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AGRP

Asteraceae Genomic Research Platform

Gene Search

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Example:

Hierarchical alignments with the Arctium lappa genome as reference

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Asteraceae genomes. We used Arctium lappa as a reference, and by comparing homologous gene locus maps and Ks values between Arctium lappa and other Asteraceae, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We constructed a 74×31,441 macro-matrices.


Select Armi_1 Sain_1 Ceso_1 Cati_1 Ccar_1 Cien_1 Cich_1 Lssa_1 Laca_1 Tako_1 Tamo_1 Pslu_1 Lomi_1 Lomi_2 Enbr_1 Ecan_1 Soca_1 Glco_1 Artr_1 Aary_1 Aary_2 Aann_1 Chma_1 Chmo_1 Chmo_2 Chmo_3 Chla_1 Chna_1 Cind_1 Pdy_1 Cobi_1 Hean_1 Bial_1 Bial_2 Dapi_1 Dapi_2 Hetu_1 Hetu_2 Hetu_3 Amtr_1 Smso_1 Smso_2 Taer_1 Fro_1 Fso_1 Ftr_1 Fra_1 Fli_1 Stre_1 Mimi_1 Cobi_2 Hean_2 Bial_3 Bial_4 Dapi_3 Dapi_4 Hetu_4 Hetu_5 Hetu_6 Amtr_2 Smso_3 Smso_4 Taer_2 Fro_2 Fso_2 Ftr_2 Fra_2 Fli_2 Stre_2 Mimi_2
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00398 Sain12g00362 Ceso2g03441 Cati3g00440 Ccar2g02070 Cien5g03269 Cich4g04559 Lssa7g03511 . Tako4g03845 . Pslu1g21169 . Lomi2g04333 Enbr6g00753 Ecan3g02203 Soca5g02418 Glco3g01225 Artr3g11427 Aary5g02749 . Aann4g01064 . Chmo13g00839 . Chmo15g00734 Chla6g05863 Chna2g00702 Cind3g04057 Pdy4g00568 . . . . . . . . . . . . . . . . . . . . Cobi4g03046 Hean11g00922 Bial4g03332 Bial16g02714 Dapi7g00362 Dapi23g00384 Hetu32g00741 Hetu31g00684 Hetu33g00803 Amtr02g06909 Smso7g00021 Smso29g00028 Taer1g05453 . Fso2g00276 Ftr4g03643 Fra11g02486 Fli1g00316 Stre6g00466 Mimi17g00461
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00400 Sain12g00365 Ceso2g03442 Cati3g00442 Ccar2g02069 Cien5g03268 Cich4g04557 Lssa7g03510 Laca7g02854 Tako4g03855 Tamo4g02801 Pslu1g21170 Lomi1g00333 . . Ecan3g02202 Soca5g02420 Glco3g01224 Artr3g11430 Aary5g02748 . Aann4g01065 . Chmo13g00838 . Chmo15g00733 Chla6g05864 Chna2g00699 Cind3g04056 Pdy4g00567 . . . . . . . . . . . . . . . . . . . . . Hean11g00921 . . . . . . . . . . . . . . . . . .
Armi1g00401 Sain12g00366 . Cati3g00444 Ccar2g02068 Cien5g03267 Cich4g04556 Lssa7g03509 Laca7g02853 Tako4g03856 Tamo4g02802 Pslu1g21171 . Lomi2g04334 Enbr6g00755 Ecan3g02200 Soca5g02423 Glco3g01223 Artr3g11431 Aary5g02747 . Aann4g01066 . Chmo13g00837 . Chmo15g00732 Chla6g05866 Chna2g00698 Cind3g04055 Pdy4g00566 Cobi6g01383 Hean15g03963 Bial24g02204 Bial12g02344 . . Hetu17g02440 Hetu16g02584 . Amtr02g04111 . . . . . . . . . . Cobi4g03048 Hean11g00918 Bial4g03335 Bial16g02716 Dapi7g00360 Dapi23g00380 Hetu32g00739 Hetu31g00682 Hetu33g00802 Amtr02g06912 Smso7g00023 Smso29g00030 . . . . . . Stre6g00462 Mimi17g00459
Armi1g00404 Sain12g00369 . Cati3g00445 Ccar2g02067 Cien5g03265 Cich4g04553 Lssa7g03505 Laca7g02851 Tako4g03858 Tamo4g02805 Pslu1g21172 Lomi1g00332 Lomi2g04336 Enbr6g00756 Ecan3g02199 Soca5g02424 Glco3g01219 . . . Aann4g01067 . Chmo13g00836 . Chmo15g00731 Chla6g05892 Chna2g00697 Cind3g04054 Pdy4g00561 Cobi6g01382 Hean15g03961 Bial24g02205 Bial12g02345 . . Hetu17g02442 Hetu16g02588 . Amtr02g04104 . Smso13g00235 . . . . . . Stre9g01569 . Cobi4g03049 Hean11g00916 Bial4g03337 Bial16g02718 Dapi7g00359 Dapi23g00379 Hetu32g00737 Hetu31g00676 Hetu33g00801 Amtr02g06918 Smso7g00024 Smso29g00031 Taer1g05458 . Fso2g00274 . Fra11g02489 Fli1g00313 Stre6g00458 Mimi17g00455
Armi1g00405 Sain12g00370 . Cati3g00446 Ccar2g02066 Cien5g03264 Cich4g04552 Lssa7g03504 Laca7g02850 Tako4g03859 Tamo4g02806 . . . . . . . . . . . . . . . . Chna2g00695 Cind3g04052 Pdy4g00559 . . . . . . . . . . . . . . . . . . . . Cobi4g03050 Hean11g00915 Bial4g03338 Bial16g02719 Dapi7g00358 Dapi23g00378 . . . Amtr02g06919 Smso7g00025 Smso29g00032 Taer1g05459 . . Ftr4g03646 Fra11g02490 Fli1g00312 Stre6g00457 .
Armi1g00406 Sain12g00371 . Cati3g00447 Ccar2g02065 Cien5g03263 Cich4g04551 Lssa7g03503 Laca7g02849 Tako4g03862 Tamo4g02807 Pslu1g21179 Lomi1g00331 Lomi2g04337 . Ecan3g02197 Soca5g02425 . Artr3g11454 . . Aann4g01069 Chma7g02523 Chmo13g00831 . Chmo15g00728 . Chna2g00694 Cind3g04051 Pdy4g00558 Cobi6g01381 Hean15g03959 Bial24g02206 Bial12g02347 . . . . . Amtr02g04103 . Smso13g00233 . . . . . . Stre9g01570 . Cobi4g03051 Hean11g00914 Bial4g03339 Bial16g02720 . . . . . . Smso7g00026 . Taer1g05460 . Fso2g00273 Ftr4g03647 Fra11g02491 Fli1g00311 Stre6g00456 Mimi17g00454
Armi1g00407 Sain12g00373 . Cati3g00448 Ccar2g02064 Cien5g03262 Cich4g04550 Lssa7g03501 Laca7g02848 Tako4g03863 Tamo4g02810 Pslu1g21186 Lomi1g00330 Lomi2g04338 . Ecan3g02196 Soca5g02426 . Artr3g11455 . . Aann4g01070 . Chmo13g00830 . Chmo15g00727 . Chna2g00692 Cind3g04050 Pdy4g00557 Cobi6g01380 Hean15g03958 Bial24g02207 Bial12g02348 . . Hetu17g02446 Hetu16g02592 . Amtr02g04102 . . . . . . . . Stre9g01571 . Cobi4g03052 Hean11g00913 Bial4g03340 Bial16g02723 Dapi7g00357 Dapi23g00377 Hetu32g00732 Hetu31g00672 Hetu33g00797 Amtr02g06920 Smso7g00027 Smso29g00033 . . . . . . Stre6g00455 Mimi17g00453
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
   
Gene_GFF
Select Chromosome Start End Strand Old_gene Gene Num
4 58740191 58747825 + chr4g0774371 Aann4g01064 1064
4 58749113 58753270 + chr4g0774381 Aann4g01065 1065
4 58753272 58757044 - chr4g0774391 Aann4g01066 1066
4 58802816 58806250 + chr4g0774461 Aann4g01067 1067
4 58983055 58986242 - chr4g0774571 Aann4g01069 1069
4 58995326 59001236 - chr4g0774581 Aann4g01070 1070
5 161517769 161520699 + Aargg5g27470.1 Aary5g02747 2747
5 161521778 161525548 - Aargg5g27480.1 Aary5g02748 2748
5 161547269 161553180 - Aargg5g27490.1 Aary5g02749 2749
2 81656428 81661855 + AtrifAMIRv0_Chr02g0136981 Amtr02g04102 4102
2 81683825 81686389 + AtrifAMIRv0_Chr02g0136991 Amtr02g04103 4103
2 81702273 81704336 - AtrifAMIRv0_Chr02g0137001 Amtr02g04104 4104
2 81760514 81763103 + AtrifAMIRv0_Chr02g0137071 Amtr02g04111 4111
2 125862007 125867079 + AtrifAMIRv0_Chr02g0165051 Amtr02g06909 6909
2 125889841 125892362 - AtrifAMIRv0_Chr02g0165081 Amtr02g06912 6912
2 126003087 126006097 + AtrifAMIRv0_Chr02g0165141 Amtr02g06918 6918
2 126029612 126033559 - AtrifAMIRv0_Chr02g0165151 Amtr02g06919 6919
2 126038328 126042422 - AtrifAMIRv0_Chr02g0165161 Amtr02g06920 6920
1 7365577 7371188 + AmiAMIRv0_Chr01g0003981 Armi1g00398 398
1 7384690 7389156 + AmiAMIRv0_Chr01g0004001 Armi1g00400 400
1 7389821 7392371 - AmiAMIRv0_Chr01g0004011 Armi1g00401 401
1 7505883 7509822 + AmiAMIRv0_Chr01g0004041 Armi1g00404 404
1 7513968 7516421 - AmiAMIRv0_Chr01g0004051 Armi1g00405 405
1 7518687 7521914 - AmiAMIRv0_Chr01g0004061 Armi1g00406 406
1 7534070 7539267 - AmiAMIRv0_Chr01g0004071 Armi1g00407 407
3 386397714 386403188 + AtridAMIRv0_Chr03g0421631 Artr3g11427 11427
3 386481472 386484779 + AtridAMIRv0_Chr03g0421661 Artr3g11430 11430
3 386485683 386488644 - AtridAMIRv0_Chr03g0421671 Artr3g11431 11431
3 387306951 387310979 - AtridAMIRv0_Chr03g0421901 Artr3g11454 11454
3 387322888 387327191 - AtridAMIRv0_Chr03g0421911 Artr3g11455 11455
4 76074871 76079841 + g43171.t1 Bial4g03332 3332
4 76089711 76092659 - g43174.t1 Bial4g03335 3335
4 76131152 76134667 + g43176.t1 Bial4g03337 3337
4 76145071 76149575 - g43177.t1 Bial4g03338 3338
4 76150701 76154079 - g43178.t1 Bial4g03339 3339
4 76178231 76184382 - g43179.t1 Bial4g03340 3340
12 53724517 53728043 - g35543.t1 Bial12g02344 2344
12 53741814 53744686 + g35544.t1 Bial12g02345 2345
12 53750018 53753305 - g35546.t1 Bial12g02347 2347
12 53763346 53769157 - g35547.t1 Bial12g02348 2348
16 69954866 69965756 + g127486.t1 Bial16g02714 2714
16 69970293 69973177 - g127484.t1 Bial16g02716 2716
16 70010480 70014108 + g127482.t1 Bial16g02718 2718
16 70038303 70045738 - g127481.t1 Bial16g02719 2719
16 70047465 70048371 - g127480.t1 Bial16g02720 2720
16 70059837 70064817 - g127477.t1 Bial16g02723 2723
24 52596417 52599943 - g67870.t1 Bial24g02204 2204
24 52613714 52616586 + g67871.t1 Bial24g02205 2205
24 52621918 52625205 - g67872.t1 Bial24g02206 2206
24 52635246 52642154 - g67873.t1 Bial24g02207 2207
3 3736347 3743432 + CtAH03T0031100.1 Cati3g00440 440
3 3750329 3754776 + CtAH03T0031300.1 Cati3g00442 442
3 3754874 3758434 - CtAH03T0031400.2 Cati3g00444 444
3 3805669 3810558 + CtAH03T0031500.1 Cati3g00445 445
3 3812221 3816130 - CtAH03T0031600.1 Cati3g00446 446
3 3818692 3822042 - CtAH03T0031700.1 Cati3g00447 447
3 3825970 3832715 - CtAH03T0031800.1 Cati3g00448 448
2 67787413 67792457 + gnl|WGS:LEKV|Ccrd_011111.mRNA.1_mrna Ccar2g02064 2064
2 67795665 67799383 + gnl|WGS:LEKV|Ccrd_011112.mRNA.1_mrna Ccar2g02065 2065
2 67800861 67806158 + gnl|WGS:LEKV|Ccrd_011113.mRNA.1_mrna Ccar2g02066 2066
2 67809093 67813119 - gnl|WGS:LEKV|Ccrd_011114.mRNA.1_mrna Ccar2g02067 2067
2 67838751 67843171 + gnl|WGS:LEKV|Ccrd_011115.mRNA.1_mrna Ccar2g02068 2068
2 67843077 67847000 - gnl|WGS:LEKV|Ccrd_011116.mRNA.1_mrna Ccar2g02069 2069
2 67861721 67867219 + gnl|WGS:LEKV|Ccrd_011118.mRNA.1_mrna Ccar2g02070 2070
2 85086749 85091584 + >KAJ9562706.1 Ceso2g03441 3441
2 85096649 85100958 + >KAJ9562705.1 Ceso2g03442 3442
6 233886588 233892115 + ClaG1_Chr06g0431101 Chla6g05863 5863
6 233919651 233923599 + ClaG1_Chr06g0431111 Chla6g05864 5864
6 233997601 234000484 + ClaG1_Chr06g0431131 Chla6g05866 5866
6 235876554 235879095 - ClaG1_Chr06g0431391 Chla6g05892 5892
7 64039677 64042531 + CmaNakai_Chr07g0648251 Chma7g02523 2523
13 41974325 41975916 + evm.model.scaffold_461.300 Chmo13g00830 830
13 42247931 42250126 + evm.model.scaffold_461.306 Chmo13g00831 831
13 42522253 42527249 - evm.model.scaffold_461.315 Chmo13g00836 836
13 42590185 42593720 + evm.model.scaffold_461.317 Chmo13g00837 837
13 42593894 42599317 - evm.model.scaffold_461.318 Chmo13g00838 838
13 42617123 42622887 - evm.model.scaffold_461.319 Chmo13g00839 839
15 41027029 41032635 + evm.model.scaffold_279.41 Chmo15g00727 727
15 41322515 41341089 + evm.model.scaffold_279.20 Chmo15g00728 728
15 41508877 41510928 - evm.model.scaffold_279.10 Chmo15g00731 731
15 41559897 41563311 + evm.model.scaffold_279.9 Chmo15g00732 732
15 41563485 41567783 - evm.model.scaffold_279.8 Chmo15g00733 733
15 41584957 41595007 - evm.model.scaffold_279.7 Chmo15g00734 734
2 53368985 53374223 + Cn0067110 Chna2g00692 692
2 53583759 53586516 + Cn0067150 Chna2g00694 694
2 53771027 53778461 + Cn0067160 Chna2g00695 695
2 53873882 53875668 - Cn0067180 Chna2g00697 697
2 53995582 54000665 + Cn0067190 Chna2g00698 698
2 53999094 54003381 - Cn0067200 Chna2g00699 699
2 54044437 54051318 - Cn0067240 Chna2g00702 702
4 132118110 132122931 + KAI3753685.1 Cich4g04550 4550
4 132128897 132131433 + KAI3753686.1 Cich4g04551 4551
4 132134435 132136220 + KAI3753687.1 Cich4g04552 4552
4 132149637 132153091 - KAI3753688.1 Cich4g04553 4553
4 132236532 132238037 + KAI3753691.1 Cich4g04556 4556
4 132238356 132240762 - KAI3753692.1 Cich4g04557 4557
4 132246140 132250664 - KAI3753694.1 Cich4g04559 4559
5 78124578 78129353 + KAI3509782.1 Cien5g03262 3262
5 78135348 78137646 + KAI3509783.1 Cien5g03263 3263
5 78139641 78142266 + KAI3509784.1 Cien5g03264 3264
5 78157529 78160961 - KAI3509785.1 Cien5g03265 3265
5 78212681 78214018 + KAI3509787.1 Cien5g03267 3267
5 78214367 78216717 - KAI3509788.1 Cien5g03268 3268
5 78220844 78225189 - KAI3509789.1 Cien5g03269 3269
3 327102502 327107504 - D.indicum_Contig463_G00003.t1 Cind3g04050 4050
3 326967272 326968816 - D.indicum_Contig463_G00004.t1 Cind3g04051 4051
3 326895685 326902323 - D.indicum_Contig463_G00005.t1 Cind3g04052 4052
3 326773825 326777773 + D.indicum_Contig463_G00007.t1 Cind3g04054 4054
3 326593963 326596879 - D.indicum_Contig463_G00008.t1 Cind3g04055 4055
3 326588240 326593043 + D.indicum_Contig463_G00009.t1 Cind3g04056 4056
3 326558847 326561341 + D.indicum_Contig463_G00010.t1 Cind3g04057 4057
4 79543908 79550072 + h2tg000009l_1.g42233.t1 Cobi4g03046 3046
4 79558162 79561439 - h2tg000009l_1.g42231.t1 Cobi4g03048 3048
4 79591861 79595033 + h2tg000009l_1.g42230.t1 Cobi4g03049 3049
4 79606499 79613248 - h2tg000009l_1.g42229.t1 Cobi4g03050 3050
4 79617089 79619494 - h2tg000009l_1.g42228.t1 Cobi4g03051 3051
4 79624832 79630256 - h2tg000009l_1.g42227.t1 Cobi4g03052 3052
6 11194914 11202191 + h2tg000021l_1.g11296.t1 Cobi6g01380 1380
6 11207414 11215709 + h2tg000021l_1.g11295.t1 Cobi6g01381 1381
6 11221991 11224926 - h2tg000021l_1.g11294.t1 Cobi6g01382 1382
6 11235642 11239651 + h2tg000021l_1.g11293.t1 Cobi6g01383 1383
7 7692595 7699039 + h1tg000030l.g76947.t1 Dapi7g00357 357
7 7701369 7706091 + h1tg000030l.g76948.t1 Dapi7g00358 358
7 7747916 7750827 - h1tg000030l.g76949.t1 Dapi7g00359 359
7 7862122 7863883 + h1tg000030l.g76950.t1 Dapi7g00360 360
7 7884920 7890609 - h1tg000030l.g76952.t1 Dapi7g00362 362
23 8389023 8399987 + h2tg000233l.g74341.t1 Dapi23g00377 377
23 8402347 8407995 + h2tg000233l.g74342.t1 Dapi23g00378 378
23 8418606 8421583 - h2tg000233l.g74343.t1 Dapi23g00379 379
23 8521314 8523212 + h2tg000233l.g74344.t1 Dapi23g00380 380
23 8561642 8567323 - h2tg000233l.g74348.t1 Dapi23g00384 384
3 32775171 32780742 + XM_043764932.1 Ecan3g02196 2196
3 32784653 32787707 + XM_043762836.1 Ecan3g02197 2197
3 32808361 32812533 - XM_043764657.1 Ecan3g02199 2199
3 32844259 32848196 + XM_043763529.1 Ecan3g02200 2200
3 32848790 32851620 - XM_043766308.1 Ecan3g02202 2202
3 32851733 32858906 - XM_043766808.1 Ecan3g02203 2203
6 26760874 26765466 + evm.model.ctg2232.2 Enbr6g00753 753
6 26769776 26774060 - evm.model.ctg2232.4 Enbr6g00755 755
6 26837573 26840731 + evm.model.ctg2232.5 Enbr6g00756 756
1 6388138 6390185 + FliAMIRv0_Chr01g0003061 Fli1g00311 311
1 6400069 6407836 + FliAMIRv0_Chr01g0003071 Fli1g00312 312
1 6425735 6429188 - FliAMIRv0_Chr01g0003081 Fli1g00313 313
1 6492614 6502741 - FliAMIRv0_Chr01g0003111 Fli1g00316 316
11 78528006 78534970 + FraAMIRv0_Chr11g0225081 Fra11g02486 2486
11 78555296 78558692 + FraAMIRv0_Chr11g0225111 Fra11g02489 2489
11 78564409 78568797 - FraAMIRv0_Chr11g0225121 Fra11g02490 2490
11 78570833 78572843 - FraAMIRv0_Chr11g0225131 Fra11g02491 2491
2 3887087 3889180 + FsoAMIRv0_Chr02g0030921 Fso2g00273 273
2 3901137 3904568 - FsoAMIRv0_Chr02g0030931 Fso2g00274 274
2 3940776 3941528 - FsoAMIRv0_Chr02g0030951 Fso2g00276 276
4 120055612 120061836 + FtrAMIRv0_Chr04g0130771 Ftr4g03643 3643
4 120100705 120105517 - FtrAMIRv0_Chr04g0130801 Ftr4g03646 3646
4 120107812 120109824 - FtrAMIRv0_Chr04g0130811 Ftr4g03647 3647
3 75135467 75138081 - GcoAMIRv0_Chr03g0168481 Glco3g01219 1219
3 75436267 75440032 + GcoAMIRv0_Chr03g0168521 Glco3g01223 1223
3 75441048 75444321 - GcoAMIRv0_Chr03g0168531 Glco3g01224 1224
3 75447545 75453146 - GcoAMIRv0_Chr03g0168541 Glco3g01225 1225
11 22022902 22027861 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0476541 Hean11g00913 913
11 22037234 22042464 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0476551 Hean11g00914 914
11 22044198 22050055 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0476561 Hean11g00915 915
11 22075217 22080430 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0476571 Hean11g00916 916
11 22369997 22373023 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0476611 Hean11g00918 918
11 22377322 22377681 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0476641 Hean11g00921 921
11 22378761 22390681 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0476651 Hean11g00922 922
15 152392513 152397951 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0716761 Hean15g03958 3958
15 152487760 152491126 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0716771 Hean15g03959 3959
15 152928625 152932611 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0716801 Hean15g03961 3961
15 153079660 153082825 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0716841 Hean15g03963 3963
16 136765689 136768254 - >Htub.h1tg001448l.g51.t1 Hetu16g02584 2584
16 137337064 137340155 - >Htub.h1tg001448l.g55.t1 Hetu16g02588 2588
16 137634301 137638907 - >Htub.h1tg001448l.g60.t1 Hetu16g02592 2592
17 128718537 128727803 - >Htub.h2tg000657l.g252.t1 Hetu17g02440 2440
17 128872152 128874622 - >Htub.h2tg000657l.g254.t1 Hetu17g02442 2442
17 129254016 129259601 + >Htub.h1tg000886l.g531.t1 Hetu17g02446 2446
31 28017193 28022052 + >Htub.h1tg002695l.g163.t1 Hetu31g00672 672
31 28322412 28325580 - >Htub.h1tg002695l.g159.t1 Hetu31g00676 676
31 28549751 28552184 + >Htub.h1tg002695l.g153.t1 Hetu31g00682 682
31 28559669 28566494 - >Htub.h1tg002695l.g151.t1 Hetu31g00684 684
32 31548332 31555514 + >Htub.h1tg002251l.g155.t1 Hetu32g00732 732
32 31600241 31603450 - >Htub.h1tg002251l.g150.t1 Hetu32g00737 737
32 31735213 31737601 + >Htub.h1tg002251l.g148.t1 Hetu32g00739 739
32 31743166 31750613 - >Htub.h1tg002251l.g146.t1 Hetu32g00741 741
33 31417293 31424980 + >Htub.h1tg001856l.g216.t1 Hetu33g00797 797
33 31507405 31510188 - >Htub.h1tg001856l.g212.t1 Hetu33g00801 801
33 31653845 31656277 + >Htub.h1tg001856l.g211.t1 Hetu33g00802 802
33 31663762 31670566 - >Htub.h1tg001856l.g209.t1 Hetu33g00803 803
7 136332116 136338189 + CAI9295036.1 Laca7g02848 2848
7 136361485 136364450 + CAI9295037.1 Laca7g02849 2849
7 136369911 136371704 + CAI9295038.1 Laca7g02850 2850
7 136405413 136409951 - CAI9295039.1 Laca7g02851 2851
7 136809645 136811632 + CAI9295041.1 Laca7g02853 2853
7 136812986 136814991 - CAI9295042.1 Laca7g02854 2854
1 2830518 2835320 + LmiAMIRv0_Chr01g0003301 Lomi1g00330 330
1 2839097 2841344 + LmiAMIRv0_Chr01g0003311 Lomi1g00331 331
1 2854883 2857898 - LmiAMIRv0_Chr01g0003321 Lomi1g00332 332
1 2877494 2879719 - LmiAMIRv0_Chr01g0003331 Lomi1g00333 333
2 48704773 48708583 + LmiAMIRv0_Chr02g0088661 Lomi2g04333 4333
2 48714760 48717005 - LmiAMIRv0_Chr02g0088671 Lomi2g04334 4334
2 48735842 48738878 + LmiAMIRv0_Chr02g0088691 Lomi2g04336 4336
2 48754256 48756489 - LmiAMIRv0_Chr02g0088701 Lomi2g04337 4337
2 48759906 48764728 - LmiAMIRv0_Chr02g0088711 Lomi2g04338 4338
7 185359330 185365741 + >KAJ0198576.1 Lssa7g03501 3501
7 185416064 185419020 + >KAJ0195621.1 Lssa7g03503 3503
7 185442042 185443680 + >KAJ0198189.1 Lssa7g03504 3504
7 185531921 185536328 - >KAJ0195682.1 Lssa7g03505 3505
7 185861040 185863265 + >KAJ0197741.1 Lssa7g03509 3509
7 185868798 185870832 - >KAJ0195229.1 Lssa7g03510 3510
7 185872875 185877216 - >KAJ0196728.1 Lssa7g03511 3511
17 15477435 15483204 + KAD3066775.1 Mimi17g00453 453
17 15586045 15589595 + KAD3066776.1 Mimi17g00454 454
17 15613111 15616467 - KAD3066777.1 Mimi17g00455 455
17 15741405 15743649 + KAD3066781.1 Mimi17g00459 459
17 15759031 15793697 - KAD3066783.1 Mimi17g00461 461
4 10406135 10410469 + PdyAMIRv0_Chr04g0153641 Pdy4g00557 557
4 10436000 10438523 + PdyAMIRv0_Chr04g0153651 Pdy4g00558 558
4 10442523 10448170 + PdyAMIRv0_Chr04g0153661 Pdy4g00559 559
4 10460235 10463555 - PdyAMIRv0_Chr04g0153681 Pdy4g00561 561
4 10596815 10599773 + PdyAMIRv0_Chr04g0153731 Pdy4g00566 566
4 10600811 10603010 - PdyAMIRv0_Chr04g0153741 Pdy4g00567 567
4 10604135 10610640 - PdyAMIRv0_Chr04g0153751 Pdy4g00568 568
1 152222510 152226950 + PluAMIRv0_Chr01g0210751 Pslu1g21169 21169
1 152229574 152231451 + PluAMIRv0_Chr01g0210761 Pslu1g21170 21170
1 152232734 152234916 - PluAMIRv0_Chr01g0210771 Pslu1g21171 21171
1 152270462 152273482 + PluAMIRv0_Chr01g0210781 Pslu1g21172 21172
1 152296037 152302516 - PluAMIRv0_Chr01g0210851 Pslu1g21179 21179
1 152366879 152371585 - PluAMIRv0_Chr01g0210921 Pslu1g21186 21186
12 6853623 6857737 + SinAMIRv0_Chr12g0359261 Sain12g00362 362
12 6950101 6952645 + SinAMIRv0_Chr12g0359291 Sain12g00365 365
12 6953260 6955511 - SinAMIRv0_Chr12g0359301 Sain12g00366 366
12 7147444 7150998 + SinAMIRv0_Chr12g0359331 Sain12g00369 369
12 7181603 7183673 - SinAMIRv0_Chr12g0359341 Sain12g00370 370
12 7185939 7188181 - SinAMIRv0_Chr12g0359351 Sain12g00371 371
12 7204363 7210084 - SinAMIRv0_Chr12g0359371 Sain12g00373 373
7 273468 280012 + KAI3809601.1 Smso7g00021 21
7 283744 285345 - KAI3809603.1 Smso7g00023 23
7 319475 322773 + KAI3809604.1 Smso7g00024 24
7 325817 329060 - KAI3809605.1 Smso7g00025 25
7 334092 336444 - KAI3809606.1 Smso7g00026 26
7 358225 365090 - KAI3809607.1 Smso7g00027 27
13 17570935 17573384 + KAI3786490.1 Smso13g00233 233
13 17708295 17712200 - KAI3786492.1 Smso13g00235 235
29 504051 513057 + KAI3675022.1 Smso29g00028 28
29 517034 518593 - KAI3675024.1 Smso29g00030 30
29 537452 540763 + KAI3675025.1 Smso29g00031 31
29 546298 550712 - KAI3675026.1 Smso29g00032 32
29 592207 594942 - KAI3675027.1 Smso29g00033 33
5 25784057 25790267 + asmbl_1972.p1 Soca5g02418 2418
5 25790387 25793895 + transfrag11073.t01 Soca5g02420 2420
5 25794472 25798279 - transfrag11074.t01 Soca5g02423 2423
5 25845062 25848676 + transfrag11075.t01 Soca5g02424 2424
5 25878234 25882142 - transfrag11076.t01 Soca5g02425 2425
5 25889915 25896777 - augustus16672.t01 Soca5g02426 2426
6 12543210 12549723 + Streb.6G004550.1 Stre6g00455 455
6 12553545 12558098 + Streb.6G004560.1 Stre6g00456 456
6 12577431 12583731 + Streb.6G004570.1 Stre6g00457 457
6 12588547 12593141 - Streb.6G004580.1 Stre6g00458 458
6 12725361 12728224 + Streb.6G004620.1 Stre6g00462 462
6 12752840 12761440 - Streb.6G004660.1 Stre6g00466 466
9 27555109 27559400 + Streb.9G015690.1 Stre9g01569 1569
9 27560712 27563936 - Streb.9G015700.1 Stre9g01570 1570
9 27577899 27583007 - Streb.9G015710.1 Stre9g01571 1571
1 49853660 49858995 + >KAK1439633.1 Taer1g05453 5453
1 49880711 49884065 + >KAK1439638.1 Taer1g05458 5458
1 49889754 49894514 - >KAK1439639.1 Taer1g05459 5459
1 49894654 49896956 - >KAK1439640.1 Taer1g05460 5460
4 86827734 86836212 + TkA04G343630.2 Tako4g03845 3845
4 86893302 86895700 + TkA04G343820.1 Tako4g03855 3855
4 86896555 86898643 - TkA04G343830.1 Tako4g03856 3856
4 86953884 86958646 + TkA04G344010.1 Tako4g03858 3858
4 86992508 86994130 - TkA04G344130.1 Tako4g03859 3859
4 87018190 87021065 - TkA04G344190.1 Tako4g03862 3862
4 87036043 87042621 - TkA04G344300.1 Tako4g03863 3863
4 53082052 53084235 + TbA04G030450.1 Tamo4g02801 2801
4 53085757 53088019 - TbA04G030440.1 Tamo4g02802 2802
4 53177551 53182690 + TbA04G030360.1 Tamo4g02805 2805
4 53193982 53195760 - TbA04G030350.1 Tamo4g02806 2806
4 53197655 53200351 - TbA04G030340.1 Tamo4g02807 2807
4 53233589 53239711 - TbA04G030300.1 Tamo4g02810 2810
       
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