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Asteraceae Genomic Research Platform

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Hierarchical alignments with the Arctium lappa genome as reference

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Asteraceae genomes. We used Arctium lappa as a reference, and by comparing homologous gene locus maps and Ks values between Arctium lappa and other Asteraceae, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We constructed a 74×31,441 macro-matrices.


Armi_1 Sain_1 Ceso_1 Cati_1 Ccar_1 Cien_1 Cich_1 Lssa_1 Laca_1 Tako_1 Tamo_1 Pslu_1 Lomi_1 Lomi_2 Enbr_1 Ecan_1 Soca_1 Glco_1 Artr_1 Aary_1 Aary_2 Aann_1 Chma_1 Chmo_1 Chmo_2 Chmo_3 Chla_1 Chna_1 Cind_1 Pdy_1 Cobi_1 Hean_1 Bial_1 Bial_2 Dapi_1 Dapi_2 Hetu_1 Hetu_2 Hetu_3 Amtr_1 Smso_1 Smso_2 Taer_1 Fro_1 Fso_1 Ftr_1 Fra_1 Fli_1 Stre_1 Mimi_1 Cobi_2 Hean_2 Bial_3 Bial_4 Dapi_3 Dapi_4 Hetu_4 Hetu_5 Hetu_6 Amtr_2 Smso_3 Smso_4 Taer_2 Fro_2 Fso_2 Ftr_2 Fra_2 Fli_2 Stre_2 Mimi_2
. . . . . . . . . . . . . . . . . . . . . . Chma7g09314 . . . . Chna2g00065 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g01058 Sain12g00848 . Cati3g01082 . Cien5g02992 Cich4g03992 Lssa7g02967 Laca7g02413 Tako4g04647 Tamo4g03374 Pslu1g21921 Lomi1g00062 . Enbr6g01867 Ecan3g01801 Soca5g03087 Glco3g00521 Artr3g13037 . Aary13g03631 Aann4g01708 . . . . . . . Pdy4g00088 . . . . . . . . . . . . . . . . . . . . Cobi4g03381 Hean16g01345 . . Dapi7g00046 Dapi23g00055 Hetu48g00962 Hetu46g01120 Hetu47g01081 Amtr01g04441 Smso7g00273 Smso29g00311 Taer1g05758 Fro12g02595 Fso2g00048 Ftr4g03879 Fra11g02719 Fli1g00072 Stre6g00088 Mimi17g00099
Armi1g01062 Sain12g00852 . . . Cien5g02991 Cich4g03989 Lssa7g02959 Laca7g02410 Tako4g04650 Tamo4g03377 Pslu1g21931 Lomi1g00061 . Enbr6g01868 Ecan3g01800 Soca5g03088 . Artr3g13041 . Aary13g03632 Aann4g01709 . . . . . . . Pdy4g00086 . Hean4g04559 . . . . . . . . . . Taer1g05759 Fro12g02596 Fso2g00047 Ftr4g03881 Fra11g02718 Fli1g00069 Stre6g00087 Mimi9g01619 Cobi4g03382 Hean16g01342 . . . . . . . Amtr01g04444 . . Taer1g05759 Fro12g02596 Fso2g00047 Ftr4g03881 Fra11g02718 Fli1g00069 Stre6g00087 Mimi17g00098
Armi1g01064 Sain12g00854 Ceso2g01695 Cati3g01084 . Cien5g02990 Cich4g03988 Lssa7g02958 Laca7g02409 Tako4g04651 Tamo4g03378 Pslu1g21934 Lomi1g00060 Lomi2g04596 . Ecan3g01798 Soca5g03089 . Artr3g13042 . Aary13g03633 Aann4g01710 . . . . . . . Pdy4g00085 . Hean4g04560 . . Dapi16g02096 Dapi23g00053 . . . Amtr06g04437 . Smso26g02097 Taer1g05760 Fro12g02597 Fso2g00046 Ftr4g03882 Fra11g02717 Fli1g00068 Stre6g00086 . Cobi4g03383 Hean16g01341 . . Dapi7g00044 Dapi23g00053 . . . Amtr01g04445 Smso7g00277 Smso29g00313 Taer1g05760 Fro12g02597 Fso2g00046 Ftr4g03882 Fra11g02717 Fli1g00068 Stre6g00086 Mimi17g00097
Armi1g01066 Sain12g00855 . . . . . Lssa7g02956 . . Tamo4g03380 Pslu1g21935 . . . Ecan3g01795 Soca5g03091 . Artr3g13050 . . Aann4g01718 . . . Chmo15g00180 Chla6g06923 Chna2g00063 Cind3g03230 Pdy4g00084 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g01067 Sain12g00856 . . . Cien5g02988 Cich4g03985 Lssa7g02955 Laca7g02408 Tako4g04655 . Pslu1g21936 Lomi1g00059 . . Ecan3g01794 Soca5g03092 . Artr3g13067 . . Aann4g01721 . . . . . . . Pdy4g00083 . Hean4g04561 . . Dapi16g02098 Dapi23g00051 Hetu11g00043 Hetu12g00046 Hetu10g00074 Amtr06g04439 . Smso26g02098 Taer1g05762 Fro12g02598 Fso2g00045 Ftr4g03883 Fra11g02716 Fli1g00067 Stre6g00085 Mimi9g01622 . Hean16g01340 . . Dapi7g00043 Dapi23g00051 Hetu48g00945 Hetu46g01139 Hetu47g01103 Amtr01g04448 . Smso29g00314 Taer1g05762 Fro12g02598 Fso2g00045 Ftr4g03883 Fra11g02716 Fli1g00067 Stre6g00085 Mimi17g00096
Armi1g01073 Sain12g00857 . Cati3g01088 . Cien5g02984 Cich4g03983 Lssa7g02952 Laca7g02405 Tako4g04657 Tamo4g03383 Pslu1g21937 Lomi1g00058 Lomi2g04597 Enbr6g01877 Ecan3g01793 Soca5g03093 Glco3g00562 Artr3g13072 Aary5g03149 Aary13g03643 Aann4g01725 Chma7g09345 Chmo13g00140 Chmo14g00198 Chmo15g00164 Chla6g06937 Chna2g00058 Cind3g03221 Pdy4g00081 . Hean4g04562 . . Dapi16g02099 Dapi23g00049 . Hetu12g00045 Hetu10g00072 Amtr06g04440 . Smso26g02100 Taer1g05764 Fro12g02599 Fso2g00044 Ftr4g03885 Fra11g02715 Fli1g00066 Stre6g00084 . . Hean16g01335 . . Dapi7g00041 Dapi23g00049 Hetu48g00941 Hetu46g01144 Hetu47g01106 Amtr01g04449 Smso7g00279 Smso29g00315 Taer1g05764 Fro12g02599 Fso2g00044 Ftr4g03885 Fra11g02715 Fli1g00066 Stre6g00084 Mimi17g00095
Armi1g01074 . . . . Cien5g02982 Cich4g03982 Lssa7g02951 Laca7g02404 . Tamo4g03384 Pslu1g21939 Lomi1g00057 Lomi2g04598 Enbr6g01879 Ecan3g01791 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cobi4g03387 Hean16g01330 . . Dapi7g00040 Dapi23g00047 Hetu48g00939 Hetu46g01147 Hetu47g01108 . Smso7g00280 Smso29g00318 . Fro12g02600 . . Fra11g02714 Fli1g00065 . .
Armi1g01075 Sain12g00858 . Cati3g01091 Ccar2g01754 Cien5g02981 Cich4g03981 Lssa7g02950 Laca7g02403 Tako4g04658 Tamo4g03385 Pslu1g21940 Lomi1g00056 Lomi2g04599 Enbr6g01885 Ecan3g01789 Soca5g03096 Glco3g00563 Artr3g13073 Aary5g03150 Aary13g03644 Aann4g01726 Chma7g09349 . . . . Chna2g00056 Cind3g03220 Pdy4g00080 . Hean4g04563 . . Dapi16g02100 . . . . . . Smso26g02101 . Fro12g02601 Fso2g00043 Ftr4g03887 Fra11g02713 Fli1g00061 . . . . . . . . . . . . . . . . . . . . . .
Armi1g01077 . . . . . . . . . . Pslu1g21947 Lomi1g00055 Lomi2g04600 Enbr6g01886 Ecan3g01788 Soca5g03097 . . . . . Chma7g09364 Chmo13g00135 Chmo14g00191 Chmo15g00157 Chla6g06962 Chna2g00052 Cind3g03217 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
First Page 76 of 3145 Last
Gene_GFF
Chromosome Start End Strand Old_gene Gene Num
4 78159082 78164437 + chr4g0792031 Aann4g01708 1708
4 78183759 78186598 + chr4g0792051 Aann4g01709 1709
4 78189271 78195803 - chr4g0792061 Aann4g01710 1710
4 78376129 78377852 + chr4g0792291 Aann4g01718 1718
4 78426914 78427462 + chr4g0792371 Aann4g01721 1721
4 78469592 78474550 + chr4g0792421 Aann4g01725 1725
4 78481703 78489640 - chr4g0792431 Aann4g01726 1726
5 191879299 191883817 + Aargg5g31490.1 Aary5g03149 3149
5 191889758 191896711 - Aargg5g31500.1 Aary5g03150 3150
13 218338986 218343327 + Aargg13g36310.1 Aary13g03631 3631
13 218429146 218430384 + Aargg13g36320.1 Aary13g03632 3632
13 218435605 218441716 - Aargg13g36330.1 Aary13g03633 3633
13 219061127 219067693 + Aargg13g36430.1 Aary13g03643 3643
13 219069199 219076170 - Aargg13g36440.1 Aary13g03644 3644
1 119293267 119300072 + AtrifAMIRv0_Chr01g0044411 Amtr01g04441 4441
1 119394330 119395586 + AtrifAMIRv0_Chr01g0044441 Amtr01g04444 4444
1 119401268 119409184 - AtrifAMIRv0_Chr01g0044451 Amtr01g04445 4445
1 119430205 119533418 + AtrifAMIRv0_Chr01g0044471 Amtr01g04448 4448
1 119563235 119566667 + AtrifAMIRv0_Chr01g0044491 Amtr01g04449 4449
6 98080611 98085169 - AtrifAMIRv0_Chr06g0432621 Amtr06g04437 4437
6 98132483 98132827 + AtrifAMIRv0_Chr06g0432641 Amtr06g04439 4439
6 98178982 98192593 + AtrifAMIRv0_Chr06g0432651 Amtr06g04440 4440
1 29070648 29075966 + AmiAMIRv0_Chr01g0010581 Armi1g01058 1058
1 29210500 29211747 + AmiAMIRv0_Chr01g0010621 Armi1g01062 1062
1 29288410 29298540 - AmiAMIRv0_Chr01g0010641 Armi1g01064 1064
1 29398240 29399451 + AmiAMIRv0_Chr01g0010661 Armi1g01066 1066
1 29412108 29412545 + AmiAMIRv0_Chr01g0010671 Armi1g01067 1067
1 29527634 29533220 + AmiAMIRv0_Chr01g0010731 Armi1g01073 1073
1 29603439 29622919 + AmiAMIRv0_Chr01g0010741 Armi1g01074 1074
1 29624852 29632188 - AmiAMIRv0_Chr01g0010751 Armi1g01075 1075
1 29714472 29732582 + AmiAMIRv0_Chr01g0010771 Armi1g01077 1077
3 451003306 451004687 + AtridAMIRv0_Chr03g0437731 Artr3g13037 13037
3 451040039 451041277 + AtridAMIRv0_Chr03g0437771 Artr3g13041 13041
3 451047429 451052258 - AtridAMIRv0_Chr03g0437781 Artr3g13042 13042
3 451156509 451157720 + AtridAMIRv0_Chr03g0437861 Artr3g13050 13050
3 451849759 452015561 + AtridAMIRv0_Chr03g0438031 Artr3g13067 13067
3 452114306 452246899 + AtridAMIRv0_Chr03g0438081 Artr3g13072 13072
3 452120346 452294841 - AtridAMIRv0_Chr03g0438091 Artr3g13073 13073
3 15568456 15629601 + CtAH03T0078100.1 Cati3g01082 1082
3 15771964 15779912 - CtAH03T0078300.1 Cati3g01084 1084
3 15932896 15938666 + CtAH03T0078600.1 Cati3g01088 1088
3 15952685 15961268 - CtAH03T0078900.1 Cati3g01091 1091
2 63330139 63337330 - gnl|WGS:LEKV|Ccrd_010799.mRNA.1_mrna Ccar2g01754 1754
2 36890425 36900911 - >KAJ9560979.1 Ceso2g01695 1695
6 281812431 281813374 + ClaG1_Chr06g0441701 Chla6g06923 6923
6 282572577 282577220 + ClaG1_Chr06g0441841 Chla6g06937 6937
6 283169971 283180928 - ClaG1_Chr06g0442091 Chla6g06962 6962
7 310817936 310822925 - CmaNakai_Chr07g0716161 Chma7g09314 9314
7 311617161 311621433 + CmaNakai_Chr07g0716471 Chma7g09345 9345
7 311674994 311675281 - CmaNakai_Chr07g0716511 Chma7g09349 9349
7 311859655 311866406 + CmaNakai_Chr07g0716661 Chma7g09364 9364
13 5586982 5593570 - evm.model.scaffold_113.138 Chmo13g00135 135
13 5724612 5728711 - evm.model.scaffold_113.128 Chmo13g00140 140
14 8091234 8106958 - evm.model.scaffold_1390.41 Chmo14g00191 191
14 8440842 8445827 - evm.model.scaffold_1390.64 Chmo14g00198 198
15 9272530 9284935 - evm.model.scaffold_212.46 Chmo15g00157 157
15 9369679 9374392 - evm.model.scaffold_212.54 Chmo15g00164 164
15 10131217 10132872 - evm.model.scaffold_212.104 Chmo15g00180 180
2 2066861 2072692 - Cn0498930 Chna2g00052 52
2 2260369 2261050 + Cn0498320 Chna2g00056 56
2 2268856 2274004 - Cn0498300 Chna2g00058 58
2 2423041 2424252 - Cn0498430 Chna2g00063 63
2 2503842 2508533 + Cn1480060 Chna2g00065 65
4 117562170 117567203 + KAI3753116.1 Cich4g03981 3981
4 117572169 117577645 - KAI3753117.1 Cich4g03982 3982
4 117628796 117631584 - KAI3753118.1 Cich4g03983 3983
4 117696099 117696536 - KAI3753120.1 Cich4g03985 3985
4 117721060 117725045 + KAI3753123.1 Cich4g03988 3988
4 117766858 117768105 - KAI3753124.1 Cich4g03989 3989
4 117835241 117838996 - KAI3753127.1 Cich4g03992 3992
5 71306647 71309874 + KAI3509501.1 Cien5g02981 2981
5 71317988 71323982 - KAI3509502.1 Cien5g02982 2982
5 71367683 71370922 - KAI3509504.1 Cien5g02984 2984
5 71442457 71442894 - KAI3509508.1 Cien5g02988 2988
5 71455252 71459164 + KAI3509510.1 Cien5g02990 2990
5 71504262 71505509 - KAI3509511.1 Cien5g02991 2991
5 71549959 71553571 - KAI3509512.1 Cien5g02992 2992
3 373071285 373076490 + D.indicum_Contig308_G00028.t1 Cind3g03217 3217
3 372977623 372984870 - D.indicum_Contig308_G00031.t1 Cind3g03220 3220
3 372972502 372976850 + D.indicum_Contig308_G00032.t1 Cind3g03221 3221
3 372751981 372753691 + D.indicum_Contig308_G00041.t1 Cind3g03230 3230
4 84112139 84113663 + h2tg000064l_1.g27596.t1 Cobi4g03381 3381
4 84125573 84126436 + h2tg000064l_1.g27597.t1 Cobi4g03382 3382
4 84131206 84136541 - h2tg000064l_1.g27598.t1 Cobi4g03383 3383
4 84172755 84183102 + h2tg000064l_1.g27602.t1 Cobi4g03387 3387
7 902560 912797 - h1tg000136l.g124624.t1 Dapi7g00040 40
7 933239 938855 - h1tg000136l.g124623.t1 Dapi7g00041 41
7 956112 956549 - h1tg000136l.g124621.t1 Dapi7g00043 43
7 1018493 1024692 + h1tg000136l.g124620.t1 Dapi7g00044 44
7 1051684 1058573 - h1tg000136l.g124618.t1 Dapi7g00046 46
16 83130815 83135545 - h1tg000026l.g57049.t1 Dapi16g02096 2096
16 83190549 83190989 + h1tg000026l.g57051.t1 Dapi16g02098 2098
16 83197872 83208727 + h1tg000026l.g57052.t1 Dapi16g02099 2099
16 83209472 83223933 - h1tg000026l.g57053.t1 Dapi16g02100 2100
23 1425788 1436543 - h2tg000064l.g12385.t1 Dapi23g00047 47
23 1443877 1460292 - h2tg000064l.g12387.t1 Dapi23g00049 49
23 1502691 1503128 - h2tg000064l.g12389.t1 Dapi23g00051 51
23 1512577 1518541 + h2tg000064l.g12391.t1 Dapi23g00053 53
23 1553196 1560168 - h2tg000064l.g12393.t1 Dapi23g00055 55
3 29063032 29069876 - XM_043765125.1 Ecan3g01788 1788
3 29078418 29084955 + XM_043762879.1 Ecan3g01789 1789
3 29113169 29119683 - XM_043764088.1 Ecan3g01791 1791
3 29125179 29129692 - XM_043766030.1 Ecan3g01793 1793
3 29134342 29134992 - XM_043765781.1 Ecan3g01794 1794
3 29136740 29138115 - XM_043766823.1 Ecan3g01795 1795
3 29142446 29149318 + XM_043765228.1 Ecan3g01798 1798
3 29161077 29162778 - XM_043765118.1 Ecan3g01800 1800
3 29191035 29196282 - XM_043765458.1 Ecan3g01801 1801
6 65689211 65696590 + evm.model.ctg1696.4 Enbr6g01867 1867
6 65737377 65738627 + evm.model.ctg1696.3 Enbr6g01868 1868
6 66029989 66034040 + evm.model.ctg2557.8 Enbr6g01877 1877
6 66046116 66053566 + evm.model.ctg2557.6 Enbr6g01879 1879
6 66176276 66182055 - evm.model.ctg1081.4 Enbr6g01885 1885
6 66215785 66221416 + evm.model.ctg1081.3 Enbr6g01886 1886
1 1005665 1014960 + FliAMIRv0_Chr01g0000601 Fli1g00061 61
1 1028978 1042418 - FliAMIRv0_Chr01g0000641 Fli1g00065 65
1 1044975 1050850 - FliAMIRv0_Chr01g0000651 Fli1g00066 66
1 1067096 1067533 - FliAMIRv0_Chr01g0000661 Fli1g00067 67
1 1071602 1076313 + FliAMIRv0_Chr01g0000671 Fli1g00068 68
1 1078898 1080145 - FliAMIRv0_Chr01g0000681 Fli1g00069 69
1 1126098 1132684 - FliAMIRv0_Chr01g0000711 Fli1g00072 72
11 80669458 80677416 + FraAMIRv0_Chr11g0227351 Fra11g02713 2713
11 80679459 80692532 - FraAMIRv0_Chr11g0227361 Fra11g02714 2714
11 80695028 80701463 - FraAMIRv0_Chr11g0227371 Fra11g02715 2715
11 80706824 80707261 - FraAMIRv0_Chr11g0227381 Fra11g02716 2716
11 80711092 80715752 + FraAMIRv0_Chr11g0227391 Fra11g02717 2717
11 80717725 80718981 - FraAMIRv0_Chr11g0227401 Fra11g02718 2718
11 80734492 80740495 - FraAMIRv0_Chr11g0227411 Fra11g02719 2719
12 33779938 33786036 + FroAMIRv0_Chr12g0221431 Fro12g02595 2595
12 33800480 33801727 + FroAMIRv0_Chr12g0221441 Fro12g02596 2596
12 33805744 33810864 - FroAMIRv0_Chr12g0221451 Fro12g02597 2597
12 33814815 33815252 + FroAMIRv0_Chr12g0221461 Fro12g02598 2598
12 33826374 33831260 + FroAMIRv0_Chr12g0221471 Fro12g02599 2599
12 33833989 33845138 + FroAMIRv0_Chr12g0221481 Fro12g02600 2600
12 33847528 33856680 - FroAMIRv0_Chr12g0221491 Fro12g02601 2601
2 521628 529514 + FsoAMIRv0_Chr02g0028621 Fso2g00043 43
2 548216 554506 - FsoAMIRv0_Chr02g0028631 Fso2g00044 44
2 560574 561011 - FsoAMIRv0_Chr02g0028641 Fso2g00045 45
2 565043 569713 + FsoAMIRv0_Chr02g0028651 Fso2g00046 46
2 576725 577981 - FsoAMIRv0_Chr02g0028661 Fso2g00047 47
2 596853 598468 - FsoAMIRv0_Chr02g0028671 Fso2g00048 48
4 122726072 122731887 + FtrAMIRv0_Chr04g0133131 Ftr4g03879 3879
4 122762023 122763279 + FtrAMIRv0_Chr04g0133151 Ftr4g03881 3881
4 122765460 122770134 - FtrAMIRv0_Chr04g0133161 Ftr4g03882 3882
4 122774205 122774540 + FtrAMIRv0_Chr04g0133171 Ftr4g03883 3883
4 122781871 122790381 + FtrAMIRv0_Chr04g0133191 Ftr4g03885 3885
4 122810141 122812577 - FtrAMIRv0_Chr04g0133211 Ftr4g03887 3887
3 29088325 29092587 - GcoAMIRv0_Chr03g0161501 Glco3g00521 521
3 31208758 31213343 + GcoAMIRv0_Chr03g0161911 Glco3g00562 562
3 31214100 31219709 - GcoAMIRv0_Chr03g0161921 Glco3g00563 563
4 207216840 207219559 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr04g0192101 Hean4g04559 4559
4 207223885 207232549 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr04g0192111 Hean4g04560 4560
4 207261001 207261673 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr04g0192121 Hean4g04561 4561
4 207266415 207276993 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr04g0192131 Hean4g04562 4562
4 207278330 207288842 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr04g0192141 Hean4g04563 4563
16 51129742 51137686 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0738321 Hean16g01330 1330
16 51384186 51411437 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0738371 Hean16g01335 1335
16 51791738 51792395 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0738421 Hean16g01340 1340
16 52031881 52042514 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0738441 Hean16g01341 1341
16 52044942 52046528 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0738451 Hean16g01342 1342
16 52249461 52256675 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0738501 Hean16g01345 1345
10 2843213 2852424 - >Htub.h1tg003335l.g265.t1 Hetu10g00072 72
10 2866887 2867324 - >Htub.h1tg003335l.g267.t1 Hetu10g00074 74
11 2106536 2106973 - >Htub.h1tg000030l.g95.t1 Hetu11g00043 43
12 2485308 2489246 - >Htub.h1tg000754l.g248.t1 Hetu12g00045 45
12 2534887 2535324 - >Htub.h1tg000754l.g249.t1 Hetu12g00046 46
46 56951298 56959211 + >Htub.h1tg000086l.g284.t1 Hetu46g01120 1120
46 57783277 57783714 + >Htub.h1tg000086l.g265.t1 Hetu46g01139 1139
46 58071523 58076960 + >Htub.h1tg000086l.g260.t1 Hetu46g01144 1144
46 58280368 58282443 + >Htub.h1tg000086l.g257.t1 Hetu46g01147 1147
47 61463443 61472929 + >Htub.h1tg000672l.g60.t1 Hetu47g01081 1081
47 62243949 62244386 + >Htub.h1tg000672l.g82.t1 Hetu47g01103 1103
47 62518874 62523035 + >Htub.h1tg000672l.g85.t1 Hetu47g01106 1106
47 62704191 62713743 + >Htub.h1tg000672l.g87.t1 Hetu47g01108 1108
48 51163033 51166539 - >Htub.h1tg001458l.g81.t1 Hetu48g00939 939
48 51340566 51356116 - >Htub.h1tg001458l.g83.t1 Hetu48g00941 941
48 51625770 51626207 - >Htub.h1tg001458l.g87.t1 Hetu48g00945 945
48 52367318 52382375 - >Htub.h1tg001458l.g105.t1 Hetu48g00962 962
7 114603030 114606064 + CAI9294573.1 Laca7g02403 2403
7 114612635 114618598 - CAI9294574.1 Laca7g02404 2404
7 114629859 114634758 - CAI9294575.1 Laca7g02405 2405
7 114701260 114701697 - CAI9294578.1 Laca7g02408 2408
7 114778626 114782303 + CAI9294579.1 Laca7g02409 2409
7 114794276 114795523 - CAI9294580.1 Laca7g02410 2410
7 114956560 114960663 - CAI9294583.1 Laca7g02413 2413
1 577228 584065 - LmiAMIRv0_Chr01g0000551 Lomi1g00055 55
1 593275 597497 + LmiAMIRv0_Chr01g0000561 Lomi1g00056 56
1 598942 606313 - LmiAMIRv0_Chr01g0000571 Lomi1g00057 57
1 609804 613310 - LmiAMIRv0_Chr01g0000581 Lomi1g00058 58
1 617864 618304 - LmiAMIRv0_Chr01g0000591 Lomi1g00059 59
1 623956 628049 + LmiAMIRv0_Chr01g0000601 Lomi1g00060 60
1 635230 636477 - LmiAMIRv0_Chr01g0000611 Lomi1g00061 61
1 651199 656064 - LmiAMIRv0_Chr01g0000621 Lomi1g00062 62
2 50922099 50926119 - LmiAMIRv0_Chr02g0091291 Lomi2g04596 4596
2 50935645 50939258 + LmiAMIRv0_Chr02g0091301 Lomi2g04597 4597
2 50944555 50952178 + LmiAMIRv0_Chr02g0091311 Lomi2g04598 4598
2 50953072 50957159 - LmiAMIRv0_Chr02g0091321 Lomi2g04599 4599
2 50964316 50970579 + LmiAMIRv0_Chr02g0091331 Lomi2g04600 4600
7 156827422 156830771 + >KAJ0197389.1 Lssa7g02950 2950
7 156835658 156841721 - >KAJ0195922.1 Lssa7g02951 2951
7 156924212 156927537 - >KAJ0196352.1 Lssa7g02952 2952
7 156991792 156992229 - >KAJ0197828.1 Lssa7g02955 2955
7 156997455 156998732 - >KAJ0198289.1 Lssa7g02956 2956
7 157030343 157034825 + >KAJ0197202.1 Lssa7g02958 2958
7 157071763 157073010 - >KAJ0194670.1 Lssa7g02959 2959
7 157251924 157256837 - >KAJ0198540.1 Lssa7g02967 2967
9 61242910 61244154 + KAD5318354.1 Mimi9g01619 1619
9 61317936 61318373 + KAD5318357.1 Mimi9g01622 1622
17 2922806 2923345 - KAD3066417.1 Mimi17g00095 95
17 2987499 2989668 - KAD3066418.1 Mimi17g00096 96
17 2994685 2996160 + KAD3066419.1 Mimi17g00097 97
17 3007940 3009193 - KAD3066420.1 Mimi17g00098 98
17 3032553 3040057 - KAD3066421.1 Mimi17g00099 99
4 1525927 1574233 + PdyAMIRv0_Chr04g0148871 Pdy4g00080 80
4 1585149 1592365 - PdyAMIRv0_Chr04g0148891 Pdy4g00081 81
4 1623264 1623701 - PdyAMIRv0_Chr04g0148911 Pdy4g00083 83
4 1626771 1628024 - PdyAMIRv0_Chr04g0148921 Pdy4g00084 84
4 1661805 1668134 + PdyAMIRv0_Chr04g0148931 Pdy4g00085 85
4 1673143 1674393 - PdyAMIRv0_Chr04g0148941 Pdy4g00086 86
4 1714476 1721533 - PdyAMIRv0_Chr04g0148961 Pdy4g00088 88
1 157281283 157286445 + PluAMIRv0_Chr01g0218251 Pslu1g21921 21921
1 157378135 157379382 + PluAMIRv0_Chr01g0218351 Pslu1g21931 21931
1 157385032 157386423 - PluAMIRv0_Chr01g0218381 Pslu1g21934 21934
1 157390246 157391487 + PluAMIRv0_Chr01g0218391 Pslu1g21935 21935
1 157393142 157393582 + PluAMIRv0_Chr01g0218401 Pslu1g21936 21936
1 157398445 157402367 + PluAMIRv0_Chr01g0218411 Pslu1g21937 21937
1 157410279 157419915 + PluAMIRv0_Chr01g0218431 Pslu1g21939 21939
1 157421306 157425459 - PluAMIRv0_Chr01g0218441 Pslu1g21940 21940
1 157463069 157468366 + PluAMIRv0_Chr01g0218511 Pslu1g21947 21947
12 21839726 21843663 + SinAMIRv0_Chr12g0364121 Sain12g00848 848
12 22109485 22110732 + SinAMIRv0_Chr12g0364161 Sain12g00852 852
12 22245347 22249324 - SinAMIRv0_Chr12g0364181 Sain12g00854 854
12 22378262 22379515 + SinAMIRv0_Chr12g0364191 Sain12g00855 855
12 22386413 22386850 + SinAMIRv0_Chr12g0364201 Sain12g00856 856
12 22598599 22608501 + SinAMIRv0_Chr12g0364211 Sain12g00857 857
12 22710978 22715182 - SinAMIRv0_Chr12g0364221 Sain12g00858 858
7 4742861 4751871 + KAI3809853.1 Smso7g00273 273
7 4789934 4797388 - KAI3809857.1 Smso7g00277 277
7 4824856 4834664 + KAI3809859.1 Smso7g00279 279
7 4861396 4872679 + KAI3809860.1 Smso7g00280 280
26 48316824 48325145 - KAI3695582.1 Smso26g02097 2097
26 48346440 48346877 + KAI3695583.1 Smso26g02098 2098
26 48369112 48373839 + KAI3695585.1 Smso26g02100 2100
26 48374688 48385229 - KAI3695586.1 Smso26g02101 2101
29 4991030 5000126 + KAI3675305.1 Smso29g00311 311
29 5042056 5054315 - KAI3675307.1 Smso29g00313 313
29 5058125 5058562 + KAI3675308.1 Smso29g00314 314
29 5084546 5091554 + KAI3675309.1 Smso29g00315 315
29 5103836 5105077 + KAI3675312.1 Smso29g00318 318
5 34471589 34476990 + augustus42827.t01 Soca5g03087 3087
5 34503799 34505421 + asmbl_5046.p1 Soca5g03088 3088
5 34510565 34521805 - transfrag28594.t02 Soca5g03089 3089
5 34529229 34530667 + transfrag28592.t01 Soca5g03091 3091
5 34534130 34534810 + asmbl_5044.p1 Soca5g03092 3092
5 34539668 34543969 + transfrag28590.t01 Soca5g03093 3093
5 34572912 34579688 - transfrag28587.t01 Soca5g03096 3096
5 34591871 34599017 + transfrag28586.t01 Soca5g03097 3097
6 2194673 2201228 - Streb.6G000840.1 Stre6g00084 84
6 2224529 2225345 - Streb.6G000850.1 Stre6g00085 85
6 2226188 2231506 + Streb.6G000860.1 Stre6g00086 86
6 2235282 2236536 - Streb.6G000870.1 Stre6g00087 87
6 2251842 2258511 - Streb.6G000880.1 Stre6g00088 88
1 52280331 52285714 + >KAK1439933.1 Taer1g05758 5758
1 52306841 52308079 + >KAK1439934.1 Taer1g05759 5759
1 52310323 52315112 - >KAK1439935.1 Taer1g05760 5760
1 52321391 52321828 + >KAK1439937.1 Taer1g05762 5762
1 52333549 52339839 + >KAK1439939.1 Taer1g05764 5764
4 107368720 107374003 + TkA04G425560.1 Tako4g04647 4647
4 107445864 107447068 + TkA04G425810.1 Tako4g04650 4650
4 107452845 107456988 - TkA04G425850.1 Tako4g04651 4651
4 107512358 107512795 + TkA04G426030.1 Tako4g04655 4655
4 107555200 107560922 + TkA04G426180.1 Tako4g04657 4657
4 107759674 107763005 - TkA04G426950.1 Tako4g04658 4658
4 65363745 65368413 + TbA04G015430.1 Tamo4g03374 3374
4 65416406 65417610 + TbA04G015370.1 Tamo4g03377 3377
4 65444585 65447507 - TbA04G015330.1 Tamo4g03378 3378
4 65460467 65461768 + TbA04G015310.1 Tamo4g03380 3380
4 65475345 65480786 + TbA04G015270.1 Tamo4g03383 3383
4 65482752 65488483 + TbA04G015260.1 Tamo4g03384 3384
4 65489725 65493199 - TbA04G015250.1 Tamo4g03385 3385
       
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