293 Fso2g00315 Ftr4g03599 Fra11g02455 Fli1g00359 Stre6g00503 Mimi17g00519
   
Gene_GFF
Select Chromosome Start End Strand Old_gene Gene Num
4 56657647 56661911 + chr4g0772411 Aann4g00993 993
4 56662205 56663057 - chr4g0772421 Aann4g00994 994
4 56727305 56732572 + chr4g0772511 Aann4g00997 997
4 56780131 56790373 + chr4g0772561 Aann4g01000 1000
4 56792392 56794835 + chr4g0772571 Aann4g01001 1001
4 56795748 56801386 - chr4g0772581 Aann4g01002 1002
4 56808748 56814931 - chr4g0772591 Aann4g01003 1003
13 190494325 190494996 - Aargg13g32200.1 Aary13g03220 3220
13 190629865 190634936 + Aargg13g32220.1 Aary13g03222 3222
13 190741014 190744549 + Aargg13g32240.1 Aary13g03224 3224
13 190783285 190785853 + Aargg13g32250.1 Aary13g03225 3225
13 190816908 190820012 - Aargg13g32260.1 Aary13g03226 3226
2 82132929 82139098 + AtrifAMIRv0_Chr02g0137381 Amtr02g04142 4142
2 82191383 82199413 + AtrifAMIRv0_Chr02g0137421 Amtr02g04146 4146
2 123339283 123342602 + AtrifAMIRv0_Chr02g0163951 Amtr02g06799 6799
2 123503236 123505152 - AtrifAMIRv0_Chr02g0164011 Amtr02g06805 6805
1 6153388 6157505 + AmiAMIRv0_Chr01g0003341 Armi1g00334 334
1 6157832 6158653 - AmiAMIRv0_Chr01g0003351 Armi1g00335 335
1 6167294 6168037 + AmiAMIRv0_Chr01g0003361 Armi1g00336 336
1 6182616 6189401 + AmiAMIRv0_Chr01g0003371 Armi1g00337 337
1 6191366 6193737 + AmiAMIRv0_Chr01g0003381 Armi1g00338 338
1 6195421 6200487 + AmiAMIRv0_Chr01g0003391 Armi1g00339 339
1 6223532 6225010 + AmiAMIRv0_Chr01g0003411 Armi1g00341 341
1 6279398 6280856 + AmiAMIRv0_Chr01g0003431 Armi1g00343 343
1 6284834 6289357 - AmiAMIRv0_Chr01g0003441 Armi1g00344 344
3 380760537 380764388 + AtridAMIRv0_Chr03g0420141 Artr3g11278 11278
3 380764972 380765681 - AtridAMIRv0_Chr03g0420151 Artr3g11279 11279
3 381427561 381433185 + AtridAMIRv0_Chr03g0420271 Artr3g11291 11291
3 381596701 381601206 + AtridAMIRv0_Chr03g0420311 Artr3g11295 11295
3 381645950 381648429 + AtridAMIRv0_Chr03g0420321 Artr3g11296 11296
4 75115560 75117535 - g43108.t1 Bial4g03269 3269
12 53458276 53464745 - g35517.t1 Bial12g02318 2318
16 69259518 69261490 - g149912.t1 Bial16g02670 2670
16 69315997 69321978 - g149908.t1 Bial16g02674 2674
3 3033180 3050536 + CtAH03T0025400.3 Cati3g00365 365
3 3055423 3056258 - CtAH03T0025500.1 Cati3g00367 367
3 3070481 3071230 + CtAH03T0025600.1 Cati3g00368 368
3 3087261 3094318 + CtAH03T0025700.2 Cati3g00370 370
3 3096484 3099373 + CtAH03T0025800.1 Cati3g00372 372
3 3100438 3104757 + CtAH03T0025900.1 Cati3g00373 373
3 3111169 3113335 - CtAH03T0026000.1 Cati3g00374 374
3 3130553 3132593 + CtAH03T0026200.1 Cati3g00376 376
3 3136845 3142289 - CtAH03T0026300.1 Cati3g00377 377
3 3144760 3154597 - CtAH03T0026400.2 Cati3g00378 378
2 84317021 84322841 + >KAJ9563256.1 Ceso2g03401 3401
2 84323234 84324087 - >KAJ9563259.1 Ceso2g03402 3402
2 84352202 84358873 + >KAJ9563254.1 Ceso2g03403 3403
2 84360815 84363343 + >KAJ9563253.1 Ceso2g03404 3404
2 84364860 84368535 + >KAJ9563255.1 Ceso2g03405 3405
2 84385213 84390572 - >KAJ9562658.1 Ceso2g03406 3406
6 230148470 230149171 - ClaG1_Chr06g0430221 Chla6g05775 5775
6 230320891 230323025 + ClaG1_Chr06g0430271 Chla6g05780 5780
6 230332296 230337405 + ClaG1_Chr06g0430281 Chla6g05781 5781
6 230349419 230351710 + ClaG1_Chr06g0430291 Chla6g05782 5782
6 230408136 230411284 - ClaG1_Chr06g0430301 Chla6g05783 5783
6 230435940 230437297 - ClaG1_Chr06g0430311 Chla6g05784 5784
7 269228720 269230640 + CmaNakai_Chr07g0701701 Chma7g07868 7868
7 269233306 269236041 - CmaNakai_Chr07g0701711 Chma7g07869 7869
7 269248670 269251425 - CmaNakai_Chr07g0701731 Chma7g07871 7871
13 46515286 46517268 + evm.model.scaffold_191.51 Chmo13g00894 894
13 46585601 46589229 + evm.model.scaffold_191.54 Chmo13g00896 896
13 46618882 46620955 - evm.model.scaffold_191.59 Chmo13g00897 897
13 46626245 46630865 - evm.model.scaffold_191.60 Chmo13g00898 898
13 46664424 46666565 - evm.model.scaffold_191.62.1 Chmo13g00899 899
13 46679246 46684793 - evm.model.scaffold_191.63 Chmo13g00900 900
13 46880175 46881006 - evm.model.scaffold_191.73 Chmo13g00901 901
14 41715023 41716393 - evm.model.scaffold_25.396 Chmo14g00860 860
15 45149808 45152988 + evm.model.scaffold_1806.530 Chmo15g00786 786
15 45186697 45188775 - evm.model.scaffold_1806.529 Chmo15g00787 787
15 45193190 45198251 - evm.model.scaffold_1806.528 Chmo15g00788 788
15 45220557 45223013 - evm.model.scaffold_1806.526.1 Chmo15g00790 790
15 45267698 45273264 - evm.model.scaffold_1806.525 Chmo15g00791 791
15 45392203 45393034 - evm.model.scaffold_1806.522 Chmo15g00792 792
2 57744215 57755767 + Cn0026860 Chna2g00759 759
2 57764372 57768005 + Cn0026870 Chna2g00760 760
2 57785132 57787099 - Cn0026880 Chna2g00761 761
2 57791286 57796916 - Cn0026890 Chna2g00762 762
2 57813518 57815662 - Cn0026900 Chna2g00763 763
2 57852736 57858404 - Cn0026930 Chna2g00764 764
2 58162711 58163415 - Cn0026440 Chna2g00766 766
4 133667459 133675496 + KAI3753767.1 Cich4g04632 4632
4 133683397 133685257 + KAI3753769.1 Cich4g04634 4634
4 133688201 133689478 - KAI3753770.1 Cich4g04635 4635
4 133734595 133737694 - KAI3753773.1 Cich4g04638 4638
4 133750590 133753854 - KAI3753775.1 Cich4g04640 4640
4 133797350 133798039 + KAI3753777.1 Cich4g04642 4642
4 133843648 133846997 - KAI3753778.1 Cich4g04643 4643
5 79021532 79026185 + KAI3509856.1 Cien5g03336 3336
5 79030868 79032726 + KAI3509857.1 Cien5g03337 3337
5 79044758 79046564 - KAI3509859.1 Cien5g03339 3339
5 79080091 79083964 - KAI3509860.1 Cien5g03340 3340
5 79089430 79092740 - KAI3509862.1 Cien5g03342 3342
5 79121242 79121983 + KAI3509864.1 Cien5g03344 3344
5 79133830 79138621 - KAI3509865.1 Cien5g03345 3345
3 322562551 322563252 + D.indicum_Contig84_G00076.t1 Cind3g05644 5644
3 322643505 322648050 + D.indicum_Contig84_G00077.t1 Cind3g05645 5645
3 322649192 322650429 + D.indicum_Contig84_G00078.t1 Cind3g05646 5646
3 322667759 322681311 + D.indicum_Contig84_G00080.t1 Cind3g05648 5648
3 322736186 322739245 - D.indicum_Contig84_G00081.t1 Cind3g05649 5649
4 78871122 78875940 + h2tg000009l_1.g42285.t1 Cobi4g02994 2994
4 78911661 78913720 - h2tg000009l_1.g42278.t1 Cobi4g03001 3001
6 11419087 11425541 + h2tg000021l_1.g11269.t1 Cobi6g01407 1407
6 11448519 11451045 + h2tg000021l_1.g11265.t1 Cobi6g01411 1411
7 8708730 8719544 + h1tg000030l.g76989.t1 Dapi7g00399 399
7 8819625 8821287 + h1tg000030l.g76994.t1 Dapi7g00404 404
23 9437120 9446542 + h2tg000233l.g74391.t1 Dapi23g00427 427
23 9505770 9507412 + h2tg000233l.g74395.t1 Dapi23g00431 431
3 33351041 33357405 + XM_043765381.1 Ecan3g02248 2248
3 33359603 33362664 + XM_043763587.1 Ecan3g02249 2249
3 33368024 33369498 - XM_043766985.1 Ecan3g02250 2250
3 33372717 33376289 - XM_043766620.1 Ecan3g02251 2251
3 33377828 33379591 - XM_043766619.1 Ecan3g02252 2252
3 33380842 33386928 - XM_043766618.1 Ecan3g02253 2253
3 33398765 33399759 - XM_043767000.1 Ecan3g02254 2254
3 33437389 33438167 + XM_043762777.1 Ecan3g02256 2256
3 33441624 33445596 - XM_043763441.1 Ecan3g02258 2258
6 25714581 25720137 + evm.model.ctg3549.2 Enbr6g00701 701
6 25731757 25732154 + evm.model.ctg3549.4 Enbr6g00702 702
6 25736424 25740067 + evm.model.ctg3549.6 Enbr6g00703 703
6 25751733 25753193 + evm.model.ctg3549.8 Enbr6g00704 704
6 25759689 25762243 - evm.model.ctg3549.9 Enbr6g00705 705
1 7269848 7275085 + FliAMIRv0_Chr01g0003541 Fli1g00359 359
1 7336126 7338298 + FliAMIRv0_Chr01g0003571 Fli1g00362 362
1 7386249 7389340 - FliAMIRv0_Chr01g0003601 Fli1g00365 365
11 78205738 78208867 + FraAMIRv0_Chr11g0224701 Fra11g02448 2448
11 78231456 78233458 - FraAMIRv0_Chr11g0224741 Fra11g02452 2452
11 78263080 78268191 - FraAMIRv0_Chr11g0224771 Fra11g02455 2455
12 30351555 30354581 + FroAMIRv0_Chr12g0218351 Fro12g02287 2287
12 30369622 30370023 - FroAMIRv0_Chr12g0218381 Fro12g02290 2290
12 30402298 30407498 - FroAMIRv0_Chr12g0218411 Fro12g02293 2293
2 4294813 4300040 + FsoAMIRv0_Chr02g0031341 Fso2g00315 315
2 4407372 4409435 + FsoAMIRv0_Chr02g0031401 Fso2g00321 321
2 4438795 4484577 - FsoAMIRv0_Chr02g0031431 Fso2g00325 325
4 119388027 119391158 + FtrAMIRv0_Chr04g0130281 Ftr4g03594 3594
4 119408792 119410727 - FtrAMIRv0_Chr04g0130311 Ftr4g03597 3597
4 119457572 119460735 - FtrAMIRv0_Chr04g0130331 Ftr4g03599 3599
3 81438940 81454204 + GcoAMIRv0_Chr03g0169141 Glco3g01285 1285
3 81540584 81543392 + GcoAMIRv0_Chr03g0169151 Glco3g01286 1286
3 81763221 81765193 - GcoAMIRv0_Chr03g0169161 Glco3g01287 1287
3 82499137 82503589 - GcoAMIRv0_Chr03g0169231 Glco3g01294 1294
3 82689726 82694776 - GcoAMIRv0_Chr03g0169261 Glco3g01297 1297
3 82976102 82976786 + GcoAMIRv0_Chr03g0169321 Glco3g01303 1303
3 83093200 83098896 - GcoAMIRv0_Chr03g0169361 Glco3g01307 1307
11 24641404 24644508 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0477241 Hean11g00971 971
11 24802537 24804559 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0477331 Hean11g00978 978
11 24905711 24909878 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0477361 Hean11g00981 981
15 156378447 156385264 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0717471 Hean15g04015 4015
15 156519798 156523334 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0717511 Hean15g04018 4018
31 31474428 31479331 + >Htub.h1tg004091l.g190.t1 Hetu31g00723 723
31 31616729 31618533 + >Htub.h2tg002051l.g107.t1 Hetu31g00727 727
32 34263472 34268570 + >Htub.h1tg002251l.g105.t1 Hetu32g00781 781
32 34433584 34435441 + >Htub.h1tg002251l.g101.t1 Hetu32g00785 785
33 34471676 34476728 + >Htub.h1tg001856l.g166.t1 Hetu33g00845 845
33 34577633 34579384 + >Htub.h1tg001856l.g162.t1 Hetu33g00849 849
7 139648405 139653574 + CAI9295121.1 Laca7g02928 2928
7 139657113 139659855 + CAI9295122.1 Laca7g02929 2929
7 139670089 139671684 - CAI9295123.1 Laca7g02930 2930
7 139723749 139725812 + CAI9295125.1 Laca7g02932 2932
7 139958068 139958733 + CAI9295130.1 Laca7g02937 2937
1 3208472 3214149 + LmiAMIRv0_Chr01g0003621 Lomi1g00362 362
1 3218289 3220936 + LmiAMIRv0_Chr01g0003631 Lomi1g00363 363
1 3222879 3224226 - LmiAMIRv0_Chr01g0003641 Lomi1g00364 364
1 3243145 3248456 - LmiAMIRv0_Chr01g0003651 Lomi1g00365 365
1 3260642 3261321 + LmiAMIRv0_Chr01g0003661 Lomi1g00366 366
1 3261655 3265101 - LmiAMIRv0_Chr01g0003671 Lomi1g00367 367
2 48376125 48376781 + LmiAMIRv0_Chr02g0088251 Lomi2g04292 4292
2 48377123 48377817 - LmiAMIRv0_Chr02g0088261 Lomi2g04293 4293
2 48385830 48391400 + LmiAMIRv0_Chr02g0088271 Lomi2g04294 4294
2 48392820 48394643 + LmiAMIRv0_Chr02g0088281 Lomi2g04295 4295
2 48403244 48404855 + LmiAMIRv0_Chr02g0088301 Lomi2g04297 4297
2 48406269 48408734 - LmiAMIRv0_Chr02g0088311 Lomi2g04298 4298
7 190322585 190327423 + >KAJ0198239.1 Lssa7g03595 3595
7 190329780 190332443 + >KAJ0194948.1 Lssa7g03596 3596
7 190340433 190341941 - >KAJ0197478.1 Lssa7g03597 3597
7 190395202 190397346 - >KAJ0195068.1 Lssa7g03599 3599
7 190539243 190543335 - >KAJ0195676.1 Lssa7g03601 3601
7 191029717 191030398 + >KAJ0197397.1 Lssa7g03608 3608
7 191032753 191035959 - >KAJ0195933.1 Lssa7g03609 3609
17 18386837 18393822 + KAD3066841.1 Mimi17g00519 519
17 18761355 18766402 + KAD3066849.1 Mimi17g00527 527
17 19000108 19004849 - KAD3066854.1 Mimi17g00532 532
4 11410991 11417638 + PdyAMIRv0_Chr04g0154301 Pdy4g00623 623
4 11421161 11423170 + PdyAMIRv0_Chr04g0154311 Pdy4g00624 624
4 11462781 11464044 + PdyAMIRv0_Chr04g0154331 Pdy4g00626 626
4 11500009 11505105 - PdyAMIRv0_Chr04g0154351 Pdy4g00628 628
4 11539174 11539905 + PdyAMIRv0_Chr04g0154371 Pdy4g00630 630
4 11539552 11543154 - PdyAMIRv0_Chr04g0154381 Pdy4g00631 631
1 151562244 151564999 + PluAMIRv0_Chr01g0209691 Pslu1g21062 21062
1 151565327 151566000 - PluAMIRv0_Chr01g0209701 Pslu1g21063 21063
1 151575053 151575742 + PluAMIRv0_Chr01g0209741 Pslu1g21067 21067
1 151587896 151593734 + PluAMIRv0_Chr01g0209751 Pslu1g21068 21068
1 151594765 151596617 + PluAMIRv0_Chr01g0209761 Pslu1g21069 21069
1 151612650 151613996 + PluAMIRv0_Chr01g0209781 Pslu1g21071 21071
1 151615777 151618247 - PluAMIRv0_Chr01g0209791 Pslu1g21072 21072
12 5615180 5618888 + SinAMIRv0_Chr12g0358691 Sain12g00304 304
12 5619190 5620070 - SinAMIRv0_Chr12g0358701 Sain12g00305 305
12 5641892 5642635 + SinAMIRv0_Chr12g0358711 Sain12g00306 306
12 5684226 5688593 + SinAMIRv0_Chr12g0358721 Sain12g00307 307
12 5721608 5724434 + SinAMIRv0_Chr12g0358741 Sain12g00309 309
12 5737951 5741601 + SinAMIRv0_Chr12g0358761 Sain12g00311 311
12 5744148 5745467 - SinAMIRv0_Chr12g0358771 Sain12g00312 312
12 5756118 5761970 - SinAMIRv0_Chr12g0358781 Sain12g00313 313
7 5876039 5881407 + KAI3809935.1 Smso7g00355 355
7 5947077 5948482 + KAI3809939.1 Smso7g00359 359
7 5970816 5974060 - KAI3809943.1 Smso7g00363 363
29 6002567 6008175 + KAI3675396.1 Smso29g00402 402
29 6080985 6082977 + KAI3675400.1 Smso29g00406 406
29 6134038 6136992 - KAI3675404.1 Smso29g00410 410
5 25054036 25057490 + transfrag11019.t01 Soca5g02343 2343
5 28370062 28373899 + augustus48072.t01 Soca5g02601 2601
5 28414887 28417792 + augustus48066.t02 Soca5g02607 2607
5 28431392 28432913 - transfrag32186.t01 Soca5g02609 2609
5 28451371 28453366 - transfrag32184.t01 Soca5g02611 2611
5 28457408 28461569 - transfrag32182.t01 Soca5g02612 2612
5 28483061 28483759 - genewise41278.t01 Soca5g02613 2613
5 28507062 28507740 + genewise41277.t01 Soca5g02614 2614
5 46943984 46945032 - augustus06746.t01 Soca5g03893 3893
6 13917148 13922785 + Streb.6G005030.1 Stre6g00503 503
6 14043474 14044775 + Streb.6G005070.1 Stre6g00507 507
6 14111408 14114782 - Streb.6G005110.1 Stre6g00511 511
1 49560068 49563000 + >KAK1439585.1 Taer1g05405 5405
1 49584519 49585954 - >KAK1439589.1 Taer1g05409 5409
1 49609004 49614420 - >KAK1439592.1 Taer1g05412 5412
4 49293264 49293938 - TbA04G034880.1 Tamo4g02644 2644
4 50301732 50304826 + TbA04G033820.1 Tamo4g02678 2678
4 50322959 50324691 + TbA04G033810.1 Tamo4g02679 2679
4 50330431 50336921 - TbA04G033790.1 Tamo4g02681 2681
4 50337623 50343110 - TbA04G033780.1 Tamo4g02682 2682
       
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