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AGRP

Asteraceae Genomic Research Platform

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Example:

Hierarchical alignments with the Arctium lappa genome as reference

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Asteraceae genomes. We used Arctium lappa as a reference, and by comparing homologous gene locus maps and Ks values between Arctium lappa and other Asteraceae, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We constructed a 74×31,441 macro-matrices.


Select Armi_1 Sain_1 Ceso_1 Cati_1 Ccar_1 Cien_1 Cich_1 Lssa_1 Laca_1 Tako_1 Tamo_1 Pslu_1 Lomi_1 Lomi_2 Enbr_1 Ecan_1 Soca_1 Glco_1 Artr_1 Aary_1 Aary_2 Aann_1 Chma_1 Chmo_1 Chmo_2 Chmo_3 Chla_1 Chna_1 Cind_1 Pdy_1 Cobi_1 Hean_1 Bial_1 Bial_2 Dapi_1 Dapi_2 Hetu_1 Hetu_2 Hetu_3 Amtr_1 Smso_1 Smso_2 Taer_1 Fro_1 Fso_1 Ftr_1 Fra_1 Fli_1 Stre_1 Mimi_1 Cobi_2 Hean_2 Bial_3 Bial_4 Dapi_3 Dapi_4 Hetu_4 Hetu_5 Hetu_6 Amtr_2 Smso_3 Smso_4 Taer_2 Fro_2 Fso_2 Ftr_2 Fra_2 Fli_2 Stre_2 Mimi_2
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00522 Sain12g00464 Ceso2g01378 Cati3g00572 Ccar2g01984 . . . . . . Pslu1g21416 Lomi1g00281 Lomi2g04376 . Ecan3g02127 Soca5g02532 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00524 Sain12g00465 Ceso2g01379 Cati3g00576 Ccar2g01983 Cien5g03179 Cich4g04452 Lssa7g03422 . Tako4g04007 . Pslu1g21417 Lomi1g00280 Lomi2g04377 Enbr6g01737 Ecan3g02126 Soca5g02534 . . Aary5g02822 Aary13g03295 Aann4g01168 . Chmo13g00746 Chmo14g00737 Chmo15g00619 . Chna2g00602 Cind3g05116 Pdy4g00485 . . . . . . . . . . . . . . . . . . . . Cobi4g03137 Hean11g00734 Bial4g03419 Bial16g02815 Dapi7g00282 Dapi23g00308 Hetu32g00607 Hetu31g00556 Hetu33g00704 . Smso7g00077 Smso29g00083 Taer1g05528 Fro12g02398 Fso2g00233 Ftr4g03696 Fra11g02537 Fli1g00263 Stre6g00378 Mimi17g00390
Armi1g00525 Sain12g00466 . Cati3g00578 Ccar2g01982 . . . . . . Pslu1g21418 Lomi1g00279 Lomi2g04378 Enbr6g01736 Ecan3g02125 Soca5g02535 . . . . . . Chmo13g00745 Chmo14g00736 Chmo15g00618 . Chna2g00601 Cind3g05117 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00526 Sain12g00467 Ceso2g01380 Cati3g00579 Ccar2g01981 . Cich4g04450 Lssa7g03421 . Tako4g04012 Tamo4g02924 . Lomi1g00278 Lomi2g04379 Enbr6g01735 Ecan3g02124 Soca5g02537 . . Aary5g02824 Aary13g03297 Aann4g01171 . Chmo13g00742 Chmo14g00735 Chmo15g00617 . Chna2g00600 Cind3g05120 Pdy4g00484 . . . . . . . . . . . . . . . . . . . . Cobi4g03138 Hean11g00730 Bial4g03420 Bial16g02816 Dapi7g00281 Dapi23g00307 Hetu32g00605 Hetu31g00551 Hetu33g00702 . Smso7g00078 Smso29g00084 Taer1g05529 Fro12g02400 . . Fra11g02539 Fli1g00262 Stre6g00377 Mimi17g00389
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00527 Sain12g00469 Ceso2g01382 Cati3g00580 Ccar2g01980 . Cich4g04448 Lssa7g03419 Laca7g02768 Tako4g04013 Tamo4g02925 Pslu1g21421 Lomi1g00277 Lomi2g04381 Enbr6g01734 Ecan3g02123 Soca5g02745 . . Aary5g02826 Aary13g03299 Aann4g01172 . Chmo13g00740 Chmo14g00731 Chmo15g00615 . Chna2g00598 Cind3g03782 Pdy4g00483 . Hean15g03888 Bial24g02237 Bial12g02380 . . Hetu17g02561 Hetu16g02662 . Amtr02g04052 . . . . . . . . Stre9g01617 . Cobi4g03139 Hean11g00728 Bial4g03421 Bial16g02817 Dapi7g00280 Dapi23g00306 Hetu32g00604 Hetu31g00550 Hetu33g00701 . Smso7g00079 Smso29g00086 Taer1g05530 Fro12g02401 . . Fra11g02540 Fli1g00261 . .
Armi1g00528 Sain12g00473 . Cati3g00581 Ccar2g01979 Cien5g03177 Cich4g04447 Lssa7g03418 Laca7g02767 Tako4g04014 Tamo4g02926 Pslu1g21428 Lomi1g00276 . . Ecan3g02121 Soca5g02539 Glco3g01075 . . . Aann4g01175 Chma7g08164 Chmo13g00738 Chmo14g00728 Chmo15g00613 . Chna2g00596 Cind3g05125 Pdy4g00482 . . . . . . . . . . . . . . . . . . . . Cobi4g03140 Hean11g00727 . . . . . . . . . . Taer1g05531 Fro12g02402 . Ftr4g03697 Fra11g02541 Fli1g00260 Stre6g00376 Mimi17g00387
. Sain12g00475 Ceso2g01383 Cati3g00583 Ccar2g01978 . . Lssa7g03414 Laca7g02765 . Tamo4g02929 Pslu1g21429 Lomi1g00274 Lomi2g04382 Enbr6g01732 Ecan3g02120 Soca5g02540 . . Aary5g02835 . Aann4g01177 . Chmo13g00731 Chmo14g00721 Chmo15g00604 . Chna2g00575 Cind3g03790 . . . . . . . . . . . . . . . . . . . . . Cobi4g03141 Hean11g00726 Bial4g03423 Bial16g02819 Dapi7g00278 Dapi23g00304 Hetu32g00602 Hetu31g00546 Hetu33g00693 . Smso7g00081 Smso29g00088 . . . . . . Stre6g00375 Mimi17g00385
   
Gene_GFF
Select Chromosome Start End Strand Old_gene Gene Num
4 62368419 62371597 + chr4g0777511 Aann4g01168 1168
4 62382381 62387413 + chr4g0777541 Aann4g01171 1171
4 62391903 62402410 + chr4g0777551 Aann4g01172 1172
4 62794722 62796178 - chr4g0777871 Aann4g01175 1175
4 63002724 63007764 + chr4g0778051 Aann4g01177 1177
5 170628895 170633250 + Aargg5g28220.1 Aary5g02822 2822
5 170646964 170650565 + Aargg5g28240.1 Aary5g02824 2824
5 170756343 170766859 + Aargg5g28260.1 Aary5g02826 2826
5 171943690 171948354 + Aargg5g28350.1 Aary5g02835 2835
13 196933966 196938099 + Aargg13g32950.1 Aary13g03295 3295
13 197004283 197007884 + Aargg13g32970.1 Aary13g03297 3297
13 197352400 197362326 + Aargg13g32990.1 Aary13g03299 3299
2 80807589 80813050 - AtrifAMIRv0_Chr02g0136481 Amtr02g04052 4052
1 11026321 11030289 - AmiAMIRv0_Chr01g0005221 Armi1g00522 522
1 11090731 11095748 + AmiAMIRv0_Chr01g0005241 Armi1g00524 524
1 11096610 11099823 - AmiAMIRv0_Chr01g0005251 Armi1g00525 525
1 11105401 11115215 + AmiAMIRv0_Chr01g0005261 Armi1g00526 526
1 11196505 11211339 + AmiAMIRv0_Chr01g0005271 Armi1g00527 527
1 11233888 11235303 - AmiAMIRv0_Chr01g0005281 Armi1g00528 528
4 78020428 78024592 + g43258.t1 Bial4g03419 3419
4 78026690 78032666 + g43259.t1 Bial4g03420 3420
4 78034282 78040197 + g43260.t1 Bial4g03421 3421
4 78050995 78054906 + g43262.t1 Bial4g03423 3423
12 54151790 54156178 + g35579.t1 Bial12g02380 2380
16 72300120 72304869 + g127385.t1 Bial16g02815 2815
16 72308362 72312860 + g127384.t1 Bial16g02816 2816
16 72314419 72320101 + g127383.t1 Bial16g02817 2817
16 72334378 72335554 + g127381.t1 Bial16g02819 2819
24 53039398 53043794 + g67903.t1 Bial24g02237 2237
3 5860519 5882398 - CtAH03T0040100.1 Cati3g00572 572
3 5940828 5947009 + CtAH03T0040400.3 Cati3g00576 576
3 5946584 5956834 - CtAH03T0040500.1 Cati3g00578 578
3 5965136 5973194 + CtAH03T0040600.1 Cati3g00579 579
3 5993269 6008607 + CtAH03T0040700.1 Cati3g00580 580
3 6021907 6025335 - CtAH03T0040800.1 Cati3g00581 581
3 6047796 6059757 + CtAH03T0041000.1 Cati3g00583 583
2 66530503 66538720 - gnl|WGS:LEKV|Ccrd_011025.mRNA.1_mrna Ccar2g01978 1978
2 66548324 66549745 + gnl|WGS:LEKV|Ccrd_011026.mRNA.1_mrna Ccar2g01979 1979
2 66553676 66567482 - gnl|WGS:LEKV|Ccrd_011027.mRNA.1_mrna Ccar2g01980 1980
2 66568464 66575396 - gnl|WGS:LEKV|Ccrd_011028.mRNA.1_mrna Ccar2g01981 1981
2 66599970 66603527 + gnl|WGS:LEKV|Ccrd_011029.mRNA.1_mrna Ccar2g01982 1982
2 66604104 66609294 - gnl|WGS:LEKV|Ccrd_011030.mRNA.1_mrna Ccar2g01983 1983
2 66605386 66617978 + gnl|WGS:LEKV|Ccrd_011031.mRNA.1_mrna Ccar2g01984 1984
2 28178684 28182291 - >KAJ9560761.1 Ceso2g01378 1378
2 28194273 28199957 + >KAJ9560689.1 Ceso2g01379 1379
2 28207059 28212634 + >KAJ9560687.1 Ceso2g01380 1380
2 28225277 28229755 + >KAJ9560691.1 Ceso2g01382 1382
2 28263588 28269422 + >KAJ9560690.1 Ceso2g01383 1383
7 279234207 279237692 + CmaNakai_Chr07g0704661 Chma7g08164 8164
13 34819425 34823672 - evm.model.scaffold_597.86 Chmo13g00731 731
13 34978794 34980420 + evm.model.scaffold_597.98 Chmo13g00738 738
13 35141223 35151205 - evm.model.scaffold_597.109 Chmo13g00740 740
13 35171945 35196425 - evm.model.scaffold_597.111 Chmo13g00742 742
13 35362122 35368038 + evm.model.scaffold_597.116 Chmo13g00745 745
13 35368257 35370576 - evm.model.scaffold_597.117 Chmo13g00746 746
14 32916922 32921151 - evm.model.scaffold_489.42 Chmo14g00721 721
14 33223057 33224448 + evm.model.scaffold_489.59 Chmo14g00728 728
14 33492309 33501443 - evm.model.scaffold_489.71 Chmo14g00731 731
14 33577444 33579750 - evm.model.scaffold_489.77 Chmo14g00735 735
14 33585270 33587828 + evm.model.scaffold_489.78 Chmo14g00736 736
14 33588001 33591906 - evm.model.scaffold_489.79 Chmo14g00737 737
15 32005621 32009476 - evm.model.scaffold_1740.113 Chmo15g00604 604
15 32372162 32373915 + evm.model.scaffold_1740.137 Chmo15g00613 613
15 32523938 32539248 - evm.model.scaffold_1740.143 Chmo15g00615 615
15 32580762 32585420 - evm.model.scaffold_1740.146_evm.model.scaffold_1740.147 Chmo15g00617 617
15 32609493 32613003 + evm.model.scaffold_1740.148 Chmo15g00618 618
15 32613309 32617475 - evm.model.scaffold_1740.149 Chmo15g00619 619
2 39825805 39838651 - Cn0172480 Chna2g00575 575
2 40784423 40785814 + Cn0067830 Chna2g00596 596
2 40909629 40920445 - Cn0067790 Chna2g00598 598
2 40965046 40969794 - Cn0067770 Chna2g00600 600
2 40979221 40983092 + Cn0067760 Chna2g00601 601
2 40983866 40987373 - Cn0067750 Chna2g00602 602
4 130031056 130032480 + KAI3753582.1 Cich4g04447 4447
4 130056278 130061732 - KAI3753583.1 Cich4g04448 4448
4 130063332 130066058 - KAI3753585.1 Cich4g04450 4450
4 130085451 130089025 - KAI3753587.1 Cich4g04452 4452
5 76736030 76737463 + KAI3509697.1 Cien5g03177 3177
5 76774158 76777790 - KAI3509699.1 Cien5g03179 3179
3 336436617 336445666 + D.indicum_Contig415_G00009.t1 Cind3g03782 3782
3 338155215 338158800 + D.indicum_Contig415_G00017.t1 Cind3g03790 3790
3 335238940 335243028 + D.indicum_Contig707_G00002.t1 Cind3g05116 5116
3 335243330 335245756 - D.indicum_Contig707_G00003.t1 Cind3g05117 5117
3 335470104 335474266 - D.indicum_Contig707_G00006.t1 Cind3g05120 5120
3 335793123 335794511 - D.indicum_Contig707_G00011.t1 Cind3g05125 5125
4 80923473 80929258 + h2tg000009l_1.g42142.t1 Cobi4g03137 3137
4 80933140 80939489 + h2tg000009l_1.g42141.t1 Cobi4g03138 3138
4 80941115 80947624 + h2tg000009l_1.g42140.t1 Cobi4g03139 3139
4 80951777 80953111 - h2tg000009l_1.g42139.t1 Cobi4g03140 3140
4 80969740 80974680 + h2tg000009l_1.g42138.t1 Cobi4g03141 3141
7 5561300 5565109 - h1tg000136l.g124386.t1 Dapi7g00278 278
7 5592189 5605259 - h1tg000030l.g76870.t1 Dapi7g00280 280
7 5609205 5614120 - h1tg000030l.g76871.t1 Dapi7g00281 281
7 5616101 5621135 - h1tg000030l.g76872.t1 Dapi7g00282 282
23 6175484 6179944 - h2tg000284l.g80741.t1 Dapi23g00304 304
23 6230000 6235716 - h2tg000284l.g80739.t1 Dapi23g00306 306
23 6239699 6244714 - h2tg000284l.g80738.t1 Dapi23g00307 307
23 6246719 6251725 - h2tg000284l.g80737.t1 Dapi23g00308 308
3 31999779 32003256 - XM_043766840.1 Ecan3g02120 2120
3 32018936 32020528 + XM_043766578.1 Ecan3g02121 2121
3 32022562 32029827 - XM_043766704.1 Ecan3g02123 2123
3 32034206 32039027 - XM_043763462.1 Ecan3g02124 2124
3 32041960 32045541 + XM_043763461.1 Ecan3g02125 2125
3 32045565 32051202 - XM_043763460.1 Ecan3g02126 2126
3 32051394 32056203 + XM_043764970.1 Ecan3g02127 2127
6 61159886 61163004 - evm.model.ctg2652.2 Enbr6g01732 1732
6 61232811 61240010 - evm.model.ctg5390.6 Enbr6g01734 1734
6 61244364 61248830 - evm.model.ctg5390.5 Enbr6g01735 1735
6 61252395 61255189 + evm.model.ctg5390.4 Enbr6g01736 1736
6 61255980 61259937 - evm.model.ctg5390.3 Enbr6g01737 1737
1 5212780 5214144 + FliAMIRv0_Chr01g0002551 Fli1g00260 260
1 5216989 5227246 - FliAMIRv0_Chr01g0002561 Fli1g00261 261
1 5232719 5237247 - FliAMIRv0_Chr01g0002571 Fli1g00262 262
1 5249691 5254613 - FliAMIRv0_Chr01g0002581 Fli1g00263 263
11 79039321 79044222 + FraAMIRv0_Chr11g0225591 Fra11g02537 2537
11 79053054 79057502 + FraAMIRv0_Chr11g0225611 Fra11g02539 2539
11 79060023 79064274 + FraAMIRv0_Chr11g0225621 Fra11g02540 2540
11 79066600 79067967 - FraAMIRv0_Chr11g0225631 Fra11g02541 2541
12 31830745 31834787 + FroAMIRv0_Chr12g0219461 Fro12g02398 2398
12 31841681 31846215 + FroAMIRv0_Chr12g0219481 Fro12g02400 2400
12 31848146 31853431 + FroAMIRv0_Chr12g0219491 Fro12g02401 2401
12 31855817 31857178 - FroAMIRv0_Chr12g0219501 Fro12g02402 2402
2 3187653 3192614 - FsoAMIRv0_Chr02g0030521 Fso2g00233 233
4 120862502 120869818 + FtrAMIRv0_Chr04g0131301 Ftr4g03696 3696
4 120890630 120891988 - FtrAMIRv0_Chr04g0131311 Ftr4g03697 3697
3 63982295 63983689 - GcoAMIRv0_Chr03g0167041 Glco3g01075 1075
11 15532312 15538997 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0474371 Hean11g00726 726
11 15556964 15558319 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0474381 Hean11g00727 727
11 15561477 15573526 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0474391 Hean11g00728 728
11 15578253 15584895 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0474411 Hean11g00730 730
11 15742807 15751579 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0474451 Hean11g00734 734
15 147632045 147638775 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0715941 Hean15g03888 3888
16 143805292 143809500 + >Htub.h1tg002434l.g118.t1 Hetu16g02662 2662
17 135965507 135969720 + >Htub.h1tg000886l.g413.t1 Hetu17g02561 2561
31 20109017 20110224 - >Htub.h1tg001429l.g317.t1 Hetu31g00546 546
31 20300134 20309111 - >Htub.h1tg001429l.g313.t1 Hetu31g00550 550
31 20313376 20320161 - >Htub.h1tg001429l.g312.t1 Hetu31g00551 551
31 20439357 20441347 - >Htub.h1tg001429l.g307.t1 Hetu31g00556 556
32 24331751 24338721 - >Htub.h1tg001952l.g163.t1 Hetu32g00602 602
32 24411800 24420777 - >Htub.h1tg001952l.g161.t1 Hetu32g00604 604
32 24425042 24431221 - >Htub.h1tg001952l.g160.t1 Hetu32g00605 605
32 24545643 24552058 - >Htub.h1tg001952l.g158.t1 Hetu32g00607 607
33 24269824 24275756 - >Htub.h1tg000986l.g380.t1 Hetu33g00693 693
33 24810621 24819124 - >Htub.h1tg000986l.g372.t1 Hetu33g00701 701
33 24830301 24834445 - >Htub.h1tg000986l.g371.t1 Hetu33g00702 702
33 25173481 25179401 - >Htub.h1tg000986l.g369.t1 Hetu33g00704 704
7 132139800 132143601 - CAI9294953.1 Laca7g02765 2765
7 132212466 132213650 + CAI9294955.1 Laca7g02767 2767
7 132218618 132221519 - CAI9294956.1 Laca7g02768 2768
1 2303853 2308194 - LmiAMIRv0_Chr01g0002741 Lomi1g00274 274
1 2324583 2326028 + LmiAMIRv0_Chr01g0002761 Lomi1g00276 276
1 2328740 2334807 - LmiAMIRv0_Chr01g0002771 Lomi1g00277 277
1 2337586 2342118 - LmiAMIRv0_Chr01g0002781 Lomi1g00278 278
1 2345257 2348068 + LmiAMIRv0_Chr01g0002791 Lomi1g00279 279
1 2348371 2353325 - LmiAMIRv0_Chr01g0002801 Lomi1g00280 280
1 2359129 2363068 + LmiAMIRv0_Chr01g0002811 Lomi1g00281 281
2 49150190 49153531 - LmiAMIRv0_Chr02g0089091 Lomi2g04376 4376
2 49158177 49163123 + LmiAMIRv0_Chr02g0089101 Lomi2g04377 4377
2 49163415 49165940 - LmiAMIRv0_Chr02g0089111 Lomi2g04378 4378
2 49170947 49175124 + LmiAMIRv0_Chr02g0089121 Lomi2g04379 4379
2 49185742 49193025 + LmiAMIRv0_Chr02g0089141 Lomi2g04381 4381
2 49195575 49199202 + LmiAMIRv0_Chr02g0089151 Lomi2g04382 4382
7 179339655 179342420 - >KAJ0195177.1 Lssa7g03414 3414
7 179423027 179424454 + >KAJ0197251.1 Lssa7g03418 3418
7 179427631 179432161 - >KAJ0194728.1 Lssa7g03419 3419
7 179499236 179501741 - >KAJ0197554.1 Lssa7g03421 3421
7 179505268 179509550 - >KAJ0195024.1 Lssa7g03422 3422
17 12482014 12489546 - KAD3066707.1 Mimi17g00385 385
17 12550367 12551758 + KAD3066709.1 Mimi17g00387 387
17 12580593 12585935 - KAD3066711.1 Mimi17g00389 389
17 12590447 12596422 - KAD3066712.1 Mimi17g00390 390
4 8959369 8960823 + PdyAMIRv0_Chr04g0152901 Pdy4g00482 482
4 8978943 8985172 - PdyAMIRv0_Chr04g0152911 Pdy4g00483 483
4 8987190 8992496 - PdyAMIRv0_Chr04g0152921 Pdy4g00484 484
4 8995774 9000055 - PdyAMIRv0_Chr04g0152931 Pdy4g00485 485
1 153867252 153871065 - PluAMIRv0_Chr01g0213221 Pslu1g21416 21416
1 153873751 153878642 + PluAMIRv0_Chr01g0213231 Pslu1g21417 21417
1 153878940 153882251 - PluAMIRv0_Chr01g0213241 Pslu1g21418 21418
1 153904484 153911286 + PluAMIRv0_Chr01g0213271 Pslu1g21421 21421
1 153953574 153955004 - PluAMIRv0_Chr01g0213341 Pslu1g21428 21428
1 153963750 153968692 + PluAMIRv0_Chr01g0213351 Pslu1g21429 21429
12 10217227 10219984 - SinAMIRv0_Chr12g0360281 Sain12g00464 464
12 10279606 10283721 + SinAMIRv0_Chr12g0360291 Sain12g00465 465
12 10284484 10286601 - SinAMIRv0_Chr12g0360301 Sain12g00466 466
12 10289926 10293158 + SinAMIRv0_Chr12g0360311 Sain12g00467 467
12 10323354 10334515 + SinAMIRv0_Chr12g0360331 Sain12g00469 469
12 10347919 10349334 - SinAMIRv0_Chr12g0360371 Sain12g00473 473
12 10389811 10393200 + SinAMIRv0_Chr12g0360391 Sain12g00475 475
7 1625553 1630681 + KAI3809657.1 Smso7g00077 77
7 1632654 1637611 + KAI3809658.1 Smso7g00078 78
7 1643433 1653115 + KAI3809659.1 Smso7g00079 79
7 1685084 1690181 + KAI3809661.1 Smso7g00081 81
29 1722211 1727336 + KAI3675077.1 Smso29g00083 83
29 1730362 1740585 + KAI3675078.1 Smso29g00084 84
29 1746261 1753052 + KAI3675080.1 Smso29g00086 86
29 1777780 1782850 + KAI3675082.1 Smso29g00088 88
5 27601416 27606172 - transfrag11158.t01 Soca5g02532 2532
5 27606320 27612002 + transfrag11159.t01 Soca5g02534 2534
5 27612003 27616564 - transfrag11160.t01 Soca5g02535 2535
5 27629088 27634343 + transfrag11162.t01 Soca5g02537 2537
5 27645961 27647385 - augustus16795.t01 Soca5g02539 2539
5 27673643 27677524 + augustus16796.t01 Soca5g02540 2540
5 30429233 30437349 + transfrag32063.t01 Soca5g02745 2745
6 9981918 9987343 - Streb.6G003750.1 Stre6g00375 375
6 10034697 10036280 + Streb.6G003760.1 Stre6g00376 376
6 10040832 10047653 - Streb.6G003770.1 Stre6g00377 377
6 10050661 10064604 - Streb.6G003780.1 Stre6g00378 378
9 28541818 28546426 + Streb.9G016170.1 Stre9g01617 1617
1 50547581 50551586 + >KAK1439708.1 Taer1g05528 5528
1 50553635 50557667 + >KAK1439709.1 Taer1g05529 5529
1 50559712 50564077 + >KAK1439710.1 Taer1g05530 5530
1 50569810 50571198 - >KAK1439711.1 Taer1g05531 5531
4 90310492 90314975 + TkA04G358430.1 Tako4g04007 4007
4 90316158 90318513 + TkA04G358440.1 Tako4g04012 4012
4 90321123 90325779 + TkA04G358450.1 Tako4g04013 4013
4 90327702 90329009 - TkA04G358460.1 Tako4g04014 4014
4 55874435 55877034 + TbA04G027360.1 Tamo4g02924 2924
4 55877888 55883216 + TbA04G027350.1 Tamo4g02925 2925
4 55885565 55886848 - TbA04G027340.1 Tamo4g02926 2926
4 55934403 55937693 + TbA04G027280.1 Tamo4g02929 2929
       
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