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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Hierarchical alignments with the Arctium lappa genome as reference

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Asteraceae genomes. We used Arctium lappa as a reference, and by comparing homologous gene locus maps and Ks values between Arctium lappa and other Asteraceae, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We constructed a 74×31,441 macro-matrices.


Select Armi_1 Sain_1 Ceso_1 Cati_1 Ccar_1 Cien_1 Cich_1 Lssa_1 Laca_1 Tako_1 Tamo_1 Pslu_1 Lomi_1 Lomi_2 Enbr_1 Ecan_1 Soca_1 Glco_1 Artr_1 Aary_1 Aary_2 Aann_1 Chma_1 Chmo_1 Chmo_2 Chmo_3 Chla_1 Chna_1 Cind_1 Pdy_1 Cobi_1 Hean_1 Bial_1 Bial_2 Dapi_1 Dapi_2 Hetu_1 Hetu_2 Hetu_3 Amtr_1 Smso_1 Smso_2 Taer_1 Fro_1 Fso_1 Ftr_1 Fra_1 Fli_1 Stre_1 Mimi_1 Cobi_2 Hean_2 Bial_3 Bial_4 Dapi_3 Dapi_4 Hetu_4 Hetu_5 Hetu_6 Amtr_2 Smso_3 Smso_4 Taer_2 Fro_2 Fso_2 Ftr_2 Fra_2 Fli_2 Stre_2 Mimi_2
Armi1g00529 Sain12g00476 Ceso2g01384 Cati3g00584 Ccar2g01977 Cien5g03175 Cich4g04445 Lssa7g03413 Laca7g02764 . Tamo4g02930 Pslu1g21430 Lomi1g00273 Lomi2g04383 Enbr6g01731 Ecan3g02119 Soca5g02541 . . Aary5g02836 . Aann4g01178 . Chmo13g00730 Chmo14g00720 Chmo15g00603 . Chna2g00574 Cind3g03791 Pdy4g00481 . Hean15g03887 Bial24g02238 Bial12g02381 . . Hetu17g02563 Hetu16g02663 . Amtr02g04051 . Smso13g00176 . . . . . . Stre9g01619 Mimi9g01450 Cobi4g03142 Hean11g00725 Bial4g03424 Bial16g02820 Dapi7g00277 Dapi23g00303 Hetu32g00600 Hetu31g00541 Hetu33g00692 . Smso7g00082 Smso29g00089 Taer1g05534 Fro12g02403 . Ftr4g03699 Fra11g02542 Fli1g00259 Stre6g00374 Mimi17g00384
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00532 Sain12g00477 Ceso2g01385 Cati3g00586 Ccar2g01976 Cien5g03173 Cich4g04443 Lssa7g03412 Laca7g02763 . . Pslu1g21431 Lomi1g00272 Lomi2g04384 Enbr6g01730 Ecan3g02118 . Glco3g01036 . Aary5g02837 . Aann4g01179 . Chmo13g00729 Chmo14g00718 Chmo15g00602 . Chna2g00573 Cind3g03792 Pdy4g00480 . . . . . . . . . . . . . . . . . . . . Cobi4g03145 Hean11g00722 Bial4g03428 Bial16g02823 Dapi7g00275 Dapi23g00301 Hetu32g00599 Hetu31g00537 Hetu33g00691 . Smso7g00083 Smso29g00090 . . . . . . Stre6g00373 Mimi17g00383
Armi1g00533 Sain12g00478 Ceso2g01386 Cati3g00588 Ccar2g01975 Cien5g03172 Cich4g04442 Lssa7g03411 Laca7g02762 . Tamo4g02937 Pslu1g21432 Lomi1g00271 Lomi2g04385 Enbr6g01729 Ecan3g02116 Soca5g02543 Glco3g01033 . . . . . . Chmo14g00715 Chmo15g00599 . Chna2g00566 . Pdy4g00479 . Hean15g03883 Bial24g02241 Bial12g02384 . . Hetu17g02567 Hetu16g02665 . Amtr02g04049 . Smso13g00173 . . . . . . Stre9g01621 . Cobi4g03146 Hean11g00720 Bial4g03429 . Dapi7g00273 Dapi23g00299 Hetu32g00598 Hetu31g00536 Hetu33g00690 . Smso7g00084 Smso29g00091 . . . . . . Stre6g00372 .
Armi1g00534 Sain12g00480 . Cati3g00592 Ccar2g01974 Cien5g03171 Cich4g04441 Lssa7g03410 Laca7g02761 . . Pslu1g21433 Lomi1g00270 Lomi2g04386 . Ecan3g02115 Soca5g02752 Glco3g01031 . . . . Chma7g08198 . Chmo14g00714 Chmo15g00598 . Chna2g00562 . . . . . . . . . . . . . . . . . . . . . . Cobi4g03147 Hean11g00715 . Bial16g02824 Dapi7g00272 Dapi23g00298 . Hetu31g00535 Hetu33g00688 . Smso7g00085 Smso29g00092 . . . . . . . Mimi17g00382
Armi1g00535 Sain12g00481 . . Ccar2g01973 . Cich4g04440 Lssa7g03409 Laca7g02760 . Tamo4g02941 Pslu1g21434 Lomi1g00269 . Enbr6g01728 Ecan3g02114 Soca5g02544 . . Aary5g02840 Aary13g03302 Aann4g01183 . . Chmo14g00713 Chmo15g00597 . Chna2g00561 . Pdy4g00475 . . . . . . . . . . . . . . . . . . . . Cobi4g03148 Hean11g00714 Bial4g03431 Bial16g02825 Dapi7g00271 Dapi23g00297 Hetu32g00597 Hetu31g00534 Hetu33g00687 . Smso7g00086 Smso29g00093 . . . . . . Stre6g00371 Mimi17g00381
Armi1g00536 Sain12g00483 Ceso2g01388 Cati3g00594 Ccar2g01972 . Cich4g04435 Lssa7g03403 . . Tamo4g02946 Pslu1g21436 Lomi1g00268 Lomi2g04387 Enbr6g01726 Ecan3g02113 Soca5g02545 Glco3g01021 . Aary5g02842 Aary13g03303 Aann4g01185 . Chmo13g00724 Chmo14g00710 Chmo15g00593 . Chna2g00556 Cind3g02834 Pdy4g00473 Cobi4g00968 Hean4g04275 Bial4g01339 Bial16g01168 Dapi7g02280 Dapi23g00294 Hetu11g00285 Hetu12g00278 Hetu10g00302 . Smso10g00985 Smso20g01143 Taer6g01118 Fro12g00900 Fso2g02459 Ftr4g00889 Fra11g00896 Fli1g02280 Stre6g02066 Mimi17g02103 Cobi4g03150 Hean11g00707 . . . . . . . . . . . . . . . . Stre6g00369 Mimi17g00380
Armi1g00537 Sain12g00484 . Cati3g00595 Ccar2g01971 Cien5g03169 Cich4g04433 Lssa7g03402 . . . Pslu1g21440 Lomi1g00267 . . Ecan3g02112 Soca5g02546 Glco3g01018 . Aary5g02844 . Aann4g01188 . Chmo13g00722 Chmo14g00709 Chmo15g00591 . Chna2g00555 Cind3g02833 Pdy4g00471 . Hean15g03879 Bial24g02243 Bial12g02386 . . . . . Amtr02g04047 . Smso13g00171 . . . . . . Stre9g01623 . . . . . . . . . . . . . . . . . . . . .
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
   
Gene_GFF
Select Chromosome Start End Strand Old_gene Gene Num
4 63007766 63014272 - chr4g0778061 Aann4g01178 1178
4 63056931 63064730 + chr4g0778101 Aann4g01179 1179
4 63129197 63134159 - chr4g0778161 Aann4g01183 1183
4 64320879 64323690 + chr4g0778961 Aann4g01185 1185
4 64469535 64474515 + chr4g0779091 Aann4g01188 1188
5 171948511 171954242 - Aargg5g28360.1 Aary5g02836 2836
5 172024330 172031004 + Aargg5g28370.1 Aary5g02837 2837
5 172178629 172182264 - Aargg5g28400.1 Aary5g02840 2840
5 172451300 172453144 + Aargg5g28420.1 Aary5g02842 2842
5 172599072 172601048 + Aargg5g28440.1 Aary5g02844 2844
13 197498062 197501618 - Aargg13g33020.1 Aary13g03302 3302
13 197860161 197862032 + Aargg13g33030.1 Aary13g03303 3303
2 80724709 80726691 - AtrifAMIRv0_Chr02g0136431 Amtr02g04047 4047
2 80761219 80763605 + AtrifAMIRv0_Chr02g0136451 Amtr02g04049 4049
2 80800082 80805718 + AtrifAMIRv0_Chr02g0136471 Amtr02g04051 4051
1 11280868 11286336 - AmiAMIRv0_Chr01g0005291 Armi1g00529 529
1 11362354 11373319 + AmiAMIRv0_Chr01g0005321 Armi1g00532 532
1 11376343 11377659 - AmiAMIRv0_Chr01g0005331 Armi1g00533 533
1 11388426 11389144 + AmiAMIRv0_Chr01g0005341 Armi1g00534 534
1 11389395 11391593 - AmiAMIRv0_Chr01g0005351 Armi1g00535 535
1 11477931 11479890 + AmiAMIRv0_Chr01g0005361 Armi1g00536 536
1 11488043 11490025 + AmiAMIRv0_Chr01g0005371 Armi1g00537 537
4 16575267 16579879 - g10007.t1 Bial4g01339 1339
4 78056260 78061719 - g43263.t1 Bial4g03424 3424
4 78074328 78078518 + g43267.t1 Bial4g03428 3428
4 78080583 78085448 - g43268.t1 Bial4g03429 3429
4 78100785 78104938 - g43270.t1 Bial4g03431 3431
12 54157226 54163170 - g35580.t1 Bial12g02381 2381
12 54175812 54177688 - g35583.t1 Bial12g02384 2384
12 54186783 54188759 + g35585.t1 Bial12g02386 2386
16 14951919 14956425 - g119135.t1 Bial16g01168 1168
16 72338103 72343556 - g127380.t1 Bial16g02820 2820
16 72356167 72360905 + g127377.t1 Bial16g02823 2823
16 72386334 72388420 + g127376.t1 Bial16g02824 2824
16 72390372 72394417 - g127375.t1 Bial16g02825 2825
24 53045004 53050943 - g67904.t1 Bial24g02238 2238
24 53063312 53065118 - g67907.t1 Bial24g02241 2241
24 53075111 53077087 + g67909.t1 Bial24g02243 2243
3 6060846 6066674 - CtAH03T0041100.1 Cati3g00584 584
3 6073446 6083795 + CtAH03T0041200.2 Cati3g00586 586
3 6087851 6089955 - CtAH03T0041300.1 Cati3g00588 588
3 6152346 6156002 + CtAH03T0041700.1 Cati3g00592 592
3 6169141 6171274 + CtAH03T0041900.1 Cati3g00594 594
3 6177173 6181071 + CtAH03T0042000.1 Cati3g00595 595
2 66469811 66473074 - gnl|WGS:LEKV|Ccrd_011018.mRNA.1_mrna Ccar2g01971 1971
2 66476437 66478214 - gnl|WGS:LEKV|Ccrd_011019.mRNA.1_mrna Ccar2g01972 1972
2 66493014 66495249 + gnl|WGS:LEKV|Ccrd_011020.mRNA.1_mrna Ccar2g01973 1973
2 66494074 66496570 - gnl|WGS:LEKV|Ccrd_011021.mRNA.1_mrna Ccar2g01974 1974
2 66503268 66504387 + gnl|WGS:LEKV|Ccrd_011022.mRNA.1_mrna Ccar2g01975 1975
2 66508876 66519826 - gnl|WGS:LEKV|Ccrd_011023.mRNA.1_mrna Ccar2g01976 1976
2 66523402 66529993 + gnl|WGS:LEKV|Ccrd_011024.mRNA.1_mrna Ccar2g01977 1977
2 28272087 28276594 - >KAJ9560692.1 Ceso2g01384 1384
2 28287528 28296191 + >KAJ9560643.1 Ceso2g01385 1385
2 28298697 28300477 - >KAJ9560644.1 Ceso2g01386 1386
2 28444681 28446603 + >KAJ9561150.1 Ceso2g01388 1388
7 280122279 280123071 - CmaNakai_Chr07g0705001 Chma7g08198 8198
13 34432160 34434416 - evm.model.scaffold_597.66 Chmo13g00722 722
13 34533639 34536106 - evm.model.scaffold_597.69 Chmo13g00724 724
13 34741626 34748855 - evm.model.scaffold_597.80_evm.model.scaffold_597.81 Chmo13g00729 729
13 34812770 34818956 + evm.model.scaffold_597.85 Chmo13g00730 730
14 32573500 32575756 - evm.model.scaffold_5143.34 Chmo14g00709 709
14 32646339 32648539 - evm.model.scaffold_5143.24 Chmo14g00710 710
14 32822479 32825869 + evm.model.scaffold_5143.17 Chmo14g00713 713
14 32825949 32826842 - evm.model.scaffold_5143.16 Chmo14g00714 714
14 32847464 32849717 + evm.model.scaffold_489.35 Chmo14g00715 715
14 32871652 32875972 - evm.model.scaffold_489.38 Chmo14g00718 718
14 32911198 32915781 + evm.model.scaffold_489.41 Chmo14g00720 720
15 31416317 31418573 - evm.model.scaffold_1740.76 Chmo15g00591 591
15 31563676 31565872 - evm.model.scaffold_1740.81 Chmo15g00593 593
15 31789462 31794706 + evm.model.scaffold_1740.92 Chmo15g00597 597
15 31794786 31795517 - evm.model.scaffold_1740.93 Chmo15g00598 598
15 31817505 31819913 + evm.model.scaffold_1740.95 Chmo15g00599 599
15 31878175 31887033 - evm.model.scaffold_1740.102 Chmo15g00602 602
15 31998917 32004187 + evm.model.scaffold_1740.112 Chmo15g00603 603
2 39197693 39199675 - Cn0778900 Chna2g00555 555
2 39304018 39307384 - Cn0778920 Chna2g00556 556
2 39490181 39493616 + Cn0778980 Chna2g00561 561
2 39493508 39494532 - Cn0778990 Chna2g00562 562
2 39530633 39532845 + Cn0779040 Chna2g00566 566
2 39782785 39789916 - Cn0172610 Chna2g00573 573
2 39819399 39825206 + Cn0172490 Chna2g00574 574
4 129624975 129627975 - KAI3753568.1 Cich4g04433 4433
4 129658465 129659924 - KAI3753570.1 Cich4g04435 4435
4 129904149 129907316 + KAI3753575.1 Cich4g04440 4440
4 129907426 129908165 - KAI3753576.1 Cich4g04441 4441
4 129919600 129920625 + KAI3753577.1 Cich4g04442 4442
4 129925616 129928889 - KAI3753578.1 Cich4g04443 4443
4 129953488 129958710 + KAI3753580.1 Cich4g04445 4445
5 76579607 76580935 - KAI3509689.1 Cien5g03169 3169
5 76606402 76607141 - KAI3509691.1 Cien5g03171 3171
5 76618445 76619470 + KAI3509692.1 Cien5g03172 3172
5 76623273 76626498 - KAI3509693.1 Cien5g03173 3173
5 76634197 76639596 + KAI3509695.1 Cien5g03175 3175
3 338578757 338586563 + D.indicum_Contig290_G00057.t1 Cind3g02833 2833
3 338504902 338507066 + D.indicum_Contig290_G00058.t1 Cind3g02834 2834
3 338159824 338165088 - D.indicum_Contig415_G00018.t1 Cind3g03791 3791
3 338184044 338191596 + D.indicum_Contig415_G00019.t1 Cind3g03792 3792
4 8650599 8652877 - h2tg000023l_1.g12669.t1 Cobi4g00968 968
4 80975628 80981204 - h2tg000009l_1.g42137.t1 Cobi4g03142 3142
4 81016628 81023731 + h2tg000009l_1.g42134.t1 Cobi4g03145 3145
4 81024752 81026607 - h2tg000009l_1.g42133.t1 Cobi4g03146 3146
4 81040723 81042644 + h2tg000009l_1.g42132.t1 Cobi4g03147 3147
4 81043814 81048147 - h2tg000009l_1.g42131.t1 Cobi4g03148 3148
4 81077996 81086364 + h2tg000009l_1.g42129.t1 Cobi4g03150 3150
7 5523574 5526364 + h1tg000136l.g124393.t1 Dapi7g00271 271
7 5526494 5527747 - h1tg000136l.g124392.t1 Dapi7g00272 272
7 5530016 5532061 + h1tg000136l.g124391.t1 Dapi7g00273 273
7 5534101 5537466 - h1tg000136l.g124389.t1 Dapi7g00275 275
7 5551589 5559946 + h1tg000136l.g124387.t1 Dapi7g00277 277
7 106605881 106607211 + h2tg000057l.g9432.t1 Dapi7g02280 2280
23 6032114 6033825 - h2tg000284l.g80751.t1 Dapi23g00294 294
23 6136500 6139058 + h2tg000284l.g80748.t1 Dapi23g00297 297
23 6139188 6140487 - h2tg000284l.g80747.t1 Dapi23g00298 298
23 6145286 6147412 + h2tg000284l.g80746.t1 Dapi23g00299 299
23 6152062 6155402 - h2tg000284l.g80744.t1 Dapi23g00301 301
23 6167912 6174044 + h2tg000284l.g80742.t1 Dapi23g00303 303
3 31934050 31937241 - XM_043766836.1 Ecan3g02112 2112
3 31940085 31941613 - XM_043762779.1 Ecan3g02113 2113
3 31959597 31963089 + XM_043766558.1 Ecan3g02114 2114
3 31962971 31963923 - XM_043766559.1 Ecan3g02115 2115
3 31976538 31979714 + XM_043767089.1 Ecan3g02116 2116
3 31980060 31986426 - XM_043767088.1 Ecan3g02118 2118
3 31992623 31998959 + XM_043766149.1 Ecan3g02119 2119
6 61088068 61089344 - evm.model.ctg2652.9 Enbr6g01726 1726
6 61123958 61127205 + evm.model.ctg2652.6 Enbr6g01728 1728
6 61138062 61140560 + evm.model.ctg2652.5 Enbr6g01729 1729
6 61141798 61147588 - evm.model.ctg2652.4 Enbr6g01730 1730
6 61152932 61158516 + evm.model.ctg2652.3 Enbr6g01731 1731
1 5167083 5172217 + FliAMIRv0_Chr01g0002541 Fli1g00259 259
1 104547537 104548711 + FliAMIRv0_Chr01g0022741 Fli1g02280 2280
11 8860010 8861197 - FraAMIRv0_Chr11g0209191 Fra11g00896 896
11 79080728 79086047 - FraAMIRv0_Chr11g0225641 Fra11g02542 2542
12 8664273 8665257 - FroAMIRv0_Chr12g0204491 Fro12g00900 900
12 31871647 31876932 - FroAMIRv0_Chr12g0219511 Fro12g02403 2403
2 61106684 61107871 + FsoAMIRv0_Chr02g0052781 Fso2g02459 2459
4 10777567 10778750 - FtrAMIRv0_Chr04g0103231 Ftr4g00889 889
4 120910927 120912036 - FtrAMIRv0_Chr04g0131331 Ftr4g03699 3699
3 58430227 58432128 - GcoAMIRv0_Chr03g0166471 Glco3g01018 1018
3 58486919 58489134 - GcoAMIRv0_Chr03g0166501 Glco3g01021 1021
3 60215681 60216531 - GcoAMIRv0_Chr03g0166601 Glco3g01031 1031
3 60363197 60365285 + GcoAMIRv0_Chr03g0166621 Glco3g01033 1033
3 60480068 60489241 - GcoAMIRv0_Chr03g0166651 Glco3g01036 1036
4 203310788 203313711 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr04g0188951 Hean4g04275 4275
11 14868880 14870975 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0474151 Hean11g00707 707
11 15281266 15285345 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0474241 Hean11g00714 714
11 15284492 15287738 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0474251 Hean11g00715 715
11 15421942 15424920 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0474301 Hean11g00720 720
11 15426086 15434146 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0474321 Hean11g00722 722
11 15515406 15524248 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0474361 Hean11g00725 725
15 147127473 147130938 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0715841 Hean15g03879 3879
15 147460913 147465042 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0715881 Hean15g03883 3883
15 147609911 147616300 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0715931 Hean15g03887 3887
10 11320160 11323869 - >Htub.h1tg000798l.g385.t1 Hetu10g00302 302
11 9099864 9102557 - >Htub.h1tg000030l.g345.t1 Hetu11g00285 285
12 9701944 9708902 - >Htub.h1tg000613l.g205.t1 Hetu12g00278 278
16 143833864 143839379 - >Htub.h1tg002434l.g117.t1 Hetu16g02663 2663
16 143965469 143971946 - >Htub.h1tg002434l.g115.t1 Hetu16g02665 2665
17 136000317 136005830 - >Htub.h1tg000886l.g411.t1 Hetu17g02563 2563
17 136097122 136098448 - >Htub.h1tg000886l.g407.t1 Hetu17g02567 2567
31 19826127 19829856 + >Htub.h1tg001429l.g329.t1 Hetu31g00534 534
31 19830035 19832886 - >Htub.h1tg001429l.g328.t1 Hetu31g00535 535
31 19883157 19885816 + >Htub.h1tg001429l.g327.t1 Hetu31g00536 536
31 19889540 19897284 - >Htub.h1tg001429l.g326.t1 Hetu31g00537 537
31 20015212 20018933 + >Htub.h1tg001429l.g322.t1 Hetu31g00541 541
32 24171922 24174925 + >Htub.h1tg001952l.g168.t1 Hetu32g00597 597
32 24278564 24281255 + >Htub.h1tg001952l.g167.t1 Hetu32g00598 598
32 24285166 24292437 - >Htub.h1tg001952l.g166.t1 Hetu32g00599 599
32 24319843 24327134 + >Htub.h1tg001952l.g165.t1 Hetu32g00600 600
33 24026222 24029552 + >Htub.h1tg000986l.g386.t1 Hetu33g00687 687
33 24029711 24031031 - >Htub.h1tg000986l.g385.t1 Hetu33g00688 688
33 24111117 24113837 + >Htub.h1tg000986l.g383.t1 Hetu33g00690 690
33 24117598 24125383 - >Htub.h1tg000986l.g382.t1 Hetu33g00691 691
33 24222642 24229968 + >Htub.h1tg000986l.g381.t1 Hetu33g00692 692
7 132092385 132094829 + CAI9294948.1 Laca7g02760 2760
7 132093406 132095233 - CAI9294949.1 Laca7g02761 2761
7 132107374 132108548 + CAI9294950.1 Laca7g02762 2762
7 132115084 132118610 - CAI9294951.1 Laca7g02763 2763
7 132134636 132139931 + CAI9294952.1 Laca7g02764 2764
1 2256235 2258184 - LmiAMIRv0_Chr01g0002671 Lomi1g00267 267
1 2266704 2268207 - LmiAMIRv0_Chr01g0002681 Lomi1g00268 268
1 2275935 2277818 + LmiAMIRv0_Chr01g0002691 Lomi1g00269 269
1 2278027 2278659 - LmiAMIRv0_Chr01g0002701 Lomi1g00270 270
1 2281464 2283901 + LmiAMIRv0_Chr01g0002711 Lomi1g00271 271
1 2285487 2292292 - LmiAMIRv0_Chr01g0002721 Lomi1g00272 272
1 2297502 2302871 + LmiAMIRv0_Chr01g0002731 Lomi1g00273 273
2 49200216 49205565 - LmiAMIRv0_Chr02g0089161 Lomi2g04383 4383
2 49210247 49215806 + LmiAMIRv0_Chr02g0089171 Lomi2g04384 4384
2 49218068 49219961 - LmiAMIRv0_Chr02g0089181 Lomi2g04385 4385
2 49222923 49223565 + LmiAMIRv0_Chr02g0089191 Lomi2g04386 4386
2 49230701 49232258 + LmiAMIRv0_Chr02g0089201 Lomi2g04387 4387
7 179174715 179177921 - >KAJ0197844.1 Lssa7g03402 3402
7 179187809 179189480 - >KAJ0195277.1 Lssa7g03403 3403
7 179267805 179269771 + >KAJ0196314.1 Lssa7g03409 3409
7 179269827 179270558 - >KAJ0194816.1 Lssa7g03410 3410
7 179294632 179295696 + >KAJ0195134.1 Lssa7g03411 3411
7 179298572 179302172 - >KAJ0197654.1 Lssa7g03412 3412
7 179333756 179339345 + >KAJ0197696.1 Lssa7g03413 3413
9 49485734 49487166 - KAD5318185.1 Mimi9g01450 1450
17 12432262 12434113 - KAD3066702.1 Mimi17g00380 380
17 12445196 12448194 + KAD3066703.1 Mimi17g00381 381
17 12448390 12449357 - KAD3066704.1 Mimi17g00382 382
17 12453664 12458790 - KAD3066705.1 Mimi17g00383 383
17 12475859 12481783 + KAD3066706.1 Mimi17g00384 384
17 78202878 78203809 + KAD3068425.1 Mimi17g02103 2103
4 8745700 8747682 - PdyAMIRv0_Chr04g0152791 Pdy4g00471 471
4 8760821 8762279 - PdyAMIRv0_Chr04g0152811 Pdy4g00473 473
4 8775370 8777164 + PdyAMIRv0_Chr04g0152831 Pdy4g00475 475
4 8880220 8884309 + PdyAMIRv0_Chr04g0152871 Pdy4g00479 479
4 8886102 8892254 - PdyAMIRv0_Chr04g0152881 Pdy4g00480 480
4 8929169 8934708 + PdyAMIRv0_Chr04g0152891 Pdy4g00481 481
1 153969685 153974855 - PluAMIRv0_Chr01g0213361 Pslu1g21430 21430
1 153979904 153985980 + PluAMIRv0_Chr01g0213371 Pslu1g21431 21431
1 153987503 153990251 - PluAMIRv0_Chr01g0213381 Pslu1g21432 21432
1 153993729 153994460 + PluAMIRv0_Chr01g0213391 Pslu1g21433 21433
1 153994659 153996674 - PluAMIRv0_Chr01g0213401 Pslu1g21434 21434
1 154007916 154009325 + PluAMIRv0_Chr01g0213421 Pslu1g21436 21436
1 154019351 154021294 + PluAMIRv0_Chr01g0213451 Pslu1g21440 21440
12 10394626 10399404 - SinAMIRv0_Chr12g0360401 Sain12g00476 476
12 10416328 10427719 + SinAMIRv0_Chr12g0360411 Sain12g00477 477
12 10430634 10432128 - SinAMIRv0_Chr12g0360421 Sain12g00478 478
12 10466660 10467752 + SinAMIRv0_Chr12g0360441 Sain12g00480 480
12 10468342 10471047 - SinAMIRv0_Chr12g0360451 Sain12g00481 481
12 10524108 10525545 + SinAMIRv0_Chr12g0360471 Sain12g00483 483
12 10529628 10531610 + SinAMIRv0_Chr12g0360481 Sain12g00484 484
7 1696195 1702362 - KAI3809662.1 Smso7g00082 82
7 1708038 1712979 + KAI3809663.1 Smso7g00083 83
7 1714272 1719603 - KAI3809664.1 Smso7g00084 84
7 1722354 1724007 + KAI3809665.1 Smso7g00085 85
7 1724196 1726202 - KAI3809666.1 Smso7g00086 86
10 10512437 10514472 - KAI3801232.1 Smso10g00985 985
13 10870294 10872276 - KAI3786428.1 Smso13g00171 171
13 10939432 10941970 + KAI3786430.1 Smso13g00173 173
13 11176284 11182436 + KAI3786433.1 Smso13g00176 176
20 20228668 20230240 - KAI3742139.1 Smso20g01143 1143
29 1784133 1790950 - KAI3675083.1 Smso29g00089 89
29 1794357 1798784 + KAI3675084.1 Smso29g00090 90
29 1801742 1804501 - KAI3675085.1 Smso29g00091 91
29 1807583 1809051 + KAI3675086.1 Smso29g00092 92
29 1809268 1811227 - KAI3675087.1 Smso29g00093 93
5 27677870 27684808 - transfrag11166.t01 Soca5g02541 2541
5 27701774 27703945 - transfrag11168.t01 Soca5g02543 2543
5 27712800 27716251 - transfrag11170.t01 Soca5g02544 2544
5 27735897 27737994 + transfrag11171.t01 Soca5g02545 2545
5 27739429 27743859 + asmbl_1992.p1 Soca5g02546 2546
5 30509031 30509876 + augustus47892.t01 Soca5g02752 2752
6 9941702 9943433 - Streb.6G003690.1 Stre6g00369 369
6 9946518 9948969 + Streb.6G003710.1 Stre6g00371 371
6 9952989 9957896 + Streb.6G003720.1 Stre6g00372 372
6 9959136 9966040 - Streb.6G003730.1 Stre6g00373 373
6 9973399 9980822 + Streb.6G003740.1 Stre6g00374 374
6 79073997 79075440 + Streb.6G020660.1 Stre6g02066 2066
9 28553390 28557542 - Streb.9G016190.1 Stre9g01619 1619
9 28579652 28581654 - Streb.9G016210.1 Stre9g01621 1621
9 28617112 28620276 + Streb.9G016230.1 Stre9g01623 1623
1 50599739 50605424 - >KAK1439714.1 Taer1g05534 5534
6 7603672 7605505 - >KAK1420657.1 Taer6g01118 1118
4 55938615 55944910 - TbA04G027270.1 Tamo4g02930 2930
4 55970906 55972258 - TbA04G027190.1 Tamo4g02937 2937
4 55997726 55999805 - TbA04G027130.1 Tamo4g02941 2941
4 56052994 56053494 + TbA04G027050.1 Tamo4g02946 2946
       
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