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AGRP

Asteraceae Genomic Research Platform

Gene Search

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Example:

Hierarchical alignments with the Arctium lappa genome as reference

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Asteraceae genomes. We used Arctium lappa as a reference, and by comparing homologous gene locus maps and Ks values between Arctium lappa and other Asteraceae, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We constructed a 74×31,441 macro-matrices.


Select Armi_1 Sain_1 Ceso_1 Cati_1 Ccar_1 Cien_1 Cich_1 Lssa_1 Laca_1 Tako_1 Tamo_1 Pslu_1 Lomi_1 Lomi_2 Enbr_1 Ecan_1 Soca_1 Glco_1 Artr_1 Aary_1 Aary_2 Aann_1 Chma_1 Chmo_1 Chmo_2 Chmo_3 Chla_1 Chna_1 Cind_1 Pdy_1 Cobi_1 Hean_1 Bial_1 Bial_2 Dapi_1 Dapi_2 Hetu_1 Hetu_2 Hetu_3 Amtr_1 Smso_1 Smso_2 Taer_1 Fro_1 Fso_1 Ftr_1 Fra_1 Fli_1 Stre_1 Mimi_1 Cobi_2 Hean_2 Bial_3 Bial_4 Dapi_3 Dapi_4 Hetu_4 Hetu_5 Hetu_6 Amtr_2 Smso_3 Smso_4 Taer_2 Fro_2 Fso_2 Ftr_2 Fra_2 Fli_2 Stre_2 Mimi_2
. Sain12g00339 . Cati3g00406 Ccar2g02089 Cien5g03304 Cich4g04596 Lssa7g03555 Laca7g02885 . Tamo4g02726 Pslu1g21121 . Lomi2g04312 Enbr6g00724 Ecan3g02227 Soca5g02387 Glco3g01255 Artr3g11336 . Aary13g03250 Aann4g01030 . . . . . . . Pdy4g00592 . . . . . . . . . . . . . . . . . . . . Cobi4g03025 Hean11g00949 Bial4g03292 . Dapi7g00383 Dapi23g00411 Hetu32g00766 Hetu31g00711 Hetu33g00831 Amtr02g06841 Smso7g00010 Smso29g00014 Taer1g05428 Fro12g02308 Fso2g00300 Ftr4g03620 Fra11g02470 Fli1g00340 Stre6g00485 Mimi17g00495
Armi1g00375 Sain12g00340 Ceso2g03424 . Ccar2g02088 Cien5g03303 Cich4g04594 Lssa7g03554 Laca7g02884 . Tamo4g02728 . Lomi1g00346 Lomi2g04313 . Ecan3g02226 . Glco3g01253 . . Aary13g03252 Aann4g01033 . . . . . . . Pdy4g00591 Cobi6g01397 Hean15g03999 . Bial12g02330 . . . Hetu16g02537 Hetu18g02700 Amtr02g04125 . . . . . . . . . Mimi9g01347 . . . . . . . . . . . . . . . . . . . .
. Sain12g00341 . Cati3g00409 Ccar2g02087 . . . . . . Pslu1g21125 . Lomi2g04314 . Ecan3g02224 Soca5g02389 . . . . . . Chmo13g00862 Chmo14g00844 Chmo15g00761 Chla6g05829 Chna2g00742 Cind3g05672 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
. Sain12g00342 . Cati3g00410 Ccar2g02086 Cien5g03300 Cich4g04591 Lssa7g03550 Laca7g02881 . Tamo4g02733 Pslu1g21126 . . . Ecan3g02223 Soca5g02391 Glco3g01249 Artr3g11343 Aary5g02769 . Aann4g01035 . Chmo13g00861 Chmo14g00842 Chmo15g00760 Chla6g05830 Chna2g00741 Cind3g05673 Pdy4g00588 . . . . . . . . . . . . . . . . . . . . Cobi4g03027 Hean11g00946 Bial4g03294 . Dapi7g00380 Dapi23g00406 Hetu32g00763 Hetu31g00710 Hetu33g00829 Amtr02g06852 Smso7g00012 Smso29g00016 Taer1g05431 Fro12g02310 Fso2g00297 Ftr4g03622 Fra11g02472 Fli1g00336 Stre6g00482 Mimi17g00491
. Sain12g00343 Ceso2g03425 Cati3g00411 Ccar2g02085 Cien5g03299 Cich4g04590 Lssa7g03549 Laca7g02880 . . Pslu1g21127 Lomi1g00344 Lomi2g04315 Enbr6g02098 Ecan3g02222 Soca5g02392 Glco3g01248 Artr3g11344 Aary5g02768 . Aann4g01036 . Chmo13g00860 Chmo14g00841 Chmo15g00759 Chla6g05831 Chna2g00740 Cind3g05674 Pdy4g00587 Cobi6g01395 Hean15g03996 Bial24g02193 Bial12g02332 . . . Hetu16g02538 Hetu18g02705 Amtr02g04124 . Smso13g00318 . . . . . . . Mimi9g01349 . . . . . . . . . . . . . . . . . . . .
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00379 Sain12g00345 Ceso2g03427 Cati3g00413 Ccar2g02083 Cien5g03294 Cich4g04587 Lssa7g03546 . . Tamo4g02740 Pslu1g21130 Lomi1g00342 Lomi2g04320 Enbr6g00737 Ecan3g02220 Soca5g02394 Glco3g01245 Artr3g11350 Aary5g02765 Aary13g03256 Aann4g01039 . Chmo13g00857 Chmo14g00835 Chmo15g00756 Chla6g05837 Chna2g00734 Cind3g05678 Pdy4g00583 . . . . . . . . . . . . . . . . . . . . Cobi4g03029 Hean11g00942 Bial4g03297 . Dapi7g00378 Dapi23g00403 Hetu32g00761 Hetu31g00707 Hetu33g00826 Amtr02g06860 . Smso29g00019 Taer1g05434 Fro12g02312 Fso2g00292 . Fra11g02475 Fli1g00333 Stre6g00478 Mimi17g00482
Armi1g00380 . Ceso2g03428 Cati3g00414 . Cien5g03293 Cich4g04586 Lssa7g03545 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00381 Sain12g00347 Ceso2g03429 Cati3g00416 Ccar2g02082 Cien5g03289 Cich4g04582 Lssa7g03541 . . . Pslu1g21153 Lomi1g00341 Lomi2g04322 Enbr6g00740 Ecan3g02216 Soca5g02396 Glco3g01239 Artr3g11369 Aary5g02762 Aary13g03259 Aann4g01043 . Chmo13g00854 Chmo14g00830 Chmo15g00752 Chla6g05841 Chna2g00731 Cind3g05681 Pdy4g00581 Cobi6g01391 Hean15g03976 Bial24g02196 Bial12g02336 . . . Hetu16g02563 Hetu18g02729 Amtr02g04120 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00385 Sain12g00348 . Cati3g00418 Ccar2g02081 . Cich4g04581 Lssa7g03536 Laca7g02866 Tako4g03820 . Pslu1g21155 Lomi1g00340 Lomi2g04323 Enbr6g00742 Ecan3g02215 Soca5g02401 Glco3g01238 Artr3g11384 Aary5g02761 Aary13g03260 Aann4g01046 . Chmo13g00853 Chmo14g00829 Chmo15g00751 Chla6g05842 Chna2g00729 Cind3g04073 Pdy4g00580 . . . . . . . . . . . . . . . . . . . . Cobi4g03030 Hean11g00939 Bial4g03300 Bial24g02197 Dapi7g00376 Dapi23g00400 Hetu32g00760 Hetu31g00706 Hetu33g00825 Amtr02g06869 . Smso29g00020 . . . . . . Stre6g00477 Mimi17g00480
   
Gene_GFF
Select Chromosome Start End Strand Old_gene Gene Num
4 57300705 57304356 - chr4g0773231 Aann4g01030 1030
4 57397643 57400684 - chr4g0773331 Aann4g01033 1033
4 57536851 57538878 + chr4g0773401 Aann4g01035 1035
4 57539085 57545967 - chr4g0773411 Aann4g01036 1036
4 57672832 57675258 + chr4g0773501 Aann4g01039 1039
4 57769380 57773497 + chr4g0773581 Aann4g01043 1043
4 57884658 57887135 + chr4g0773631 Aann4g01046 1046
5 162855943 162857635 - Aargg5g27610.1 Aary5g02761 2761
5 163066688 163070531 - Aargg5g27620.1 Aary5g02762 2762
5 163183855 163186053 - Aargg5g27650.1 Aary5g02765 2765
5 163579622 163585100 + Aargg5g27680.1 Aary5g02768 2768
5 163585825 163587306 - Aargg5g27690.1 Aary5g02769 2769
13 191388119 191391456 - Aargg13g32500.1 Aary13g03250 3250
13 191613820 191616102 - Aargg13g32520.1 Aary13g03252 3252
13 192063848 192066042 + Aargg13g32560.1 Aary13g03256 3256
13 192250808 192255322 + Aargg13g32590.1 Aary13g03259 3259
13 192452312 192454015 + Aargg13g32600.1 Aary13g03260 3260
2 81879220 81881178 - AtrifAMIRv0_Chr02g0137161 Amtr02g04120 4120
2 81980608 81985366 + AtrifAMIRv0_Chr02g0137201 Amtr02g04124 4124
2 81990094 81991891 + AtrifAMIRv0_Chr02g0137211 Amtr02g04125 4125
2 124170184 124172649 - AtrifAMIRv0_Chr02g0164371 Amtr02g06841 6841
2 124328806 124330344 + AtrifAMIRv0_Chr02g0164481 Amtr02g06852 6852
2 124555347 124557395 + AtrifAMIRv0_Chr02g0164561 Amtr02g06860 6860
2 124712000 124713540 + AtrifAMIRv0_Chr02g0164651 Amtr02g06869 6869
1 6858826 6867628 + AmiAMIRv0_Chr01g0003751 Armi1g00375 375
1 6921402 6924259 + AmiAMIRv0_Chr01g0003791 Armi1g00379 379
1 6928946 6930646 - AmiAMIRv0_Chr01g0003801 Armi1g00380 380
1 6989752 6991996 + AmiAMIRv0_Chr01g0003811 Armi1g00381 381
1 7068504 7069982 + AmiAMIRv0_Chr01g0003851 Armi1g00385 385
3 382719225 382722297 - AtridAMIRv0_Chr03g0420721 Artr3g11336 11336
3 382999167 383000648 + AtridAMIRv0_Chr03g0420791 Artr3g11343 11343
3 383001898 383007659 - AtridAMIRv0_Chr03g0420801 Artr3g11344 11344
3 383392256 383395005 + AtridAMIRv0_Chr03g0420861 Artr3g11350 11350
3 383964841 383967545 + AtridAMIRv0_Chr03g0421051 Artr3g11369 11369
3 384516522 384518235 + AtridAMIRv0_Chr03g0421201 Artr3g11384 11384
4 75357615 75361050 - g43131.t1 Bial4g03292 3292
4 75461404 75462915 + g43133.t1 Bial4g03294 3294
4 75503337 75505156 + g43136.t1 Bial4g03297 3297
4 75563801 75565604 + g43139.t1 Bial4g03300 3300
12 53567299 53570614 - g35529.t1 Bial12g02330 2330
12 53618970 53623350 - g35531.t1 Bial12g02332 2332
12 53651044 53653043 + g35535.t1 Bial12g02336 2336
24 52490889 52495269 - g67859.t1 Bial24g02193 2193
24 52522916 52524948 + g67862.t1 Bial24g02196 2196
24 52529643 52531734 + g67863.t1 Bial24g02197 2197
3 3381623 3385106 - CtAH03T0028600.1 Cati3g00406 406
3 3411778 3412488 + CtAH03T0028900.1 Cati3g00409 409
3 3421528 3423072 + CtAH03T0029000.1 Cati3g00410 410
3 3423337 3431725 - CtAH03T0029100.1 Cati3g00411 411
3 3472903 3479828 + CtAH03T0029300.1 Cati3g00413 413
3 3480890 3483084 - CtAH03T0029400.1 Cati3g00414 414
3 3517941 3521475 + CtAH03T0029500.2 Cati3g00416 416
3 3542902 3545062 + CtAH03T0029600.1 Cati3g00418 418
2 68015682 68017734 - gnl|WGS:LEKV|Ccrd_011129.mRNA.1_mrna Ccar2g02081 2081
2 68032112 68034347 - gnl|WGS:LEKV|Ccrd_011130.mRNA.1_mrna Ccar2g02082 2082
2 68050161 68056683 - gnl|WGS:LEKV|Ccrd_011131.mRNA.1_mrna Ccar2g02083 2083
2 68080329 68090033 + gnl|WGS:LEKV|Ccrd_011133.mRNA.1_mrna Ccar2g02085 2085
2 68089586 68092072 - gnl|WGS:LEKV|Ccrd_011134.mRNA.1_mrna Ccar2g02086 2086
2 68103393 68104118 + gnl|WGS:LEKV|Ccrd_011135.mRNA.1_mrna Ccar2g02087 2087
2 68115936 68124032 + gnl|WGS:LEKV|Ccrd_011136.mRNA.1_mrna Ccar2g02088 2088
2 68124351 68128059 + gnl|WGS:LEKV|Ccrd_011137.mRNA.1_mrna Ccar2g02089 2089
2 84767900 84774008 - >KAJ9562844.1 Ceso2g03424 3424
2 84809960 84818938 - >KAJ9562792.1 Ceso2g03425 3425
2 84860900 84864270 + >KAJ9562789.1 Ceso2g03427 3427
2 84866499 84868170 - >KAJ9562791.1 Ceso2g03428 3428
2 84889469 84891870 + >KAJ9562772.1 Ceso2g03429 3429
6 231581431 231582018 - ClaG1_Chr06g0430761 Chla6g05829 5829
6 231743549 231745249 + ClaG1_Chr06g0430771 Chla6g05830 5830
6 231745944 231751578 - ClaG1_Chr06g0430781 Chla6g05831 5831
6 232179427 232188238 + ClaG1_Chr06g0430841 Chla6g05837 5837
6 232426308 232429619 + ClaG1_Chr06g0430881 Chla6g05841 5841
6 232578787 232581011 + ClaG1_Chr06g0430891 Chla6g05842 5842
13 43595093 43596716 - evm.model.scaffold_461.368 Chmo13g00853 853
13 43776069 43779862 - evm.model.scaffold_461.375 Chmo13g00854 854
13 44076234 44078950 - evm.model.scaffold_461.380 Chmo13g00857 857
13 44374478 44380637 + evm.model.scaffold_461.392 Chmo13g00860 860
13 44381343 44382758 - evm.model.scaffold_461.393 Chmo13g00861 861
13 44606805 44612306 + evm.model.scaffold_461.402 Chmo13g00862 862
14 39904372 39906490 - evm.model.scaffold_645.86 Chmo14g00829 829
14 40119612 40123499 - evm.model.scaffold_645.78 Chmo14g00830 830
14 40477822 40480541 - evm.model.scaffold_645.62 Chmo14g00835 835
14 40687557 40693278 + evm.model.scaffold_645.46 Chmo14g00841 841
14 40694260 40695447 - evm.model.scaffold_645.45 Chmo14g00842 842
14 40862985 40863176 + evm.model.scaffold_645.39 Chmo14g00844 844
15 42782675 42784888 - evm.model.scaffold_1806.645 Chmo15g00751 751
15 42994658 42998542 - evm.model.scaffold_1806.631 Chmo15g00752 752
15 43381147 43383467 - evm.model.scaffold_1806.616 Chmo15g00756 756
15 43702179 43708234 + evm.model.scaffold_1806.602 Chmo15g00759 759
15 43708960 43710638 - evm.model.scaffold_1806.601 Chmo15g00760 760
15 43883298 43884240 + evm.model.scaffold_1806.598 Chmo15g00761 761
2 55557316 55559457 - Cn0130230 Chna2g00729 729
2 55726558 55731012 - Cn0130290 Chna2g00731 731
2 56124443 56125408 - Cn0130320 Chna2g00734 734
2 56624454 56630546 + Cn0026640 Chna2g00740 740
2 56631358 56632545 - Cn0026630 Chna2g00741 741
2 56858514 56859110 + Cn0026590 Chna2g00742 742
4 132770052 132771519 - KAI3753716.1 Cich4g04581 4581
4 132799891 132801188 - KAI3753717.1 Cich4g04582 4582
4 132901244 132902114 + KAI3753721.1 Cich4g04586 4586
4 132930312 132931683 - KAI3753722.1 Cich4g04587 4587
4 133039155 133043235 + KAI3753725.1 Cich4g04590 4590
4 133046046 133047656 - KAI3753726.1 Cich4g04591 4591
4 133142731 133143848 + KAI3753729.1 Cich4g04594 4594
4 133148196 133149787 + KAI3753731.1 Cich4g04596 4596
5 78562748 78565522 - KAI3509809.1 Cien5g03289 3289
5 78617352 78618222 + KAI3509813.1 Cien5g03293 3293
5 78628210 78629575 - KAI3509814.1 Cien5g03294 3294
5 78685356 78694896 + KAI3509819.1 Cien5g03299 3299
5 78696868 78698478 - KAI3509820.1 Cien5g03300 3300
5 78747624 78748741 + KAI3509823.1 Cien5g03303 3303
5 78752973 78754608 + KAI3509824.1 Cien5g03304 3304
3 325288473 325290089 + D.indicum_Contig463_G00026.t1 Cind3g04073 4073
3 324144948 324145541 - D.indicum_Contig84_G00104.t1 Cind3g05672 5672
3 324278926 324284262 + D.indicum_Contig84_G00105.t1 Cind3g05673 5673
3 324285230 324291022 - D.indicum_Contig84_G00106.t1 Cind3g05674 5674
3 324691206 324693382 + D.indicum_Contig84_G00110.t1 Cind3g05678 5678
3 324964717 324967222 + D.indicum_Contig84_G00113.t1 Cind3g05681 5681
4 79143736 79147892 - h2tg000009l_1.g42254.t1 Cobi4g03025 3025
4 79175638 79177119 + h2tg000009l_1.g42252.t1 Cobi4g03027 3027
4 79202931 79217443 + h2tg000009l_1.g42250.t1 Cobi4g03029 3029
4 79232949 79234989 + h2tg000009l_1.g42249.t1 Cobi4g03030 3030
6 11299741 11301513 - h2tg000021l_1.g11285.t1 Cobi6g01391 1391
6 11327914 11332186 + h2tg000021l_1.g11281.t1 Cobi6g01395 1395
6 11343779 11345162 + h2tg000021l_1.g11279.t1 Cobi6g01397 1397
7 8211791 8213211 - h1tg000030l.g76966.t1 Dapi7g00376 376
7 8250618 8252849 - h1tg000030l.g76968.t1 Dapi7g00378 378
7 8360722 8362206 - h1tg000030l.g76970.t1 Dapi7g00380 380
7 8441841 8444152 + h1tg000030l.g76973.t1 Dapi7g00383 383
23 8923765 8925154 - h2tg000233l.g74364.t1 Dapi23g00400 400
23 8969757 8971659 - h2tg000233l.g74367.t1 Dapi23g00403 403
23 9088998 9090482 - h2tg000233l.g74370.t1 Dapi23g00406 406
23 9166869 9169242 + h2tg000233l.g74375.t1 Dapi23g00411 411
3 32996350 32998746 - XM_043764962.1 Ecan3g02215 2215
3 33043222 33046965 - XM_043765636.1 Ecan3g02216 2216
3 33084917 33087453 - XM_043765161.1 Ecan3g02220 2220
3 33117073 33121947 + XM_043764545.1 Ecan3g02222 2222
3 33122545 33124220 - XM_043766452.1 Ecan3g02223 2223
3 33138130 33139088 + XM_043766080.1 Ecan3g02224 2224
3 33167518 33171922 + XM_043762796.1 Ecan3g02226 2226
3 33175221 33178490 + XM_043762794.1 Ecan3g02227 2227
6 26183604 26186404 - evm.model.ctg4616.1 Enbr6g00724 724
6 26381800 26384036 + evm.model.ctg82.10 Enbr6g00737 737
6 26444637 26446764 + evm.model.ctg82.5 Enbr6g00740 740
6 26489159 26491358 + evm.model.ctg82.3 Enbr6g00742 742
6 74403824 74406039 - evm.model.ctg9313.3 Enbr6g02098 2098
1 6722401 6723962 - FliAMIRv0_Chr01g0003281 Fli1g00333 333
1 6826831 6827547 - FliAMIRv0_Chr01g0003311 Fli1g00336 336
1 6879353 6881280 + FliAMIRv0_Chr01g0003351 Fli1g00340 340
11 78388992 78393841 - FraAMIRv0_Chr11g0224921 Fra11g02470 2470
11 78420432 78421982 + FraAMIRv0_Chr11g0224941 Fra11g02472 2472
11 78451050 78452581 + FraAMIRv0_Chr11g0224971 Fra11g02475 2475
12 30549533 30551462 - FroAMIRv0_Chr12g0218561 Fro12g02308 2308
12 30578541 30580091 + FroAMIRv0_Chr12g0218581 Fro12g02310 2310
12 30611076 30612573 + FroAMIRv0_Chr12g0218601 Fro12g02312 2312
2 4060402 4061311 - FsoAMIRv0_Chr02g0031111 Fso2g00292 292
2 4109627 4111177 - FsoAMIRv0_Chr02g0031161 Fso2g00297 297
2 4168237 4170166 + FsoAMIRv0_Chr02g0031191 Fso2g00300 300
4 119815692 119817620 - FtrAMIRv0_Chr04g0130541 Ftr4g03620 3620
4 119861000 119862550 + FtrAMIRv0_Chr04g0130561 Ftr4g03622 3622
3 77103930 77105535 - GcoAMIRv0_Chr03g0168671 Glco3g01238 1238
3 77406143 77408766 - GcoAMIRv0_Chr03g0168681 Glco3g01239 1239
3 77752096 77754387 - GcoAMIRv0_Chr03g0168741 Glco3g01245 1245
3 78306512 78312786 + GcoAMIRv0_Chr03g0168771 Glco3g01248 1248
3 78313417 78314907 - GcoAMIRv0_Chr03g0168781 Glco3g01249 1249
3 78538811 78542959 + GcoAMIRv0_Chr03g0168821 Glco3g01253 1253
3 78558310 78561495 + GcoAMIRv0_Chr03g0168841 Glco3g01255 1255
11 23418711 23420958 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0476841 Hean11g00939 939
11 23535993 23538379 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0476911 Hean11g00942 942
11 23753214 23754731 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0476961 Hean11g00946 946
11 23995330 23998636 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0476991 Hean11g00949 949
15 154459080 154463284 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0717031 Hean15g03976 3976
15 155328264 155333368 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0717261 Hean15g03996 3996
15 155427371 155429930 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0717291 Hean15g03999 3999
16 133840436 133842632 - >Htub.h1tg001448l.g3.t1 Hetu16g02537 2537
16 133887336 133891176 - >Htub.h1tg001448l.g4.t1 Hetu16g02538 2538
16 135019265 135021515 + >Htub.h1tg001448l.g29.t1 Hetu16g02563 2563
18 134870188 134872388 - >Htub.h1tg004077l.g272.t1 Hetu18g02700 2700
18 134942012 134947878 - >Htub.h1tg004077l.g267.t1 Hetu18g02705 2705
18 136493429 136495217 + >Htub.h1tg002727l.g121.t1 Hetu18g02729 2729
31 30112329 30114122 - >Htub.h1tg002695l.g127.t1 Hetu31g00706 706
31 30329790 30331908 - >Htub.h1tg004091l.g174.t1 Hetu31g00707 707
31 30595499 30597016 - >Htub.h1tg004091l.g177.t1 Hetu31g00710 710
31 30763516 30765259 + >Htub.h1tg004091l.g178.t1 Hetu31g00711 711
32 33224629 33226231 - >Htub.h1tg002251l.g126.t1 Hetu32g00760 760
32 33325183 33327227 - >Htub.h1tg002251l.g125.t1 Hetu32g00761 761
32 33520743 33522260 - >Htub.h1tg002251l.g123.t1 Hetu32g00763 763
32 33637255 33638984 + >Htub.h1tg002251l.g120.t1 Hetu32g00766 766
33 32895608 32897202 - >Htub.h1tg001856l.g186.t1 Hetu33g00825 825
33 33054828 33056802 - >Htub.h1tg001856l.g185.t1 Hetu33g00826 826
33 33420110 33421627 - >Htub.h1tg001856l.g182.t1 Hetu33g00829 829
33 33535201 33536929 + >Htub.h1tg001856l.g180.t1 Hetu33g00831 831
7 137289729 137291805 - CAI9295054.1 Laca7g02866 2866
7 138014477 138018091 + CAI9295068.1 Laca7g02880 2880
7 138039545 138041122 - CAI9295069.1 Laca7g02881 2881
7 138268377 138269905 + CAI9295072.1 Laca7g02884 2884
7 138270029 138272391 + CAI9295073.1 Laca7g02885 2885
1 2950290 2952035 - LmiAMIRv0_Chr01g0003401 Lomi1g00340 340
1 2957919 2959965 - LmiAMIRv0_Chr01g0003411 Lomi1g00341 341
1 2993504 2995394 - LmiAMIRv0_Chr01g0003421 Lomi1g00342 342
1 3015430 3020442 + LmiAMIRv0_Chr01g0003441 Lomi1g00344 344
1 3044810 3046650 + LmiAMIRv0_Chr01g0003461 Lomi1g00346 346
2 48533209 48535474 - LmiAMIRv0_Chr02g0088451 Lomi2g04312 4312
2 48536288 48538225 - LmiAMIRv0_Chr02g0088461 Lomi2g04313 4313
2 48546647 48547354 - LmiAMIRv0_Chr02g0088471 Lomi2g04314 4314
2 48561511 48566568 - LmiAMIRv0_Chr02g0088481 Lomi2g04315 4315
2 48599192 48601351 + LmiAMIRv0_Chr02g0088531 Lomi2g04320 4320
2 48622777 48624771 + LmiAMIRv0_Chr02g0088551 Lomi2g04322 4322
2 48631157 48632868 + LmiAMIRv0_Chr02g0088561 Lomi2g04323 4323
7 186407447 186409324 - >KAJ0195033.1 Lssa7g03536 3536
7 186643011 186645826 - >KAJ0195241.1 Lssa7g03541 3541
7 186770997 186771815 + >KAJ0195612.1 Lssa7g03545 3545
7 186780549 186782357 - >KAJ0197894.1 Lssa7g03546 3546
7 187505371 187509132 + >KAJ0198350.1 Lssa7g03549 3549
7 187510702 187512279 - >KAJ0195847.1 Lssa7g03550 3550
7 187697345 187698516 + >KAJ0197705.1 Lssa7g03554 3554
7 187703265 187705515 + >KAJ0198149.1 Lssa7g03555 3555
9 40453710 40457400 + KAD5318082.1 Mimi9g01347 1347
9 40611811 40622496 + KAD5318084.1 Mimi9g01349 1349
17 16906203 16907733 - KAD3066802.1 Mimi17g00480 480
17 17038009 17039965 - KAD3066804.1 Mimi17g00482 482
17 17547887 17549434 - KAD3066813.1 Mimi17g00491 491
17 17793250 17798113 + KAD3066817.1 Mimi17g00495 495
4 10804877 10806303 - PdyAMIRv0_Chr04g0153871 Pdy4g00580 580
4 10826502 10828638 - PdyAMIRv0_Chr04g0153881 Pdy4g00581 581
4 10866377 10868432 - PdyAMIRv0_Chr04g0153901 Pdy4g00583 583
4 10963121 10967922 + PdyAMIRv0_Chr04g0153941 Pdy4g00587 587
4 10968398 10969948 - PdyAMIRv0_Chr04g0153951 Pdy4g00588 588
4 11018264 11020337 + PdyAMIRv0_Chr04g0153981 Pdy4g00591 591
4 11022484 11024412 + PdyAMIRv0_Chr04g0153991 Pdy4g00592 592
1 151916704 151919957 - PluAMIRv0_Chr01g0210271 Pslu1g21121 21121
1 151942806 151943501 - PluAMIRv0_Chr01g0210311 Pslu1g21125 21125
1 151952773 151954308 + PluAMIRv0_Chr01g0210321 Pslu1g21126 21126
1 151955524 151960499 - PluAMIRv0_Chr01g0210331 Pslu1g21127 21127
1 151994066 151995978 + PluAMIRv0_Chr01g0210361 Pslu1g21130 21130
1 152090999 152092969 + PluAMIRv0_Chr01g0210591 Pslu1g21153 21153
1 152099002 152101348 + PluAMIRv0_Chr01g0210611 Pslu1g21155 21155
12 6139799 6142563 - SinAMIRv0_Chr12g0359041 Sain12g00339 339
12 6143404 6146582 - SinAMIRv0_Chr12g0359051 Sain12g00340 340
12 6226508 6227188 - SinAMIRv0_Chr12g0359061 Sain12g00341 341
12 6248781 6250358 + SinAMIRv0_Chr12g0359071 Sain12g00342 342
12 6251187 6257748 - SinAMIRv0_Chr12g0359081 Sain12g00343 343
12 6335814 6338623 + SinAMIRv0_Chr12g0359101 Sain12g00345 345
12 6417974 6419884 + SinAMIRv0_Chr12g0359121 Sain12g00347 347
12 6445495 6446972 + SinAMIRv0_Chr12g0359131 Sain12g00348 348
7 84973 86696 + KAI3809590.1 Smso7g00010 10
7 102352 103822 + KAI3809592.1 Smso7g00012 12
13 35711296 35716528 - KAI3786575.1 Smso13g00318 318
29 131463 132908 - KAI3675008.1 Smso29g00014 14
29 228727 230073 + KAI3675010.1 Smso29g00016 16
29 274095 275422 + KAI3675013.1 Smso29g00019 19
29 353496 362868 + KAI3675014.1 Smso29g00020 20
5 25390907 25394193 - asmbl_1927.p1 Soca5g02387 2387
5 25429374 25430096 - augustus16640.t01 Soca5g02389 2389
5 25449829 25451328 + augustus16644.t01 Soca5g02391 2391
5 25452347 25456994 - transfrag11055.t01 Soca5g02392 2392
5 25503076 25505581 + transfrag11057.t01 Soca5g02394 2394
5 25542660 25546672 + asmbl_1995.p1 Soca5g02396 2396
5 25575495 25577743 + transfrag11062.t01 Soca5g02401 2401
6 13190150 13192083 - Streb.6G004770.1 Stre6g00477 477
6 13205320 13207437 - Streb.6G004780.1 Stre6g00478 478
6 13303324 13305036 - Streb.6G004820.1 Stre6g00482 482
6 13388418 13390918 + Streb.6G004850.1 Stre6g00485 485
1 49692675 49694410 - >KAK1439608.1 Taer1g05428 5428
1 49719796 49721298 + >KAK1439611.1 Taer1g05431 5431
1 49749278 49751088 + >KAK1439614.1 Taer1g05434 5434
4 86267397 86269706 + TkA04G341640.1 Tako4g03820 3820
4 51572798 51575181 - TbA04G032440.1 Tamo4g02726 2726
4 51581988 51584003 - TbA04G032420.1 Tamo4g02728 2728
4 51662944 51664293 + TbA04G032320.1 Tamo4g02733 2733
4 51797389 51799430 + TbA04G032120.1 Tamo4g02740 2740
       
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