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AGRP

Asteraceae Genomic Research Platform

Gene Search

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Example:

Hierarchical alignments with the Arctium lappa genome as reference

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Asteraceae genomes. We used Arctium lappa as a reference, and by comparing homologous gene locus maps and Ks values between Arctium lappa and other Asteraceae, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We constructed a 74×31,441 macro-matrices.


Select Armi_1 Sain_1 Ceso_1 Cati_1 Ccar_1 Cien_1 Cich_1 Lssa_1 Laca_1 Tako_1 Tamo_1 Pslu_1 Lomi_1 Lomi_2 Enbr_1 Ecan_1 Soca_1 Glco_1 Artr_1 Aary_1 Aary_2 Aann_1 Chma_1 Chmo_1 Chmo_2 Chmo_3 Chla_1 Chna_1 Cind_1 Pdy_1 Cobi_1 Hean_1 Bial_1 Bial_2 Dapi_1 Dapi_2 Hetu_1 Hetu_2 Hetu_3 Amtr_1 Smso_1 Smso_2 Taer_1 Fro_1 Fso_1 Ftr_1 Fra_1 Fli_1 Stre_1 Mimi_1 Cobi_2 Hean_2 Bial_3 Bial_4 Dapi_3 Dapi_4 Hetu_4 Hetu_5 Hetu_6 Amtr_2 Smso_3 Smso_4 Taer_2 Fro_2 Fso_2 Ftr_2 Fra_2 Fli_2 Stre_2 Mimi_2
Armi1g00871 Sain12g00691 . Cati3g00906 Ccar2g01856 Cien5g03078 Cich4g04180 Lssa7g03130 Laca7g02551 Tako4g04451 Tamo4g03199 Pslu1g21736 Lomi1g00140 Lomi2g04520 . Ecan3g01919 Soca5g02964 Glco3g00256 . . . . Chma7g08765 Chmo13g00447 Chmo14g00409 Chmo15g00290 Chla6g06494 Chna2g00264 Cind3g00131 Pdy4g00251 . Hean4g04486 . . . . Hetu11g00105 Hetu12g00100 Hetu10g00123 . . Smso26g02019 . . . . . . . . Cobi4g03319 Hean16g00829 Bial4g03635 Bial24g02357 Dapi7g00112 Dapi23g00133 Hetu48g00879 Hetu46g01002 Hetu47g00975 . Smso7g00214 Smso29g00254 . . . . . . Stre6g00165 Mimi17g00156
Armi1g00874 Sain12g00694 Ceso2g01614 Cati3g00907 Ccar2g01855 Cien5g03077 Cich4g04174 Lssa7g03127 Laca7g02549 Tako4g04453 Tamo4g03201 Pslu1g21737 Lomi1g00139 Lomi2g04521 Enbr6g01271 Ecan3g01918 Soca5g02965 Glco3g00260 . . . . Chma7g08767 Chmo13g00446 Chmo14g00408 Chmo15g00289 Chla6g06495 Chna2g00263 Cind3g00132 Pdy4g00250 . . . . . . . . . . . . . . . . . . . . Cobi4g03318 Hean16g00830 Bial4g03634 Bial16g02981 Dapi7g00113 Dapi23g00134 Hetu48g00878 Hetu46g01001 Hetu47g00974 Amtr01g04300 Smso7g00213 Smso29g00253 Taer1g05693 Fro12g02540 . Ftr4g03825 Fra11g02666 Fli1g00132 Stre6g00166 Mimi17g00157
Armi1g00875 Sain12g00695 Ceso2g01617 Cati3g00908 Ccar2g01854 Cien5g03076 Cich4g04172 Lssa7g03125 Laca7g02546 Tako4g04457 Tamo4g03202 Pslu1g21739 Lomi1g00138 Lomi2g04522 Enbr6g01270 Ecan3g01917 Soca5g02970 Glco3g00265 Artr3g12394 Aary5g02982 . Aann4g01482 Chma7g08773 Chmo13g00441 Chmo14g00404 Chmo15g00286 Chla6g06499 Chna2g00260 Cind3g00136 Pdy4g00249 . Hean4g04490 . . Dapi16g02028 . Hetu11g00103 Hetu12g00098 Hetu10g00121 . . Smso26g02021 . . . . . . . Mimi9g01549 . . . . . . . . . . . . . . . . . . . .
Armi1g00876 Sain12g00699 . . Ccar2g01853 Cien5g03075 Cich4g04171 Lssa7g03121 Laca7g02545 . Tamo4g03204 Pslu1g21740 . Lomi2g04523 . Ecan3g01916 Soca5g02971 Glco3g00266 Artr3g12395 Aary5g02983 . Aann4g01483 . . . . . . . Pdy4g00248 . . . . . . . . . . . . . . . . . . . . Cobi4g03317 Hean16g00833 Bial4g03632 Bial16g02979 . . Hetu48g00877 Hetu46g01000 Hetu47g00973 Amtr01g04298 . . Taer1g05692 Fro12g02539 . Ftr4g03824 Fra11g02665 Fli1g00134 Stre6g00167 Mimi17g00158
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00878 . . . Ccar2g01852 . . . . . . . . . Enbr6g01268 Ecan3g01915 Soca5g02973 . . . . . Chma7g08774 . Chmo14g00402 Chmo15g00283 Chla6g06506 Chna2g00258 Cind3g05826 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00882 Sain12g00700 Ceso2g01627 . Ccar2g01851 . Cich4g04169 Lssa7g03113 Laca7g02542 Tako4g04467 . Pslu1g21744 Lomi1g00135 . . . . Glco3g00290 Artr3g12403 Aary5g02986 . Aann4g01486 Chma7g08897 Chmo13g00436 Chmo14g00401 Chmo15g00282 Chla6g06507 Chna2g00257 Cind3g05825 . . . . . . . . . . . . . . . . . . . . . Cobi4g03316 Hean16g00839 Bial4g03630 Bial16g02977 Dapi7g00118 Dapi23g00137 Hetu48g00876 Hetu46g00996 . Amtr01g04285 . Smso29g00252 Taer1g05690 Fro12g02538 . Ftr4g03823 Fra11g02664 Fli1g00136 . Mimi17g00160
Armi1g00884 Sain12g00704 . Cati3g00925 Ccar2g01850 Cien5g03072 Cich4g04167 Lssa7g03112 Laca7g02541 Tako4g04468 Tamo4g03209 . . . Enbr6g01266 Ecan3g01913 Soca5g02975 Glco3g00291 . Aary5g02992 . Aann4g01492 Chma7g08904 . . . Chla6g06512 Chna2g00253 Cind3g05814 Pdy4g00243 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00885 Sain12g00705 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00886 Sain12g00706 Ceso2g01635 Cati3g00936 Ccar2g01847 . . . . . . Pslu1g21748 . . Enbr6g01265 Ecan3g01911 Soca5g02978 . . . . . Chma7g08776 Chmo13g00431 Chmo14g00392 . . Chna2g00249 Cind3g03506 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
   
Gene_GFF
Select Chromosome Start End Strand Old_gene Gene Num
4 73356764 73360959 + chr4g0787261 Aann4g01482 1482
4 73362331 73362891 - chr4g0787271 Aann4g01483 1483
4 73402475 73405632 + chr4g0787311 Aann4g01486 1486
4 73622125 73625113 + chr4g0787471 Aann4g01492 1492
5 181556438 181562744 + Aargg5g29820.1 Aary5g02982 2982
5 181563970 181564530 - Aargg5g29830.1 Aary5g02983 2983
5 181663008 181663871 + Aargg5g29860.1 Aary5g02986 2986
5 181953784 181954366 - Aargg5g29920.1 Aary5g02992 2992
1 115729251 115730153 - AtrifAMIRv0_Chr01g0042851 Amtr01g04285 4285
1 115901339 115902851 + AtrifAMIRv0_Chr01g0042981 Amtr01g04298 4298
1 115958886 115963952 + AtrifAMIRv0_Chr01g0043001 Amtr01g04300 4300
1 22931558 22932010 - AmiAMIRv0_Chr01g0008711 Armi1g00871 871
1 23078358 23082930 - AmiAMIRv0_Chr01g0008741 Armi1g00874 874
1 23099532 23105067 + AmiAMIRv0_Chr01g0008751 Armi1g00875 875
1 23123085 23123726 - AmiAMIRv0_Chr01g0008761 Armi1g00876 876
1 23223896 23225003 + AmiAMIRv0_Chr01g0008781 Armi1g00878 878
1 23459987 23460683 + AmiAMIRv0_Chr01g0008821 Armi1g00882 882
1 23493366 23494675 + AmiAMIRv0_Chr01g0008841 Armi1g00884 884
1 23535875 23537350 + AmiAMIRv0_Chr01g0008851 Armi1g00885 885
1 23545065 23546111 + AmiAMIRv0_Chr01g0008861 Armi1g00886 886
3 425455582 425459505 + AtridAMIRv0_Chr03g0431301 Artr3g12394 12394
3 425462816 425463379 - AtridAMIRv0_Chr03g0431311 Artr3g12395 12395
3 425664695 425665502 + AtridAMIRv0_Chr03g0431391 Artr3g12403 12403
4 81845828 81847089 - g62292.t1 Bial4g03630 3630
4 81885033 81886205 + g62290.t1 Bial4g03632 3632
4 81899741 81906164 + g62288.t1 Bial4g03634 3634
4 81913800 81914231 + g62287.t1 Bial4g03635 3635
16 74862715 74867779 - g59550.t1 Bial16g02977 2977
16 74890234 74891379 + g59548.t1 Bial16g02979 2979
16 74902829 74911340 + g59546.t1 Bial16g02981 2981
24 54287937 54288386 - g68023.t1 Bial24g02357 2357
3 10943472 10943987 - CtAH03T0064300.1 Cati3g00906 906
3 10965528 10974916 - CtAH03T0064400.1 Cati3g00907 907
3 10986960 10992035 + CtAH03T0064500.1 Cati3g00908 908
3 11517959 11521496 + CtAH03T0065800.1 Cati3g00925 925
3 12205867 12216273 + CtAH03T0066800.1 Cati3g00936 936
2 64795446 64796212 - gnl|WGS:LEKV|Ccrd_010893.mRNA.1_mrna Ccar2g01847 1847
2 64835730 64838929 - gnl|WGS:LEKV|Ccrd_010896.mRNA.1_mrna Ccar2g01850 1850
2 64849087 64849937 - gnl|WGS:LEKV|Ccrd_010897.mRNA.1_mrna Ccar2g01851 1851
2 64876025 64876483 - gnl|WGS:LEKV|Ccrd_010898.mRNA.1_mrna Ccar2g01852 1852
2 64890070 64890726 + gnl|WGS:LEKV|Ccrd_010899.mRNA.1_mrna Ccar2g01853 1853
2 64898638 64903924 - gnl|WGS:LEKV|Ccrd_010900.mRNA.1_mrna Ccar2g01854 1854
2 64907224 64911286 + gnl|WGS:LEKV|Ccrd_010901.mRNA.1_mrna Ccar2g01855 1855
2 64936032 64936825 + gnl|WGS:LEKV|Ccrd_010902.mRNA.1_mrna Ccar2g01856 1856
2 34307004 34312899 - >KAJ9561137.1 Ceso2g01614 1614
2 34327926 34332172 + >KAJ9561135.1 Ceso2g01617 1617
2 34544713 34546140 + >KAJ9561063.1 Ceso2g01627 1627
2 34802950 34803231 + >KAJ9561103.1 Ceso2g01635 1635
6 266308778 266309223 - ClaG1_Chr06g0437411 Chla6g06494 6494
6 266315137 266320721 - ClaG1_Chr06g0437421 Chla6g06495 6495
6 266380625 266386104 + ClaG1_Chr06g0437461 Chla6g06499 6499
6 266708111 266708935 + ClaG1_Chr06g0437531 Chla6g06506 6506
6 266770258 266771051 + ClaG1_Chr06g0437541 Chla6g06507 6507
6 266974917 266977486 + ClaG1_Chr06g0437591 Chla6g06512 6512
7 296981912 296982361 - CmaNakai_Chr07g0710671 Chma7g08765 8765
7 297008341 297010338 - CmaNakai_Chr07g0710691 Chma7g08767 8767
7 297106741 297110673 + CmaNakai_Chr07g0710751 Chma7g08773 8773
7 297114367 297115073 + CmaNakai_Chr07g0710761 Chma7g08774 8774
7 297123839 297124782 + CmaNakai_Chr07g0710781 Chma7g08776 8776
7 300027850 300028574 + CmaNakai_Chr07g0711991 Chma7g08897 8897
7 300210322 300212840 + CmaNakai_Chr07g0712061 Chma7g08904 8904
13 19346397 19347136 - evm.model.scaffold_1427.13 Chmo13g00431 431
13 19720082 19720831 - evm.model.scaffold_1427.38 Chmo13g00436 436
13 19824361 19919776 - evm.model.scaffold_1427.45 Chmo13g00441 441
13 19960109 19964440 + evm.model.scaffold_1427.54 Chmo13g00446 446
13 19972629 19973933 + evm.model.scaffold_1427.55 Chmo13g00447 447
14 16259782 16260489 - evm.model.scaffold_1782.7 Chmo14g00392 392
14 16603748 16604930 - evm.model.scaffold_601.108 Chmo14g00401 401
14 16631204 16654907 - evm.model.scaffold_601.107 Chmo14g00402 402
14 16754587 16759381 - evm.model.scaffold_601.103 Chmo14g00404 404
14 16893943 16898184 + evm.model.scaffold_601.97 Chmo14g00408 408
14 16972682 16974157 + evm.model.scaffold_601.96 Chmo14g00409 409
15 15017641 15018439 - evm.model.scaffold_1588.155 Chmo15g00282 282
15 15026485 15032154 - evm.model.scaffold_1588.156 Chmo15g00283 283
15 15108675 15113402 - evm.model.scaffold_1588.164 Chmo15g00286 286
15 15285564 15290252 + evm.model.scaffold_1588.170 Chmo15g00289 289
15 15327179 15328472 + evm.model.scaffold_1588.171 Chmo15g00290 290
2 14654962 14655908 - Cn1266730 Chna2g00249 249
2 14753406 14754110 - Cn1266690 Chna2g00253 253
2 14961727 14962669 - Cn1266600 Chna2g00257 257
2 15071878 15072849 - Cn1266590 Chna2g00258 258
2 15201794 15206586 - Cn1266560 Chna2g00260 260
2 15600646 15604568 + Cn1266480 Chna2g00263 263
2 15614538 15614987 + Cn1266470 Chna2g00264 264
4 122001806 122002381 - KAI3753302.1 Cich4g04167 4167
4 122039933 122040298 - KAI3753304.1 Cich4g04169 4169
4 122199037 122199696 + KAI3753306.1 Cich4g04171 4171
4 122203754 122207166 - KAI3753307.1 Cich4g04172 4172
4 122237717 122242422 + KAI3753309.1 Cich4g04174 4174
4 122319977 122320447 - KAI3753315.1 Cich4g04180 4180
5 73496060 73496479 - KAI3509592.1 Cien5g03072 3072
5 73577917 73578576 + KAI3509595.1 Cien5g03075 3075
5 73581871 73594905 - KAI3509596.1 Cien5g03076 3076
5 73597634 73602198 + KAI3509597.1 Cien5g03077 3077
5 73621885 73622352 - KAI3509598.1 Cien5g03078 3078
3 357595769 357596218 - D.indicum_Contig1097_G00006.t1 Cind3g00131 131
3 357605417 357610028 - D.indicum_Contig1097_G00007.t1 Cind3g00132 132
3 357805591 357809680 + D.indicum_Contig1097_G00011.t1 Cind3g00136 136
3 359324220 359325145 + D.indicum_Contig337_G00036.t1 Cind3g03506 3506
3 358610006 358612214 - D.indicum_Contig907_G00002.t1 Cind3g05814 5814
3 359075643 359076428 - D.indicum_Contig907_G00013.t1 Cind3g05825 5825
3 359089147 359089896 - D.indicum_Contig907_G00014.t1 Cind3g05826 5826
4 83330624 83331506 - h2tg000064l_1.g27531.t1 Cobi4g03316 3316
4 83367291 83369413 + h2tg000064l_1.g27532.t1 Cobi4g03317 3317
4 83377966 83386689 + h2tg000064l_1.g27533.t1 Cobi4g03318 3318
4 83396643 83397050 + h2tg000064l_1.g27534.t1 Cobi4g03319 3319
7 2234132 2234557 - h1tg000136l.g124552.t1 Dapi7g00112 112
7 2240179 2244329 - h1tg000136l.g124551.t1 Dapi7g00113 113
7 2311949 2312488 + h1tg000136l.g124546.t1 Dapi7g00118 118
16 79802296 79806914 + h1tg000026l.g56981.t1 Dapi16g02028 2028
23 2789325 2789750 - h2tg000064l.g12471.t1 Dapi23g00133 133
23 2795679 2800390 - h2tg000064l.g12472.t1 Dapi23g00134 134
23 2863073 2864659 + h2tg000064l.g12475.t1 Dapi23g00137 137
3 30101662 30102320 - XM_043766769.1 Ecan3g01911 1911
3 30129096 30129851 - XM_043766855.1 Ecan3g01913 1913
3 30139425 30151997 - XM_043764108.1 Ecan3g01915 1915
3 30162388 30163390 + XM_043766078.1 Ecan3g01916 1916
3 30177998 30183756 - XM_043764487.1 Ecan3g01917 1917
3 30187407 30192387 + XM_043764486.1 Ecan3g01918 1918
3 30200496 30201425 + XM_043765594.1 Ecan3g01919 1919
6 44399263 44400055 - evm.model.ctg2244.13 Enbr6g01265 1265
6 44602175 44602753 - evm.model.ctg1315.1 Enbr6g01266 1266
6 44700679 44702904 - evm.model.ctg1315.4 Enbr6g01268 1268
6 44775971 44784049 - evm.model.ctg1315.7 Enbr6g01270 1270
6 44842128 44846658 + evm.model.ctg1315.8 Enbr6g01271 1271
1 2650849 2657210 - FliAMIRv0_Chr01g0001281 Fli1g00132 132
1 2666714 2667790 - FliAMIRv0_Chr01g0001301 Fli1g00134 134
1 2694622 2695489 + FliAMIRv0_Chr01g0001321 Fli1g00136 136
11 80097889 80098766 - FraAMIRv0_Chr11g0226861 Fra11g02664 2664
11 80113188 80114282 + FraAMIRv0_Chr11g0226871 Fra11g02665 2665
11 80118918 80125328 + FraAMIRv0_Chr11g0226881 Fra11g02666 2666
12 33138294 33139154 - FroAMIRv0_Chr12g0220861 Fro12g02538 2538
12 33163991 33165070 + FroAMIRv0_Chr12g0220871 Fro12g02539 2539
12 33176302 33182799 + FroAMIRv0_Chr12g0220881 Fro12g02540 2540
4 122171024 122171782 - FtrAMIRv0_Chr04g0132571 Ftr4g03823 3823
4 122185537 122186751 + FtrAMIRv0_Chr04g0132581 Ftr4g03824 3824
4 122193314 122195741 + FtrAMIRv0_Chr04g0132591 Ftr4g03825 3825
3 14088948 14089397 - GcoAMIRv0_Chr03g0158851 Glco3g00256 256
3 14157323 14160442 - GcoAMIRv0_Chr03g0158891 Glco3g00260 260
3 14638326 14643477 + GcoAMIRv0_Chr03g0158941 Glco3g00265 265
3 14645161 14645712 - GcoAMIRv0_Chr03g0158951 Glco3g00266 266
3 15696943 15697477 + GcoAMIRv0_Chr03g0159191 Glco3g00290 290
3 15699688 15700231 + GcoAMIRv0_Chr03g0159201 Glco3g00291 291
4 206314832 206315591 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr04g0191281 Hean4g04486 4486
4 206353869 206362399 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr04g0191321 Hean4g04490 4490
16 23866076 23866514 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0732181 Hean16g00829 829
16 23890275 23898577 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0732191 Hean16g00830 830
16 23990750 23992209 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0732221 Hean16g00833 833
16 24274289 24275094 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0732301 Hean16g00839 839
10 4499706 4506107 - >Htub.h1tg003188l.g171.t1 Hetu10g00121 121
10 4544194 4547371 + >Htub.h1tg003188l.g169.t1 Hetu10g00123 123
11 3949070 3958733 - >Htub.h1tg000030l.g157.t1 Hetu11g00103 103
11 3983519 3983962 + >Htub.h1tg000030l.g159.t1 Hetu11g00105 105
12 4044218 4053576 - >Htub.h1tg000754l.g302.t1 Hetu12g00098 98
12 4087448 4087891 + >Htub.h1tg000754l.g304.t1 Hetu12g00100 100
46 49811996 49812631 + >Htub.h1tg000086l.g411.t1 Hetu46g00996 996
46 50574189 50575121 + >Htub.h1tg000086l.g407.t1 Hetu46g01000 1000
46 50828736 50834473 + >Htub.h1tg000086l.g406.t1 Hetu46g01001 1001
46 50864227 50864631 + >Htub.h1tg000086l.g405.t1 Hetu46g01002 1002
47 55149747 55150682 + >Htub.h1tg002868l.g45.t1 Hetu47g00973 973
47 55382244 55387503 + >Htub.h1tg002868l.g43.t1 Hetu47g00974 974
47 55441819 55442217 + >Htub.h1tg002868l.g42.t1 Hetu47g00975 975
48 46487915 46488543 + >Htub.h1tg003557l.g99.t1 Hetu48g00876 876
48 46782776 46783282 + >Htub.h1tg003557l.g98.t1 Hetu48g00877 877
48 46999708 47005141 + >Htub.h1tg001458l.g18.t1 Hetu48g00878 878
48 47112551 47112931 + >Htub.h1tg001458l.g19.t1 Hetu48g00879 879
7 121460653 121461880 - CAI9294720.1 Laca7g02541 2541
7 121477109 121478361 - CAI9294721.1 Laca7g02542 2542
7 121925095 121925757 + CAI9294724.1 Laca7g02545 2545
7 121940672 121943116 - CAI9294725.1 Laca7g02546 2546
7 122021915 122026479 + CAI9294729.1 Laca7g02549 2549
7 122062509 122062973 + CAI9294731.1 Laca7g02551 2551
1 1187973 1188487 - LmiAMIRv0_Chr01g0001351 Lomi1g00135 135
1 1203843 1208193 - LmiAMIRv0_Chr01g0001381 Lomi1g00138 138
1 1211292 1215700 + LmiAMIRv0_Chr01g0001391 Lomi1g00139 139
1 1225962 1226393 + LmiAMIRv0_Chr01g0001401 Lomi1g00140 140
2 50279335 50279766 - LmiAMIRv0_Chr02g0090531 Lomi2g04520 4520
2 50283794 50288185 - LmiAMIRv0_Chr02g0090541 Lomi2g04521 4521
2 50297239 50301122 + LmiAMIRv0_Chr02g0090551 Lomi2g04522 4522
2 50302731 50303390 - LmiAMIRv0_Chr02g0090561 Lomi2g04523 4523
7 164979421 164980630 - >KAJ0198013.1 Lssa7g03112 3112
7 165095717 165096306 - >KAJ0195506.1 Lssa7g03113 3113
7 165763910 165764572 + >KAJ0195306.1 Lssa7g03121 3121
7 165783249 165786018 - >KAJ0197235.1 Lssa7g03125 3125
7 165833557 165838278 + >KAJ0198274.1 Lssa7g03127 3127
7 165885689 165886153 + >KAJ0197392.1 Lssa7g03130 3130
9 56614504 56641005 + KAD5318284.1 Mimi9g01549 1549
17 4328415 4328858 + KAD3066478.1 Mimi17g00156 156
17 4338762 4346603 - KAD3066479.1 Mimi17g00157 157
17 4361961 4362860 - KAD3066480.1 Mimi17g00158 158
17 4402195 4403911 + KAD3066482.1 Mimi17g00160 160
4 5016622 5017362 - PdyAMIRv0_Chr04g0150511 Pdy4g00243 243
4 5103984 5104565 + PdyAMIRv0_Chr04g0150561 Pdy4g00248 248
4 5107251 5110362 - PdyAMIRv0_Chr04g0150571 Pdy4g00249 249
4 5114983 5119062 + PdyAMIRv0_Chr04g0150581 Pdy4g00250 250
4 5156274 5156750 + PdyAMIRv0_Chr04g0150591 Pdy4g00251 251
1 156162073 156162537 - PluAMIRv0_Chr01g0216411 Pslu1g21736 21736
1 156184773 156189087 - PluAMIRv0_Chr01g0216421 Pslu1g21737 21737
1 156196290 156200811 + PluAMIRv0_Chr01g0216441 Pslu1g21739 21739
1 156201636 156202286 - PluAMIRv0_Chr01g0216451 Pslu1g21740 21740
1 156229960 156230948 + PluAMIRv0_Chr01g0216491 Pslu1g21744 21744
1 156263821 156265926 - PluAMIRv0_Chr01g0216531 Pslu1g21748 21748
12 16039480 16039947 - SinAMIRv0_Chr12g0362551 Sain12g00691 691
12 16124285 16129084 - SinAMIRv0_Chr12g0362581 Sain12g00694 694
12 16133133 16136968 + SinAMIRv0_Chr12g0362591 Sain12g00695 695
12 16177187 16177831 - SinAMIRv0_Chr12g0362631 Sain12g00699 699
12 16310643 16311355 + SinAMIRv0_Chr12g0362641 Sain12g00700 700
12 16433788 16435038 + SinAMIRv0_Chr12g0362681 Sain12g00704 704
12 16461140 16463312 + SinAMIRv0_Chr12g0362691 Sain12g00705 705
12 16492050 16493085 + SinAMIRv0_Chr12g0362701 Sain12g00706 706
7 3739334 3744949 + KAI3809793.1 Smso7g00213 213
7 3750749 3751084 + KAI3809794.1 Smso7g00214 214
26 45368601 45369065 - KAI3695504.1 Smso26g02019 2019
26 45443110 45449076 + KAI3695506.1 Smso26g02021 2021
29 3996830 3998439 - KAI3675246.1 Smso29g00252 252
29 4037418 4043733 + KAI3675247.1 Smso29g00253 253
29 4049861 4050277 + KAI3675248.1 Smso29g00254 254
5 33145966 33147286 - transfrag31872.t01 Soca5g02964 2964
5 33156512 33161888 - transfrag31871.t01 Soca5g02965 2965
5 33177001 33182034 + asmbl_5656.p1 Soca5g02970 2970
5 33189367 33190277 - transfrag31869.t01 Soca5g02971 2971
5 33216669 33217142 + augustus47649.t01 Soca5g02973 2973
5 33254172 33259151 + transfrag31865.t01 Soca5g02975 2975
5 33304089 33309338 + augustus47642.t01 Soca5g02978 2978
6 4132841 4134361 - Streb.6G001650.1 Stre6g00165 165
6 4152485 4159801 - Streb.6G001660.1 Stre6g00166 166
6 4179318 4180499 - Streb.6G001670.1 Stre6g00167 167
1 51705453 51706378 - >KAK1439868.1 Taer1g05690 5690
1 51733344 51734153 + >KAK1439870.1 Taer1g05692 5692
1 51735697 51741488 + >KAK1439871.1 Taer1g05693 5693
4 102668152 102668927 - TkA04G408410.1 Tako4g04451 4451
4 102690575 102705139 - TkA04G408490.1 Tako4g04453 4453
4 102704583 102707157 + TkA04G408500.1 Tako4g04457 4457
4 103114701 103115520 + TkA04G409450.1 Tako4g04467 4467
4 103126960 103127644 + TkA04G409500.1 Tako4g04468 4468
4 61802293 61803068 - TbA04G019910.1 Tamo4g03199 3199
4 61839558 61844552 - TbA04G019850.1 Tamo4g03201 3201
4 61861516 61864056 + TbA04G019810.1 Tamo4g03202 3202
4 61888202 61888882 - TbA04G019780.1 Tamo4g03204 3204
4 61973517 61974861 + TbA04G019640.1 Tamo4g03209 3209
       
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