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AGRP

Asteraceae Genomic Research Platform

Gene Search

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Example:

Hierarchical alignments with the Arctium lappa genome as reference

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Asteraceae genomes. We used Arctium lappa as a reference, and by comparing homologous gene locus maps and Ks values between Arctium lappa and other Asteraceae, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We constructed a 74×31,441 macro-matrices.


Select Armi_1 Sain_1 Ceso_1 Cati_1 Ccar_1 Cien_1 Cich_1 Lssa_1 Laca_1 Tako_1 Tamo_1 Pslu_1 Lomi_1 Lomi_2 Enbr_1 Ecan_1 Soca_1 Glco_1 Artr_1 Aary_1 Aary_2 Aann_1 Chma_1 Chmo_1 Chmo_2 Chmo_3 Chla_1 Chna_1 Cind_1 Pdy_1 Cobi_1 Hean_1 Bial_1 Bial_2 Dapi_1 Dapi_2 Hetu_1 Hetu_2 Hetu_3 Amtr_1 Smso_1 Smso_2 Taer_1 Fro_1 Fso_1 Ftr_1 Fra_1 Fli_1 Stre_1 Mimi_1 Cobi_2 Hean_2 Bial_3 Bial_4 Dapi_3 Dapi_4 Hetu_4 Hetu_5 Hetu_6 Amtr_2 Smso_3 Smso_4 Taer_2 Fro_2 Fso_2 Ftr_2 Fra_2 Fli_2 Stre_2 Mimi_2
Armi1g00386 Sain12g00349 Ceso2g03430 Cati3g00420 Ccar2g02080 Cien5g03280 Cich4g04574 Lssa7g03533 Laca7g02864 Tako4g03822 Tamo4g02760 Pslu1g21157 Lomi1g00339 Lomi2g04325 Enbr6g00743 Ecan3g02214 Soca5g02402 Glco3g01236 Artr3g11389 Aary5g02760 Aary13g03262 Aann4g01049 Chma7g07951 Chmo13g00850 . Chmo15g00749 Chla6g05843 Chna2g00728 Cind3g04072 Pdy4g00578 . Hean15g03974 . . . . . Hetu16g02564 Hetu18g02730 . . Smso13g00342 . . . . . . Stre9g01563 . Cobi4g03034 Hean11g00934 Bial4g03307 Bial16g02678 Dapi7g00374 Dapi23g00397 . . . Amtr02g06884 Smso7g00014 Smso29g00021 Taer1g05441 Fro12g02315 Fso2g00287 Ftr4g03628 Fra11g02477 Fli1g00326 Stre6g00475 Mimi17g00479
Armi1g00387 Sain12g00350 Ceso2g03431 Cati3g00423 . Cien5g03279 Cich4g04573 Lssa7g03528 Laca7g02863 Tako4g03824 Tamo4g02762 Pslu1g21158 Lomi1g00338 Lomi2g04326 Enbr6g00744 Ecan3g02213 Soca5g02403 Glco3g01235 Artr3g11398 . . Aann4g01050 Chma7g07956 Chmo13g00848 Chmo14g00826 Chmo15g00746 Chla6g05845 Chna2g00725 Cind3g04070 Pdy4g00577 . . . . . . . . . . . . . . . . . . . . Cobi4g03035 Hean11g00932 Bial4g03310 Bial16g02679 Dapi7g00373 Dapi23g00396 . . . Amtr02g06893 . . Taer1g05442 Fro12g02317 Fso2g00285 Ftr4g03629 Fra11g02478 Fli1g00325 Stre6g00474 Mimi17g00476
Armi1g00388 Sain12g00352 . Cati3g00425 Ccar2g02079 Cien5g03278 Cich4g04570 Lssa7g03523 Laca7g02861 Tako4g03829 . Pslu1g21159 . Lomi2g04327 . . . . Artr3g11403 Aary5g02757 . Aann4g01054 . Chmo13g00846 Chmo14g00823 . Chla6g05847 Chna2g00721 Cind3g04068 Pdy4g00576 . . . . . . . . . . . . . . . . . . . . Cobi4g03036 Hean11g00931 Bial4g03311 Bial16g02680 Dapi7g00372 Dapi23g00395 Hetu32g00752 Hetu31g00698 Hetu33g00814 Amtr02g06895 . . . . . . . . Stre6g00473 Mimi17g00475
Armi1g00391 Sain12g00353 Ceso2g03432 Cati3g00426 Ccar2g02078 Cien5g03277 Cich4g04569 Lssa7g03521 Laca7g02860 . . Pslu1g21160 Lomi1g00337 Lomi2g04328 Enbr6g00746 Ecan3g02211 Soca5g02404 . Artr3g11404 Aary5g02756 Aary13g03264 Aann4g01055 . . . . . . . Pdy4g00575 . . . . . . . . . . . . . . . . . . . . Cobi4g03037 Hean11g00930 Bial4g03312 Bial16g02681 Dapi7g00371 Dapi23g00394 Hetu32g00750 Hetu31g00696 Hetu33g00812 Amtr02g06896 Smso7g00015 Smso29g00023 Taer1g05445 Fro12g02320 Fso2g00283 . Fra11g02480 Fli1g00323 Stre6g00472 Mimi17g00472
Armi1g00392 Sain12g00355 . Cati3g00427 Ccar2g02077 . . . . . . Pslu1g21161 . Lomi2g04329 . Ecan3g02210 Soca5g02405 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00393 Sain12g00356 Ceso2g03433 Cati3g00429 Ccar2g02076 Cien5g03276 Cich4g04567 Lssa7g03520 Laca7g02859 Tako4g03831 . Pslu1g21165 Lomi1g00336 Lomi2g04330 Enbr6g00747 Ecan3g02208 Soca5g02409 . Artr3g11413 Aary5g02754 Aary13g03267 Aann4g01057 . . . . . . . Pdy4g00572 Cobi6g01388 Hean15g03973 Bial24g02199 Bial12g02339 . . . Hetu16g02566 Hetu18g02735 Amtr02g04118 . . . . . . . . . Mimi9g01425 . . . . . . . . . . . . . . . . . . . .
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00395 Sain12g00358 Ceso2g03434 Cati3g00430 Ccar2g02075 Cien5g03273 Cich4g04564 Lssa7g03515 Laca7g02858 Tako4g03835 Tamo4g02767 . . . . Ecan3g02207 Soca5g02411 . . . . . . . . . . . . Pdy4g00570 Cobi6g01387 Hean15g03967 Bial24g02200 Bial12g02340 . . Hetu17g02434 Hetu16g02580 . Amtr02g04115 . . . . . . . . . . Cobi4g03042 Hean11g00926 Bial4g03316 Bial16g02685 Dapi7g00365 Dapi23g00388 Hetu32g00744 Hetu31g00688 Hetu33g00805 Amtr02g06904 Smso7g00017 Smso29g00025 Taer1g05448 . Fso2g00281 Ftr4g03636 Fra11g02483 Fli1g00321 Stre6g00469 Mimi17g00465
Armi1g00396 Sain12g00359 Ceso2g03435 Cati3g00431 . Cien5g03271 Cich4g04563 Lssa7g03514 Laca7g02857 Tako4g03837 Tamo4g02776 Pslu1g21167 Lomi1g00335 Lomi2g04331 Enbr6g00750 Ecan3g02205 Soca5g02413 Glco3g01227 . Aary5g02751 . Aann4g01060 . Chmo13g00841 . Chmo15g00736 Chla6g05861 Chna2g00720 Cind3g04061 . Cobi6g01386 Hean15g03966 Bial24g02201 Bial12g02341 . . Hetu17g02435 Hetu16g02581 . Amtr02g04114 . . . . . . . . . . Cobi4g03043 Hean11g00925 Bial4g03317 Bial16g02686 Dapi7g00364 Dapi23g00387 Hetu32g00743 Hetu31g00687 Hetu33g00804 Amtr02g06905 Smso7g00019 Smso29g00026 Taer1g05449 . Fso2g00279 Ftr4g03637 Fra11g02484 Fli1g00320 Stre6g00468 .
   
Gene_GFF
Select Chromosome Start End Strand Old_gene Gene Num
4 57939205 57942345 + chr4g0773671 Aann4g01049 1049
4 57974456 57981892 + chr4g0773691 Aann4g01050 1050
4 58104328 58106607 - chr4g0773791 Aann4g01054 1054
4 58240985 58244720 + chr4g0773901 Aann4g01055 1055
4 58547412 58554129 + chr4g0774171 Aann4g01057 1057
4 58649602 58652611 - chr4g0774281 Aann4g01060 1060
5 161910113 161912592 + Aargg5g27510.1 Aary5g02751 2751
5 162007011 162012626 - Aargg5g27540.1 Aary5g02754 2754
5 162357120 162361640 - Aargg5g27560.1 Aary5g02756 2756
5 162549037 162551631 + Aargg5g27570.1 Aary5g02757 2757
5 162719800 162729564 - Aargg5g27600.1 Aary5g02760 2760
13 192724187 192735476 + Aargg13g32620.1 Aary13g03262 3262
13 192987306 192992094 + Aargg13g32640.1 Aary13g03264 3264
13 193441925 193447766 + Aargg13g32670.1 Aary13g03267 3267
2 81784493 81787087 + AtrifAMIRv0_Chr02g0137101 Amtr02g04114 4114
2 81788430 81790474 - AtrifAMIRv0_Chr02g0137111 Amtr02g04115 4115
2 81852408 81860047 - AtrifAMIRv0_Chr02g0137141 Amtr02g04118 4118
2 125143821 125148520 + AtrifAMIRv0_Chr02g0164801 Amtr02g06884 6884
2 125306065 125309268 + AtrifAMIRv0_Chr02g0164891 Amtr02g06893 6893
2 125334770 125337268 - AtrifAMIRv0_Chr02g0164911 Amtr02g06895 6895
2 125403020 125404892 + AtrifAMIRv0_Chr02g0164921 Amtr02g06896 6896
2 125739645 125741833 + AtrifAMIRv0_Chr02g0165001 Amtr02g06904 6904
2 125743857 125747640 - AtrifAMIRv0_Chr02g0165011 Amtr02g06905 6905
1 7097426 7104542 + AmiAMIRv0_Chr01g0003861 Armi1g00386 386
1 7114217 7129018 + AmiAMIRv0_Chr01g0003871 Armi1g00387 387
1 7131605 7133914 - AmiAMIRv0_Chr01g0003881 Armi1g00388 388
1 7168924 7170330 + AmiAMIRv0_Chr01g0003911 Armi1g00391 391
1 7171774 7173021 - AmiAMIRv0_Chr01g0003921 Armi1g00392 392
1 7224253 7258572 + AmiAMIRv0_Chr01g0003931 Armi1g00393 393
1 7326721 7329108 + AmiAMIRv0_Chr01g0003951 Armi1g00395 395
1 7340000 7341821 - AmiAMIRv0_Chr01g0003961 Armi1g00396 396
3 384655963 384668020 + AtridAMIRv0_Chr03g0421251 Artr3g11389 11389
3 384929345 384933500 + AtridAMIRv0_Chr03g0421341 Artr3g11398 11398
3 385183291 385184984 - AtridAMIRv0_Chr03g0421391 Artr3g11403 11403
3 385204207 385208992 + AtridAMIRv0_Chr03g0421401 Artr3g11404 11404
3 385820773 385826947 + AtridAMIRv0_Chr03g0421491 Artr3g11413 11413
4 75668507 75673374 + g43146.t1 Bial4g03307 3307
4 75714289 75716991 + g43149.t1 Bial4g03310 3310
4 75751445 75752996 - g43150.t1 Bial4g03311 3311
4 75772201 75774884 + g43151.t1 Bial4g03312 3312
4 75821103 75823100 + g43155.t1 Bial4g03316 3316
4 75825562 75827842 - g43156.t1 Bial4g03317 3317
12 53669894 53673685 + g35538.t1 Bial12g02339 2339
12 53703004 53705172 + g35539.t1 Bial12g02340 2340
12 53707571 53709186 - g35540.t1 Bial12g02341 2341
16 69371001 69376245 + g127522.t1 Bial16g02678 2678
16 69383610 69389575 + g127521.t1 Bial16g02679 2679
16 69417985 69419536 - g127520.t1 Bial16g02680 2680
16 69438227 69440971 + g127519.t1 Bial16g02681 2681
16 69492006 69494003 + g127515.t1 Bial16g02685 2685
16 69497746 69500606 - g127514.t1 Bial16g02686 2686
24 52541799 52545590 + g67865.t1 Bial24g02199 2199
24 52574901 52577645 + g67866.t1 Bial24g02200 2200
24 52579467 52581082 - g67867.t1 Bial24g02201 2201
3 3548104 3558097 + CtAH03T0029700.2 Cati3g00420 420
3 3573643 3586600 + CtAH03T0029900.1 Cati3g00423 423
3 3585987 3589000 - CtAH03T0030000.1 Cati3g00425 425
3 3597009 3600486 + CtAH03T0030100.1 Cati3g00426 426
3 3600787 3603507 - CtAH03T0030200.1 Cati3g00427 427
3 3620670 3643656 + CtAH03T0030300.1 Cati3g00429 429
3 3651958 3668901 + CtAH03T0030400.1 Cati3g00430 430
3 3672073 3674831 - CtAH03T0030500.1 Cati3g00431 431
2 67899181 67906933 - gnl|WGS:LEKV|Ccrd_011123.mRNA.1_mrna Ccar2g02075 2075
2 67931027 67949262 - gnl|WGS:LEKV|Ccrd_011124.mRNA.1_mrna Ccar2g02076 2076
2 67960251 67961965 + gnl|WGS:LEKV|Ccrd_011125.mRNA.1_mrna Ccar2g02077 2077
2 67962590 67965672 - gnl|WGS:LEKV|Ccrd_011126.mRNA.1_mrna Ccar2g02078 2078
2 67976901 67979315 + gnl|WGS:LEKV|Ccrd_011127.mRNA.1_mrna Ccar2g02079 2079
2 67983050 68007650 - gnl|WGS:LEKV|Ccrd_011128.mRNA.1_mrna Ccar2g02080 2080
2 84919014 84925225 + >KAJ9562770.1 Ceso2g03430 3430
2 84932422 84938019 + >KAJ9562773.1 Ceso2g03431 3431
2 84950774 84952762 + >KAJ9562769.1 Ceso2g03432 3432
2 84965378 84978435 + >KAJ9562771.1 Ceso2g03433 3433
2 85000290 85005779 + >KAJ9562920.1 Ceso2g03434 3434
2 85019651 85021494 - >KAJ9562921.1 Ceso2g03435 3435
6 232738344 232743674 + ClaG1_Chr06g0430901 Chla6g05843 5843
6 232837971 232841924 + ClaG1_Chr06g0430921 Chla6g05845 5845
6 232883485 232885224 - ClaG1_Chr06g0430941 Chla6g05847 5847
6 233857487 233859747 - ClaG1_Chr06g0431081 Chla6g05861 5861
7 271312179 271313440 - CmaNakai_Chr07g0702531 Chma7g07951 7951
7 271411915 271417078 - CmaNakai_Chr07g0702581 Chma7g07956 7956
13 42665351 42667280 + evm.model.scaffold_461.323 Chmo13g00841 841
13 43175037 43176835 + evm.model.scaffold_461.349 Chmo13g00846 846
13 43269210 43273066 - evm.model.scaffold_461.353 Chmo13g00848 848
13 43398130 43403734 - evm.model.scaffold_461.359 Chmo13g00850 850
14 39383932 39385772 + evm.model.scaffold_9832.8 Chmo14g00823 823
14 39539917 39545184 - evm.model.scaffold_9832.17 Chmo14g00826 826
15 41669547 41671519 + evm.model.scaffold_279.3 Chmo15g00736 736
15 42662472 42664520 - evm.model.scaffold_1806.652 Chmo15g00746 746
15 42672487 42677367 - evm.model.scaffold_1806.649 Chmo15g00749 749
2 54815380 54817301 + Cn0651330 Chna2g00720 720
2 54918246 54919974 + Cn1107120 Chna2g00721 721
2 54973058 54977284 - Cn1107170 Chna2g00725 725
2 55359614 55365097 - Cn0130210 Chna2g00728 728
4 132325835 132327435 + KAI3753698.1 Cich4g04563 4563
4 132330405 132332747 - KAI3753699.1 Cich4g04564 4564
4 132510191 132514371 - KAI3753702.1 Cich4g04567 4567
4 132532802 132534310 - KAI3753704.1 Cich4g04569 4569
4 132536594 132537906 + KAI3753705.1 Cich4g04570 4570
4 132597923 132604665 + KAI3753708.1 Cich4g04573 4573
4 132631124 132636203 - KAI3753709.1 Cich4g04574 4574
5 78253948 78256628 + KAI3509791.1 Cien5g03271 3271
5 78258165 78260566 - KAI3509793.1 Cien5g03273 3273
5 78355420 78357765 - KAI3509796.1 Cien5g03276 3276
5 78364527 78365940 - KAI3509797.1 Cien5g03277 3277
5 78368366 78370092 + KAI3509798.1 Cien5g03278 3278
5 78377133 78381007 - KAI3509799.1 Cien5g03279 3279
5 78413865 78416172 + KAI3509800.1 Cien5g03280 3280
3 326484586 326486379 - D.indicum_Contig463_G00014.t1 Cind3g04061 4061
3 325783955 325785681 - D.indicum_Contig463_G00021.t1 Cind3g04068 4068
3 325666716 325670624 + D.indicum_Contig463_G00023.t1 Cind3g04070 4070
3 325484904 325488827 + D.indicum_Contig463_G00025.t1 Cind3g04072 4072
4 79304181 79311308 + h2tg000009l_1.g42245.t1 Cobi4g03034 3034
4 79316786 79321981 + h2tg000009l_1.g42244.t1 Cobi4g03035 3035
4 79327849 79329547 - h2tg000009l_1.g42243.t1 Cobi4g03036 3036
4 79336179 79340720 + h2tg000009l_1.g42242.t1 Cobi4g03037 3037
4 79465111 79467161 + h2tg000009l_1.g42237.t1 Cobi4g03042 3042
4 79468882 79472190 - h2tg000009l_1.g42236.t1 Cobi4g03043 3043
6 11253010 11255802 + h2tg000021l_1.g11290.t1 Cobi6g01386 1386
6 11256752 11259419 - h2tg000021l_1.g11289.t1 Cobi6g01387 1387
6 11274511 11278326 - h2tg000021l_1.g11288.t1 Cobi6g01388 1388
7 7907540 7908892 + h1tg000030l.g76954.t1 Dapi7g00364 364
7 7910463 7912698 - h1tg000030l.g76955.t1 Dapi7g00365 365
7 8133179 8134880 - h1tg000030l.g76961.t1 Dapi7g00371 371
7 8152075 8155914 + h1tg000030l.g76962.t1 Dapi7g00372 372
7 8158673 8163096 - h1tg000030l.g76963.t1 Dapi7g00373 373
7 8182816 8189912 - h1tg000030l.g76964.t1 Dapi7g00374 374
23 8585245 8586592 + h2tg000233l.g74351.t1 Dapi23g00387 387
23 8588316 8590428 - h2tg000233l.g74352.t1 Dapi23g00388 388
23 8786362 8788063 - h2tg000233l.g74358.t1 Dapi23g00394 394
23 8831995 8833267 + h2tg000233l.g74359.t1 Dapi23g00395 395
23 8837866 8842275 - h2tg000233l.g74360.t1 Dapi23g00396 396
23 8861256 8866609 - h2tg000233l.g74361.t1 Dapi23g00397 397
3 32870692 32873474 + XM_043766934.1 Ecan3g02205 2205
3 32875506 32880238 - XM_043763206.1 Ecan3g02207 2207
3 32908197 32913031 - XM_043763533.1 Ecan3g02208 2208
3 32919767 32922332 + XM_043765839.1 Ecan3g02210 2210
3 32925429 32929693 - XM_043766504.1 Ecan3g02211 2211
3 32957136 32960856 - XM_043765329.1 Ecan3g02213 2213
3 32979951 32983929 - XM_043764170.1 Ecan3g02214 2214
6 26512855 26528209 + evm.model.ctg82.1 Enbr6g00743 743
6 26592769 26596312 + evm.model.ctg1038.12 Enbr6g00744 744
6 26633625 26636565 + evm.model.ctg1038.9 Enbr6g00746 746
6 26646151 26651366 + evm.model.ctg1038.7 Enbr6g00747 747
6 26710384 26712434 - evm.model.ctg1038.1 Enbr6g00750 750
1 6588473 6590100 + FliAMIRv0_Chr01g0003151 Fli1g00320 320
1 6593599 6595790 - FliAMIRv0_Chr01g0003161 Fli1g00321 321
1 6619708 6623473 - FliAMIRv0_Chr01g0003181 Fli1g00323 323
1 6653261 6656407 - FliAMIRv0_Chr01g0003201 Fli1g00325 325
1 6670107 6671449 - FliAMIRv0_Chr01g0003211 Fli1g00326 326
11 78466696 78470550 + FraAMIRv0_Chr11g0224991 Fra11g02477 2477
11 78479709 78482848 + FraAMIRv0_Chr11g0225001 Fra11g02478 2478
11 78494734 78496909 + FraAMIRv0_Chr11g0225021 Fra11g02480 2480
11 78510172 78512392 + FraAMIRv0_Chr11g0225051 Fra11g02483 2483
11 78515189 78516713 - FraAMIRv0_Chr11g0225061 Fra11g02484 2484
12 30640415 30644312 + FroAMIRv0_Chr12g0218631 Fro12g02315 2315
12 30655080 30656566 + FroAMIRv0_Chr12g0218651 Fro12g02317 2317
12 30670820 30672796 + FroAMIRv0_Chr12g0218681 Fro12g02320 2320
2 3957671 3959372 + FsoAMIRv0_Chr02g0030981 Fso2g00279 279
2 3964316 3965419 - FsoAMIRv0_Chr02g0031001 Fso2g00281 281
2 3985291 3987939 - FsoAMIRv0_Chr02g0031021 Fso2g00283 283
2 4000577 4003758 - FsoAMIRv0_Chr02g0031041 Fso2g00285 285
2 4020246 4023665 - FsoAMIRv0_Chr02g0031061 Fso2g00287 287
4 119940660 119942397 + FtrAMIRv0_Chr04g0130621 Ftr4g03628 3628
4 119949709 119952888 + FtrAMIRv0_Chr04g0130631 Ftr4g03629 3629
4 120000399 120002597 + FtrAMIRv0_Chr04g0130701 Ftr4g03636 3636
4 120005322 120006925 - FtrAMIRv0_Chr04g0130711 Ftr4g03637 3637
3 75792480 75795875 + GcoAMIRv0_Chr03g0168561 Glco3g01227 1227
3 76860131 76864189 - GcoAMIRv0_Chr03g0168641 Glco3g01235 1235
3 76952863 76957611 - GcoAMIRv0_Chr03g0168651 Glco3g01236 1236
11 22567122 22569006 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0476681 Hean11g00925 925
11 22569632 22573648 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0476691 Hean11g00926 926
11 23004374 23006504 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0476731 Hean11g00930 930
11 23085455 23087199 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0476751 Hean11g00931 931
11 23139642 23145804 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0476761 Hean11g00932 932
11 23194416 23200055 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0476781 Hean11g00934 934
15 153500310 153503023 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0716871 Hean15g03966 3966
15 153503159 153506483 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0716881 Hean15g03967 3967
15 154282167 154287107 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0716971 Hean15g03973 3973
15 154425623 154427403 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0717011 Hean15g03974 3974
16 135050708 135053697 + >Htub.h1tg001448l.g30.t1 Hetu16g02564 2564
16 135600720 135606062 + >Htub.h1tg001448l.g32.t1 Hetu16g02566 2566
16 136559834 136561658 + >Htub.h1tg001448l.g47.t1 Hetu16g02580 2580
16 136565424 136567333 - >Htub.h1tg001448l.g48.t1 Hetu16g02581 2581
17 128524651 128526484 + >Htub.h2tg000657l.g246.t1 Hetu17g02434 2434
17 128528569 128530641 - >Htub.h2tg000657l.g247.t1 Hetu17g02435 2435
18 136514607 136519958 + >Htub.h1tg002727l.g122.t1 Hetu18g02730 2730
18 136762991 136768335 + >Htub.h1tg002727l.g127.t1 Hetu18g02735 2735
31 28790308 28791743 + >Htub.h1tg002695l.g147.t1 Hetu31g00687 687
31 28793313 28795861 - >Htub.h1tg002695l.g146.t1 Hetu31g00688 688
31 29352873 29354777 - >Htub.h1tg002695l.g138.t1 Hetu31g00696 696
31 29471463 29473088 + >Htub.h1tg002695l.g136.t1 Hetu31g00698 698
32 31953817 31955278 + >Htub.h1tg002251l.g143.t1 Hetu32g00743 743
32 31956844 31959399 - >Htub.h1tg002251l.g142.t1 Hetu32g00744 744
32 32504478 32506407 - >Htub.h1tg002251l.g136.t1 Hetu32g00750 750
32 32587773 32589347 + >Htub.h1tg002251l.g134.t1 Hetu32g00752 752
33 31713680 31715189 + >Htub.h1tg001856l.g207.t1 Hetu33g00804 804
33 31716755 31719304 - >Htub.h1tg001856l.g206.t1 Hetu33g00805 805
33 32378297 32380198 - >Htub.h1tg001856l.g199.t1 Hetu33g00812 812
33 32519851 32521862 + >Htub.h1tg001856l.g197.t1 Hetu33g00814 814
7 136844533 136846589 + CAI9295045.1 Laca7g02857 2857
7 136848984 136853055 - CAI9295046.1 Laca7g02858 2858
7 137100328 137103078 - CAI9295047.1 Laca7g02859 2859
7 137103786 137105949 - CAI9295048.1 Laca7g02860 2860
7 137139881 137141839 + CAI9295049.1 Laca7g02861 2861
7 137150804 137155017 - CAI9295051.1 Laca7g02863 2863
7 137230079 137233677 + CAI9295052.1 Laca7g02864 2864
1 2895534 2897287 + LmiAMIRv0_Chr01g0003351 Lomi1g00335 335
1 2905782 2911310 - LmiAMIRv0_Chr01g0003361 Lomi1g00336 336
1 2925621 2927924 - LmiAMIRv0_Chr01g0003371 Lomi1g00337 337
1 2931218 2931640 - LmiAMIRv0_Chr01g0003381 Lomi1g00338 338
1 2934933 2938712 - LmiAMIRv0_Chr01g0003391 Lomi1g00339 339
2 48654804 48658271 + LmiAMIRv0_Chr02g0088581 Lomi2g04325 4325
2 48659482 48661991 + LmiAMIRv0_Chr02g0088591 Lomi2g04326 4326
2 48662779 48664069 - LmiAMIRv0_Chr02g0088601 Lomi2g04327 4327
2 48668235 48670565 + LmiAMIRv0_Chr02g0088611 Lomi2g04328 4328
2 48673354 48674442 - LmiAMIRv0_Chr02g0088621 Lomi2g04329 4329
2 48681516 48686058 + LmiAMIRv0_Chr02g0088631 Lomi2g04330 4330
2 48696514 48698381 - LmiAMIRv0_Chr02g0088641 Lomi2g04331 4331
7 185899421 185901610 + >KAJ0195423.1 Lssa7g03514 3514
7 185903644 185907091 - >KAJ0197930.1 Lssa7g03515 3515
7 186102642 186105302 - >KAJ0196310.1 Lssa7g03520 3520
7 186107827 186109122 - >KAJ0194812.1 Lssa7g03521 3521
7 186167413 186168613 + >KAJ0196669.1 Lssa7g03523 3523
7 186230811 186234305 - >KAJ0196212.1 Lssa7g03528 3528
7 186330369 186334137 + >KAJ0197136.1 Lssa7g03533 3533
9 47613045 47617380 + KAD5318160.1 Mimi9g01425 1425
17 15896401 15898523 - KAD3066787.1 Mimi17g00465 465
17 16643347 16650458 - KAD3066794.1 Mimi17g00472 472
17 16758555 16762342 + KAD3066797.1 Mimi17g00475 475
17 16763667 16768793 - KAD3066798.1 Mimi17g00476 476
17 16864422 16870710 - KAD3066801.1 Mimi17g00479 479
4 10627164 10629408 - PdyAMIRv0_Chr04g0153771 Pdy4g00570 570
4 10677453 10691397 - PdyAMIRv0_Chr04g0153791 Pdy4g00572 572
4 10750083 10751659 - PdyAMIRv0_Chr04g0153821 Pdy4g00575 575
4 10767238 10769173 + PdyAMIRv0_Chr04g0153831 Pdy4g00576 576
4 10775089 10778481 - PdyAMIRv0_Chr04g0153841 Pdy4g00577 577
4 10789012 10792691 - PdyAMIRv0_Chr04g0153851 Pdy4g00578 578
1 152130782 152134291 + PluAMIRv0_Chr01g0210631 Pslu1g21157 21157
1 152135123 152138263 + PluAMIRv0_Chr01g0210641 Pslu1g21158 21158
1 152138603 152139915 - PluAMIRv0_Chr01g0210651 Pslu1g21159 21159
1 152145362 152147659 + PluAMIRv0_Chr01g0210661 Pslu1g21160 21160
1 152151637 152152734 - PluAMIRv0_Chr01g0210671 Pslu1g21161 21161
1 152198004 152202381 + PluAMIRv0_Chr01g0210711 Pslu1g21165 21165
1 152211810 152213623 - PluAMIRv0_Chr01g0210731 Pslu1g21167 21167
12 6476660 6482205 + SinAMIRv0_Chr12g0359141 Sain12g00349 349
12 6505351 6510418 + SinAMIRv0_Chr12g0359151 Sain12g00350 350
12 6550286 6551980 - SinAMIRv0_Chr12g0359171 Sain12g00352 352
12 6577120 6579473 + SinAMIRv0_Chr12g0359181 Sain12g00353 353
12 6580587 6581801 - SinAMIRv0_Chr12g0359191 Sain12g00355 355
12 6632060 6648636 + SinAMIRv0_Chr12g0359201 Sain12g00356 356
12 6755780 6757985 + SinAMIRv0_Chr12g0359221 Sain12g00358 358
12 6764563 6766421 - SinAMIRv0_Chr12g0359231 Sain12g00359 359
7 187703 192550 + KAI3809594.1 Smso7g00014 14
7 199703 201942 + KAI3809595.1 Smso7g00015 15
7 241775 243938 + KAI3809597.1 Smso7g00017 17
7 248917 250417 - KAI3809599.1 Smso7g00019 19
13 43743327 43744785 + KAI3786599.1 Smso13g00342 342
29 375180 378313 + KAI3675015.1 Smso29g00021 21
29 412472 417535 + KAI3675017.1 Smso29g00023 23
29 472943 479393 + KAI3675019.1 Smso29g00025 25
29 481985 483492 - KAI3675020.1 Smso29g00026 26
5 25591985 25598583 + transfrag11063.t01 Soca5g02402 2402
5 25670707 25674410 + augustus16654.t01 Soca5g02403 2403
5 25693730 25697796 + asmbl_1971.p1 Soca5g02404 2404
5 25705151 25707884 - transfrag11066.t01 Soca5g02405 2405
5 25712708 25718084 + augustus16658.t02 Soca5g02409 2409
5 25756997 25761927 + transfrag11068.t01 Soca5g02411 2411
5 25768617 25771476 - asmbl_1928.p1 Soca5g02413 2413
6 12821693 12824548 + Streb.6G004680.1 Stre6g00468 468
6 12826198 12829967 - Streb.6G004690.1 Stre6g00469 469
6 12983360 12987224 - Streb.6G004720.1 Stre6g00472 472
6 13021871 13024712 + Streb.6G004730.1 Stre6g00473 473
6 13026850 13031679 - Streb.6G004740.1 Stre6g00474 474
6 13160693 13168109 - Streb.6G004750.1 Stre6g00475 475
9 27468799 27471798 - Streb.9G015630.1 Stre9g01563 1563
1 49783464 49787041 + >KAK1439621.1 Taer1g05441 5441
1 49793319 49796300 + >KAK1439622.1 Taer1g05442 5442
1 49810685 49812374 + >KAK1439625.1 Taer1g05445 5445
1 49831443 49834209 + >KAK1439628.1 Taer1g05448 5448
1 49835534 49837841 - >KAK1439629.1 Taer1g05449 5449
4 86273781 86278701 - TkA04G341680.1 Tako4g03822 3822
4 86334590 86337596 - TkA04G341960.1 Tako4g03824 3824
4 86420233 86422347 - TkA04G342280.2 Tako4g03829 3829
4 86424875 86430479 + TkA04G342290.2 Tako4g03831 3831
4 86673077 86677266 + TkA04G343120.1 Tako4g03835 3835
4 86677498 86679807 - TkA04G343130.2 Tako4g03837 3837
4 52136861 52149407 - TbA04G031670.1 Tamo4g02760 2760
4 52182811 52189078 - TbA04G031590.1 Tamo4g02762 2762
4 52354782 52358115 + TbA04G031390.1 Tamo4g02767 2767
4 52465025 52466545 - TbA04G031190.1 Tamo4g02776 2776
       
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