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AGRP

Asteraceae Genomic Research Platform

Gene Search

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Example:

Hierarchical alignments with the Arctium lappa genome as reference

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Asteraceae genomes. We used Arctium lappa as a reference, and by comparing homologous gene locus maps and Ks values between Arctium lappa and other Asteraceae, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We constructed a 74×31,441 macro-matrices.


Select Armi_1 Sain_1 Ceso_1 Cati_1 Ccar_1 Cien_1 Cich_1 Lssa_1 Laca_1 Tako_1 Tamo_1 Pslu_1 Lomi_1 Lomi_2 Enbr_1 Ecan_1 Soca_1 Glco_1 Artr_1 Aary_1 Aary_2 Aann_1 Chma_1 Chmo_1 Chmo_2 Chmo_3 Chla_1 Chna_1 Cind_1 Pdy_1 Cobi_1 Hean_1 Bial_1 Bial_2 Dapi_1 Dapi_2 Hetu_1 Hetu_2 Hetu_3 Amtr_1 Smso_1 Smso_2 Taer_1 Fro_1 Fso_1 Ftr_1 Fra_1 Fli_1 Stre_1 Mimi_1 Cobi_2 Hean_2 Bial_3 Bial_4 Dapi_3 Dapi_4 Hetu_4 Hetu_5 Hetu_6 Amtr_2 Smso_3 Smso_4 Taer_2 Fro_2 Fso_2 Ftr_2 Fra_2 Fli_2 Stre_2 Mimi_2
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00618 Sain12g00519 . Cati3g00655 Ccar2g01948 . Cich4g04389 Lssa7g03355 Laca7g02727 . . Pslu1g21475 Lomi1g00254 Lomi2g04406 Enbr6g01486 Ecan3g02095 Soca5g02781 Glco3g00982 Artr3g11821 . Aary13g03327 Aann4g01235 Chma7g08388 Chmo13g00686 Chmo14g00678 Chmo15g00551 . Chna2g00516 Cind3g02779 Pdy4g00437 . . . . . . . . . . . . . . . . . . . . Cobi4g03166 Hean11g00687 Bial4g03466 Bial16g02869 Dapi7g00242 Dapi23g00262 Hetu32g00541 Hetu31g00478 Hetu33g00639 . Smso7g00098 Smso29g00132 . Fro12g02425 . Ftr4g03717 Fra11g02557 Fli1g00245 Stre6g00313 .
Armi1g00619 Sain12g00521 . Cati3g00656 Ccar2g01947 Cien5g03153 Cich4g04388 Lssa7g03354 Laca7g02726 . Tamo4g03003 . . . Enbr6g01485 Ecan3g02094 Soca5g02783 Glco3g00981 Artr3g11822 . Aary13g03328 Aann4g01236 Chma7g08389 Chmo13g00685 Chmo14g00677 Chmo15g00550 . Chna2g00515 Cind3g02778 Pdy4g00436 . . . . . . . . . . . . . . . . . . . . Cobi4g03167 Hean11g00686 Bial4g03467 Bial16g02870 Dapi7g00241 Dapi23g00261 Hetu32g00540 Hetu31g00477 Hetu33g00638 . Smso7g00099 Smso29g00133 Taer1g05570 Fro12g02427 Fso2g00145 Ftr4g03720 Fra11g02559 Fli1g00244 Stre6g00312 Mimi17g00332
Armi1g00620 Sain12g00522 Ceso2g01439 Cati3g00657 . Cien5g03152 Cich4g04387 Lssa7g03353 Laca7g02725 . Tamo4g03004 Pslu1g21476 Lomi1g00253 Lomi2g04407 Enbr6g01483 Ecan3g02093 Soca5g02784 Glco3g00980 Artr3g11824 . Aary13g03329 Aann4g01237 Chma7g08224 . . . . Chna2g00514 Cind3g02777 Pdy4g00434 . . . . . . . . . . . . . . . . . . . . Cobi4g03168 Hean11g00685 Bial4g03468 Bial16g02871 Dapi7g00240 Dapi23g00260 . Hetu31g00476 Hetu33g00637 . Smso7g00100 Smso29g00134 Taer1g05571 Fro12g02428 . Ftr4g03721 Fra11g02560 Fli1g00243 Stre6g00311 Mimi17g00331
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00622 Sain12g00524 Ceso2g01440 Cati3g00658 Ccar2g01946 Cien5g03151 Cich4g04384 Lssa7g03352 Laca7g02724 . Tamo4g03006 Pslu1g21481 Lomi1g00251 . Enbr6g01482 Ecan3g02092 Soca5g02785 Glco3g00971 Artr3g11830 . Aary13g03330 Aann4g01239 Chma7g08396 . Chmo14g00673 Chmo15g00544 . Chna2g00512 Cind3g03513 Pdy4g00433 . Hean4g04336 . . Dapi16g01894 Dapi23g00259 Hetu11g00226 Hetu12g00224 Hetu10g00243 . . Smso26g01869 Taer1g05572 Fro12g02429 . Ftr4g03723 Fra11g02561 Fli1g00242 Stre6g00310 Mimi9g01456 . . . . . . . . . . . . . . . . . . . .
Armi1g00623 Sain12g00525 Ceso2g01441 Cati3g00659 Ccar2g01945 . Cich4g04382 Lssa7g03351 Laca7g02723 . Tamo4g03007 Pslu1g21486 Lomi1g00249 Lomi2g04410 Enbr6g01481 Ecan3g02088 Soca5g02787 Glco3g00970 . . . Aann4g01240 Chma7g08397 . Chmo14g00672 Chmo15g00543 . Chna2g00511 Cind3g03514 Pdy4g00432 . . . . . . . . . . . . . . . . . . . . Cobi4g03170 Hean11g00684 Bial4g03471 Bial16g02873 Dapi7g00238 Dapi23g00258 . Hetu31g00475 Hetu33g00636 . Smso7g00105 . Taer1g05573 Fro12g02430 . Ftr4g03724 Fra11g02562 Fli1g00241 Stre6g00309 Mimi17g00329
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00625 Sain12g00526 Ceso2g01442 Cati3g00661 Ccar2g01944 Cien5g03150 Cich4g04378 Lssa7g03350 Laca7g02722 Tako4g04088 Tamo4g03008 Pslu1g21487 Lomi1g00248 Lomi2g04411 . Ecan3g02087 Soca5g02789 Glco3g00969 Artr3g11832 . Aary13g03333 Aann4g01242 Chma7g08398 Chmo13g00682 Chmo14g00671 Chmo15g00542 . Chna2g00510 Cind3g03515 Pdy4g00431 . . . . . . . . . . . . . . . . . . . . Cobi4g03171 Hean11g00683 Bial4g03472 Bial16g02874 Dapi7g00237 Dapi23g00257 Hetu32g00539 Hetu31g00474 Hetu33g00635 . Smso7g00106 Smso29g00136 . . . . . . . .
Armi1g00626 . . Cati3g00663 . Cien5g03149 Cich4g04377 Lssa7g03349 Laca7g02721 . . Pslu1g21488 . . Enbr6g01480 Ecan3g02086 Soca5g02790 Glco3g00968 Artr3g11836 . Aary13g03334 Aann4g01243 Chma7g08399 Chmo13g00681 Chmo14g00670 Chmo15g00541 . Chna2g00509 Cind3g03516 Pdy4g00430 . . . . . . . . . . . . . . . . . . . . Cobi4g03172 Hean11g00682 Bial4g03473 Bial16g02875 Dapi7g00236 Dapi23g00256 Hetu32g00538 Hetu31g00473 Hetu33g00633 . Smso7g00107 Smso29g00139 Taer1g05575 Fro12g02431 Fso2g00142 Ftr4g03725 Fra11g02563 Fli1g00239 Stre6g00308 Mimi17g00328
   
Gene_GFF
Select Chromosome Start End Strand Old_gene Gene Num
4 66448838 66455348 - chr4g0780721 Aann4g01235 1235
4 66455350 66463802 - chr4g0780731 Aann4g01236 1236
4 66467988 66472078 + chr4g0780741 Aann4g01237 1237
4 66517879 66524299 + chr4g0780791 Aann4g01239 1239
4 66524301 66526700 - chr4g0780801 Aann4g01240 1240
4 66527956 66536416 + chr4g0780821 Aann4g01242 1242
4 66537105 66540964 + chr4g0780831 Aann4g01243 1243
13 199974071 199976689 - Aargg13g33270.1 Aary13g03327 3327
13 199983520 199989737 - Aargg13g33280.1 Aary13g03328 3328
13 200054462 200056822 + Aargg13g33290.1 Aary13g03329 3329
13 200131392 200137828 + Aargg13g33300.1 Aary13g03330 3330
13 200173679 200180518 + Aargg13g33330.1 Aary13g03333 3333
13 200182600 200187128 + Aargg13g33340.1 Aary13g03334 3334
1 14524195 14527792 - AmiAMIRv0_Chr01g0006181 Armi1g00618 618
1 14534936 14547448 - AmiAMIRv0_Chr01g0006191 Armi1g00619 619
1 14570680 14573987 + AmiAMIRv0_Chr01g0006201 Armi1g00620 620
1 14619465 14625502 + AmiAMIRv0_Chr01g0006221 Armi1g00622 622
1 14636299 14640448 - AmiAMIRv0_Chr01g0006231 Armi1g00623 623
1 14664259 14675773 + AmiAMIRv0_Chr01g0006251 Armi1g00625 625
1 14682013 14692712 + AmiAMIRv0_Chr01g0006261 Armi1g00626 626
3 404853702 404857051 - AtridAMIRv0_Chr03g0425571 Artr3g11821 11821
3 404867675 404873129 - AtridAMIRv0_Chr03g0425581 Artr3g11822 11822
3 405020706 405023280 + AtridAMIRv0_Chr03g0425601 Artr3g11824 11824
3 405186598 405190984 + AtridAMIRv0_Chr03g0425661 Artr3g11830 11830
3 405197047 405202145 + AtridAMIRv0_Chr03g0425681 Artr3g11832 11832
3 405419220 405423030 - AtridAMIRv0_Chr03g0425721 Artr3g11836 11836
4 78993613 78996091 - g43305.t1 Bial4g03466 3466
4 78999557 79008824 - g43306.t1 Bial4g03467 3467
4 79019478 79022079 + g43307.t1 Bial4g03468 3468
4 79041866 79044783 - g43310.t1 Bial4g03471 3471
4 79047915 79053160 + g43311.t1 Bial4g03472 3472
4 79063272 79066801 + g43312.t1 Bial4g03473 3473
16 73148007 73150477 - g127331.t1 Bial16g02869 2869
16 73153938 73163197 - g127330.t1 Bial16g02870 2870
16 73170124 73172524 + g127329.t1 Bial16g02871 2871
16 73183366 73186022 - g127327.t1 Bial16g02873 2873
16 73189631 73197143 + g127326.t1 Bial16g02874 2874
16 73200394 73204580 + g127325.t1 Bial16g02875 2875
3 7220447 7225181 - CtAH03T0047100.1 Cati3g00655 655
3 7228851 7239877 - CtAH03T0047200.1 Cati3g00656 656
3 7245870 7250287 + CtAH03T0047300.1 Cati3g00657 657
3 7279316 7286301 + CtAH03T0047400.1 Cati3g00658 658
3 7285665 7289730 - CtAH03T0047500.1 Cati3g00659 659
3 7292598 7299134 + CtAH03T0047600.1 Cati3g00661 661
3 7319829 7329259 + CtAH03T0047700.1 Cati3g00663 663
2 66027091 66034080 - gnl|WGS:LEKV|Ccrd_010990.mRNA.1_mrna Ccar2g01944 1944
2 66035779 66039555 + gnl|WGS:LEKV|Ccrd_010991.mRNA.1_mrna Ccar2g01945 1945
2 66040960 66048217 - gnl|WGS:LEKV|Ccrd_010992.mRNA.1_mrna Ccar2g01946 1946
2 66063669 66073363 + gnl|WGS:LEKV|Ccrd_010994.mRNA.1_mrna Ccar2g01947 1947
2 66076931 66080734 + gnl|WGS:LEKV|Ccrd_010995.mRNA.1_mrna Ccar2g01948 1948
2 29926187 29928510 + >KAJ9560813.1 Ceso2g01439 1439
2 29938919 29945447 + >KAJ9560812.1 Ceso2g01440 1440
2 29945899 29948464 - >KAJ9560816.1 Ceso2g01441 1441
2 29950050 29955654 + >KAJ9560811.1 Ceso2g01442 1442
7 280943671 280948093 + CmaNakai_Chr07g0705261 Chma7g08224 8224
7 286532632 286535634 - CmaNakai_Chr07g0706901 Chma7g08388 8388
7 286539925 286546270 - CmaNakai_Chr07g0706911 Chma7g08389 8389
7 286692387 286696947 + CmaNakai_Chr07g0706981 Chma7g08396 8396
7 286698166 286701160 - CmaNakai_Chr07g0706991 Chma7g08397 8397
7 286750652 286756482 + CmaNakai_Chr07g0707001 Chma7g08398 8398
7 286759716 286763176 + CmaNakai_Chr07g0707011 Chma7g08399 8399
13 31937482 31941311 - evm.model.scaffold_530.228 Chmo13g00681 681
13 31943989 31949966 - evm.model.scaffold_530.230 Chmo13g00682 682
13 32256823 32263967 + evm.model.scaffold_530.243 Chmo13g00685 685
13 32265953 32269444 + evm.model.scaffold_530.244 Chmo13g00686 686
14 30042495 30046704 - evm.model.scaffold_464.79 Chmo14g00670 670
14 30050359 30056262 - evm.model.scaffold_464.78 Chmo14g00671 671
14 30127836 30131727 + evm.model.scaffold_464.75 Chmo14g00672 672
14 30132247 30138562 - evm.model.scaffold_464.74 Chmo14g00673 673
14 30434516 30441312 + evm.model.scaffold_464.60 Chmo14g00677 677
14 30443045 30446512 + evm.model.scaffold_464.59 Chmo14g00678 678
15 28332410 28336257 - evm.model.scaffold_504.92 Chmo15g00541 541
15 28353714 28358589 - evm.model.scaffold_504.91 Chmo15g00542 542
15 28363300 28365712 + evm.model.scaffold_504.90 Chmo15g00543 543
15 28366677 28371539 - evm.model.scaffold_504.89 Chmo15g00544 544
15 28701507 28708739 + evm.model.scaffold_504.78 Chmo15g00550 550
15 28711334 28714894 + evm.model.scaffold_504.77 Chmo15g00551 551
2 35370705 35374434 - Cn0778100 Chna2g00509 509
2 35376050 35381538 - Cn0778110 Chna2g00510 510
2 35381950 35385426 + Cn0778120 Chna2g00511 511
2 35385629 35391034 - Cn0778130 Chna2g00512 512
2 35705595 35709451 - Cn0778220 Chna2g00514 514
2 35790812 35797565 + Cn0778230 Chna2g00515 515
2 35807337 35811354 + Cn0778240 Chna2g00516 516
4 127811201 127814231 - KAI3753512.1 Cich4g04377 4377
4 127818576 127821471 - KAI3753513.1 Cich4g04378 4378
4 127867957 127869591 + KAI3753517.1 Cich4g04382 4382
4 127871039 127874052 - KAI3753519.1 Cich4g04384 4384
4 127896792 127898742 - KAI3753522.1 Cich4g04387 4387
4 127902777 127907271 + KAI3753523.1 Cich4g04388 4388
4 127914460 127916163 + KAI3753524.1 Cich4g04389 4389
5 75646038 75648585 - KAI3509669.1 Cien5g03149 3149
5 75655079 75658121 - KAI3509670.1 Cien5g03150 3150
5 75673961 75677020 - KAI3509671.1 Cien5g03151 3151
5 75685208 75687172 - KAI3509672.1 Cien5g03152 3152
5 75691043 75696426 + KAI3509673.1 Cien5g03153 3153
3 341528190 341532526 + D.indicum_Contig290_G00001.t1 Cind3g02777 2777
3 341515916 341522460 - D.indicum_Contig290_G00002.t1 Cind3g02778 2778
3 341508493 341511715 - D.indicum_Contig290_G00003.t1 Cind3g02779 2779
3 341788937 341793372 + D.indicum_Contig356_G00005.t1 Cind3g03513 3513
3 341794316 341797270 - D.indicum_Contig356_G00006.t1 Cind3g03514 3514
3 341802884 341807484 + D.indicum_Contig356_G00007.t1 Cind3g03515 3515
3 341809865 341819232 + D.indicum_Contig356_G00008.t1 Cind3g03516 3516
4 81208647 81211055 - h2tg000009l_1.g42113.t1 Cobi4g03166 3166
4 81215950 81230529 - h2tg000009l_1.g42112.t1 Cobi4g03167 3167
4 81235395 81237823 + h2tg000009l_1.g42111.t1 Cobi4g03168 3168
4 81250113 81253351 - h2tg000009l_1.g42109.t1 Cobi4g03170 3170
4 81256910 81264168 + h2tg000009l_1.g42108.t1 Cobi4g03171 3171
4 81269499 81273587 + h2tg000009l_1.g42107.t1 Cobi4g03172 3172
7 4718528 4728095 - h1tg000136l.g124428.t1 Dapi7g00236 236
7 4730496 4735548 - h1tg000136l.g124427.t1 Dapi7g00237 237
7 4748077 4752602 + h1tg000136l.g124426.t1 Dapi7g00238 238
7 4758070 4765161 - h1tg000136l.g124424.t1 Dapi7g00240 240
7 4768697 4775177 + h1tg000136l.g124423.t1 Dapi7g00241 241
7 4778252 4783579 + h1tg000136l.g124422.t1 Dapi7g00242 242
16 71509596 71514641 + h1tg000026l.g56847.t1 Dapi16g01894 1894
23 5274316 5278851 - h2tg000284l.g80789.t1 Dapi23g00256 256
23 5292737 5296910 - h2tg000284l.g80788.t1 Dapi23g00257 257
23 5303404 5307951 + h2tg000284l.g80787.t1 Dapi23g00258 258
23 5308598 5313122 - h2tg000284l.g80786.t1 Dapi23g00259 259
23 5317607 5319614 - h2tg000284l.g80785.t1 Dapi23g00260 260
23 5328851 5335365 + h2tg000284l.g80784.t1 Dapi23g00261 261
23 5339245 5341676 + h2tg000284l.g80783.t1 Dapi23g00262 262
3 31695700 31700280 - XM_043764721.1 Ecan3g02086 2086
3 31703958 31709621 - XM_043764810.1 Ecan3g02087 2087
3 31711279 31714641 + XM_043766041.1 Ecan3g02088 2088
3 31729689 31736665 - XM_043765599.1 Ecan3g02092 2092
3 31740758 31743646 - XM_043765319.1 Ecan3g02093 2093
3 31747195 31748331 + XM_043765026.1 Ecan3g02094 2094
3 31755337 31757926 + XM_043765955.1 Ecan3g02095 2095
6 50831514 50837493 - evm.model.ctg503.10 Enbr6g01480 1480
6 50848556 50850962 + evm.model.ctg503.12 Enbr6g01481 1481
6 50852585 50857658 - evm.model.ctg503.13 Enbr6g01482 1482
6 50875751 50878187 - evm.model.ctg503.14 Enbr6g01483 1483
6 50935038 50953242 + evm.model.ctg503.16 Enbr6g01485 1485
6 50958176 50960505 + evm.model.ctg503.18 Enbr6g01486 1486
1 4783295 4786556 - FliAMIRv0_Chr01g0002341 Fli1g00239 239
1 4814256 4816366 + FliAMIRv0_Chr01g0002361 Fli1g00241 241
1 4816981 4817620 - FliAMIRv0_Chr01g0002371 Fli1g00242 242
1 4826801 4829344 - FliAMIRv0_Chr01g0002381 Fli1g00243 243
1 4832045 4838838 + FliAMIRv0_Chr01g0002391 Fli1g00244 244
1 4861726 4863649 + FliAMIRv0_Chr01g0002401 Fli1g00245 245
11 79247113 79249214 - FraAMIRv0_Chr11g0225791 Fra11g02557 2557
11 79253861 79260629 - FraAMIRv0_Chr11g0225811 Fra11g02559 2559
11 79263275 79265596 + FraAMIRv0_Chr11g0225821 Fra11g02560 2560
11 79270696 79275552 + FraAMIRv0_Chr11g0225831 Fra11g02561 2561
11 79276186 79278405 - FraAMIRv0_Chr11g0225841 Fra11g02562 2562
11 79280203 79283476 + FraAMIRv0_Chr11g0225851 Fra11g02563 2563
12 32092572 32094886 - FroAMIRv0_Chr12g0219731 Fro12g02425 2425
12 32100183 32106280 - FroAMIRv0_Chr12g0219751 Fro12g02427 2427
12 32113647 32116067 + FroAMIRv0_Chr12g0219761 Fro12g02428 2428
12 32121411 32126385 + FroAMIRv0_Chr12g0219771 Fro12g02429 2429
12 32127049 32129489 - FroAMIRv0_Chr12g0219781 Fro12g02430 2430
12 32134353 32138409 + FroAMIRv0_Chr12g0219791 Fro12g02431 2431
2 2006398 2009745 - FsoAMIRv0_Chr02g0029611 Fso2g00142 142
2 2034047 2035602 + FsoAMIRv0_Chr02g0029641 Fso2g00145 145
4 121044580 121046669 - FtrAMIRv0_Chr04g0131511 Ftr4g03717 3717
4 121051606 121052472 - FtrAMIRv0_Chr04g0131541 Ftr4g03720 3720
4 121065718 121068023 + FtrAMIRv0_Chr04g0131551 Ftr4g03721 3721
4 121075676 121077893 + FtrAMIRv0_Chr04g0131571 Ftr4g03723 3723
4 121078629 121081192 - FtrAMIRv0_Chr04g0131581 Ftr4g03724 3724
4 121082326 121085581 + FtrAMIRv0_Chr04g0131591 Ftr4g03725 3725
3 55167877 55173088 - GcoAMIRv0_Chr03g0165971 Glco3g00968 968
3 55217003 55221862 - GcoAMIRv0_Chr03g0165981 Glco3g00969 969
3 55222869 55226585 + GcoAMIRv0_Chr03g0165991 Glco3g00970 970
3 55227156 55231107 - GcoAMIRv0_Chr03g0166001 Glco3g00971 971
3 55572684 55575305 - GcoAMIRv0_Chr03g0166091 Glco3g00980 980
3 55656717 55664239 + GcoAMIRv0_Chr03g0166101 Glco3g00981 981
3 55674795 55678932 + GcoAMIRv0_Chr03g0166111 Glco3g00982 982
4 204043621 204051076 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr04g0189571 Hean4g04336 4336
11 13882157 13886289 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0473871 Hean11g00682 682
11 13891988 13899616 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0473881 Hean11g00683 683
11 13903058 13907303 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0473891 Hean11g00684 684
11 13907656 13910818 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0473901 Hean11g00685 685
11 14030306 14040451 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0473911 Hean11g00686 686
11 14051569 14054720 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0473921 Hean11g00687 687
10 9876350 9881117 - >Htub.h1tg000798l.g447.t1 Hetu10g00243 243
11 7786528 7791799 - >Htub.h1tg000030l.g285.t1 Hetu11g00226 226
12 8194389 8199156 - >Htub.h1tg000613l.g259.t1 Hetu12g00224 224
31 15980518 15983550 - >Htub.h1tg001140l.g334.t1 Hetu31g00473 473
31 15995845 16001662 - >Htub.h1tg001140l.g333.t1 Hetu31g00474 474
31 16005967 16008891 + >Htub.h1tg001140l.g332.t1 Hetu31g00475 475
31 16011988 16013693 - >Htub.h1tg001140l.g331.t1 Hetu31g00476 476
31 16176790 16185319 + >Htub.h1tg001140l.g330.t1 Hetu31g00477 477
31 16190684 16193510 + >Htub.h1tg001140l.g329.t1 Hetu31g00478 478
32 20915237 20918174 - >Htub.h1tg001632l.g247.t1 Hetu32g00538 538
32 20943711 20949523 - >Htub.h1tg001632l.g248.t1 Hetu32g00539 539
32 21112826 21120667 + >Htub.h1tg001952l.g225.t1 Hetu32g00540 540
32 21124304 21127130 + >Htub.h1tg001952l.g224.t1 Hetu32g00541 541
33 21056652 21060836 - >Htub.h1tg000986l.g442.t1 Hetu33g00633 633
33 21077424 21081635 - >Htub.h1tg000986l.g440.t1 Hetu33g00635 635
33 21107013 21110285 + >Htub.h1tg000986l.g439.t1 Hetu33g00636 636
33 21112849 21114554 - >Htub.h1tg000986l.g438.t1 Hetu33g00637 637
33 21289756 21297945 + >Htub.h1tg000986l.g437.t1 Hetu33g00638 638
33 21302074 21304855 + >Htub.h1tg000986l.g436.t1 Hetu33g00639 639
7 129855653 129858275 - CAI9294908.1 Laca7g02721 2721
7 129862945 129865724 - CAI9294909.1 Laca7g02722 2722
7 129866625 129868833 + CAI9294910.1 Laca7g02723 2723
7 129872389 129876851 - CAI9294911.1 Laca7g02724 2724
7 129912075 129914480 - CAI9294912.1 Laca7g02725 2725
7 129934185 129939372 + CAI9294913.1 Laca7g02726 2726
7 129944992 129947215 + CAI9294914.1 Laca7g02727 2727
1 2122614 2126474 - LmiAMIRv0_Chr01g0002481 Lomi1g00248 248
1 2127567 2129597 + LmiAMIRv0_Chr01g0002491 Lomi1g00249 249
1 2134889 2139086 - LmiAMIRv0_Chr01g0002511 Lomi1g00251 251
1 2158303 2160200 - LmiAMIRv0_Chr01g0002531 Lomi1g00253 253
1 2163864 2165932 + LmiAMIRv0_Chr01g0002541 Lomi1g00254 254
2 49357740 49359779 - LmiAMIRv0_Chr02g0089391 Lomi2g04406 4406
2 49368265 49370558 + LmiAMIRv0_Chr02g0089401 Lomi2g04407 4407
2 49383567 49385592 - LmiAMIRv0_Chr02g0089431 Lomi2g04410 4410
2 49390950 49394869 + LmiAMIRv0_Chr02g0089441 Lomi2g04411 4411
7 177599032 177601690 - >KAJ0196079.1 Lssa7g03349 3349
7 177638130 177641271 - >KAJ0194637.1 Lssa7g03350 3350
7 177645152 177647025 + >KAJ0196130.1 Lssa7g03351 3351
7 177651133 177655559 - >KAJ0197610.1 Lssa7g03352 3352
7 177703755 177706279 - >KAJ0195076.1 Lssa7g03353 3353
7 177710469 177717144 + >KAJ0196574.1 Lssa7g03354 3354
7 177722889 177725073 + >KAJ0198044.1 Lssa7g03355 3355
9 49987208 50025664 - KAD5318191.1 Mimi9g01456 1456
17 9581284 9585042 - KAD3066650.1 Mimi17g00328 328
17 9617002 9617976 + KAD3066651.1 Mimi17g00329 329
17 9706298 9708943 - KAD3066653.1 Mimi17g00331 331
17 9786491 9795379 + KAD3066654.1 Mimi17g00332 332
4 8080476 8084245 - PdyAMIRv0_Chr04g0152381 Pdy4g00430 430
4 8086835 8091214 - PdyAMIRv0_Chr04g0152391 Pdy4g00431 431
4 8097658 8100014 + PdyAMIRv0_Chr04g0152401 Pdy4g00432 432
4 8104525 8108447 - PdyAMIRv0_Chr04g0152411 Pdy4g00433 433
4 8144382 8146478 - PdyAMIRv0_Chr04g0152421 Pdy4g00434 434
4 8161886 8168137 + PdyAMIRv0_Chr04g0152441 Pdy4g00436 436
4 8179980 8181665 + PdyAMIRv0_Chr04g0152451 Pdy4g00437 437
1 154190262 154192306 - PluAMIRv0_Chr01g0213801 Pslu1g21475 21475
1 154225983 154228206 + PluAMIRv0_Chr01g0213811 Pslu1g21476 21476
1 154262146 154266315 + PluAMIRv0_Chr01g0213861 Pslu1g21481 21481
1 154278816 154280633 - PluAMIRv0_Chr01g0213911 Pslu1g21486 21486
1 154285379 154288869 + PluAMIRv0_Chr01g0213921 Pslu1g21487 21487
1 154289995 154293433 + PluAMIRv0_Chr01g0213931 Pslu1g21488 21488
12 11742957 11746374 - SinAMIRv0_Chr12g0360831 Sain12g00519 519
12 11756189 11768108 - SinAMIRv0_Chr12g0360851 Sain12g00521 521
12 11774951 11777217 + SinAMIRv0_Chr12g0360861 Sain12g00522 522
12 11794502 11799282 + SinAMIRv0_Chr12g0360881 Sain12g00524 524
12 11800771 11803664 - SinAMIRv0_Chr12g0360891 Sain12g00525 525
12 11824813 11831470 + SinAMIRv0_Chr12g0360901 Sain12g00526 526
7 1860389 1862557 - KAI3809678.1 Smso7g00098 98
7 1865285 1872524 - KAI3809679.1 Smso7g00099 99
7 1880227 1884686 + KAI3809680.1 Smso7g00100 100
7 1901793 1904846 - KAI3809685.1 Smso7g00105 105
7 1907058 1910978 + KAI3809686.1 Smso7g00106 106
7 1920689 1924492 + KAI3809687.1 Smso7g00107 107
26 36172621 36177745 + KAI3695354.1 Smso26g01869 1869
29 2220363 2222576 - KAI3675126.1 Smso29g00132 132
29 2225678 2232656 - KAI3675127.1 Smso29g00133 133
29 2237843 2250429 + KAI3675128.1 Smso29g00134 134
29 2254923 2258818 + KAI3675130.1 Smso29g00136 136
29 2275778 2279550 + KAI3675133.1 Smso29g00139 139
5 30854893 30857681 - transfrag32029.t01 Soca5g02781 2781
5 30860055 30865430 - transfrag32028.t02 Soca5g02783 2783
5 30883091 30887695 + transfrag32027.t01 Soca5g02784 2784
5 30908952 30915359 + asmbl_5676.p1 Soca5g02785 2785
5 30920635 30923892 - transfrag32024.t01 Soca5g02787 2787
5 30925410 30937155 + transfrag32023.t01 Soca5g02789 2789
5 30941297 30946451 + asmbl_5675.p1 Soca5g02790 2790
6 8262596 8267093 - Streb.6G003080.1 Stre6g00308 308
6 8268839 8271133 + Streb.6G003090.1 Stre6g00309 309
6 8271248 8277599 - Streb.6G003100.1 Stre6g00310 310
6 8280326 8283634 - Streb.6G003110.1 Stre6g00311 311
6 8315003 8321916 + Streb.6G003120.1 Stre6g00312 312
6 8324866 8327006 + Streb.6G003130.1 Stre6g00313 313
1 50805050 50810962 - >KAK1439750.1 Taer1g05570 5570
1 50813812 50816130 + >KAK1439751.1 Taer1g05571 5571
1 50820584 50825709 + >KAK1439752.1 Taer1g05572 5572
1 50826282 50828667 - >KAK1439753.1 Taer1g05573 5573
1 50838796 50841676 + >KAK1439755.1 Taer1g05575 5575
4 92437311 92440387 - TkA04G367760.2 Tako4g04088 4088
4 57468986 57474682 - TbA04G025150.1 Tamo4g03003 3003
4 57476632 57479942 + TbA04G025140.1 Tamo4g03004 3004
4 57485431 57490839 + TbA04G025120.1 Tamo4g03006 3006
4 57502863 57504952 - TbA04G025080.1 Tamo4g03007 3007
4 57505935 57509672 + TbA04G025070.1 Tamo4g03008 3008
       
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