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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Hierarchical alignments with the Arctium lappa genome as reference

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Asteraceae genomes. We used Arctium lappa as a reference, and by comparing homologous gene locus maps and Ks values between Arctium lappa and other Asteraceae, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We constructed a 74×31,441 macro-matrices.


Select Armi_1 Sain_1 Ceso_1 Cati_1 Ccar_1 Cien_1 Cich_1 Lssa_1 Laca_1 Tako_1 Tamo_1 Pslu_1 Lomi_1 Lomi_2 Enbr_1 Ecan_1 Soca_1 Glco_1 Artr_1 Aary_1 Aary_2 Aann_1 Chma_1 Chmo_1 Chmo_2 Chmo_3 Chla_1 Chna_1 Cind_1 Pdy_1 Cobi_1 Hean_1 Bial_1 Bial_2 Dapi_1 Dapi_2 Hetu_1 Hetu_2 Hetu_3 Amtr_1 Smso_1 Smso_2 Taer_1 Fro_1 Fso_1 Ftr_1 Fra_1 Fli_1 Stre_1 Mimi_1 Cobi_2 Hean_2 Bial_3 Bial_4 Dapi_3 Dapi_4 Hetu_4 Hetu_5 Hetu_6 Amtr_2 Smso_3 Smso_4 Taer_2 Fro_2 Fso_2 Ftr_2 Fra_2 Fli_2 Stre_2 Mimi_2
Armi1g00306 Sain12g00284 Ceso2g03381 . . Cien5g03364 Cich4g04663 Lssa7g03630 Laca7g02954 Tako4g03708 Tamo4g02617 Pslu1g21028 Lomi1g00376 Lomi2g04281 Enbr6g02078 Ecan3g02283 Soca5g02322 . Artr3g11228 . . Aann4g00969 . . . . . . . Pdy4g00655 . . . . . . . . . . . . . . . . . . . . Cobi4g02974 Hean11g01009 Bial4g03245 Bial16g02641 Dapi7g00418 Dapi23g00445 Hetu32g00803 Hetu31g00747 Hetu33g00870 Amtr02g06776 Smso7g00381 Smso29g00429 . . . . . . Stre6g00533 Mimi17g00554
Armi1g00307 Sain12g00285 . Cati3g00339 . Cien5g03363 Cich4g04662 Lssa7g03626 Laca7g02953 . Tamo4g02618 Pslu1g21029 Lomi1g00375 Lomi2g04282 . Ecan3g02281 . . Artr3g11231 . Aary13g03205 Aann4g00971 . . . . . . . Pdy4g00654 . . . . . . . . . . . . . . . . . . . . Cobi4g02976 Hean11g01008 . Bial16g02643 Dapi7g00417 Dapi23g00444 Hetu32g00802 Hetu31g00746 Hetu33g00869 Amtr02g06779 Smso7g00380 Smso29g00426 Taer1g05393 Fro12g02255 Fso2g00342 Ftr4g03584 Fra11g02435 Fli1g00383 Stre6g00532 Mimi17g00551
Armi1g00308 Sain12g00287 Ceso2g03382 Cati3g00340 . Cien5g03362 Cich4g04660 Lssa7g03625 Laca7g02951 . Tamo4g02620 Pslu1g21030 Lomi1g00374 Lomi2g04283 . Ecan3g02279 . . Artr3g11254 . Aary13g03208 Aann4g00975 . . . . . . . Pdy4g00653 . . . . . . . . . . . . . . . . . . . . . Hean11g01007 . Bial16g02644 Dapi7g00416 Dapi23g00443 Hetu32g00801 Hetu31g00745 Hetu33g00868 Amtr02g06780 Smso7g00376 Smso29g00424 Taer1g05394 Fro12g02256 Fso2g00340 Ftr4g03585 Fra11g02436 Fli1g00382 Stre6g00531 Mimi17g00550
Armi1g00309 Sain12g00288 Ceso2g03383 Cati3g00341 . Cien5g03361 Cich4g04658 Lssa7g03624 Laca7g02950 . Tamo4g02621 Pslu1g21031 Lomi1g00373 Lomi2g04284 . Ecan3g02277 . . Artr3g11255 . Aary13g03209 Aann4g00976 . . . . . . . Pdy4g00652 . . . . . . . . . . . . . . . . . . . . Cobi4g02977 Hean11g01006 Bial4g03246 Bial16g02645 Dapi7g00415 Dapi23g00442 Hetu32g00800 Hetu31g00744 Hetu33g00867 Amtr02g06781 Smso7g00375 Smso29g00423 Taer1g05395 Fro12g02257 Fso2g00339 Ftr4g03586 Fra11g02437 Fli1g00381 Stre6g00530 Mimi17g00549
Armi1g00310 Sain12g00289 . Cati3g00343 . Cien5g03360 Cich4g04657 Lssa7g03623 . Tako4g03709 Tamo4g02622 Pslu1g21034 . Lomi2g04285 Enbr6g02083 Ecan3g02275 Soca5g02330 . Artr3g11256 . Aary13g03210 Aann4g00977 Chma7g07829 Chmo13g00917 Chmo14g00870 Chmo15g00802 Chla6g05772 Chna2g00776 Cind3g05625 Pdy4g00651 . . . . . . . . . . . . . . . . . . . . Cobi4g02978 Hean11g01004 Bial4g03247 Bial16g02646 Dapi7g00414 Dapi23g00441 Hetu32g00799 Hetu31g00743 Hetu33g00866 Amtr02g06782 . . Taer1g05397 Fro12g02258 Fso2g00337 Ftr4g03587 Fra11g02438 Fli1g00376 Stre6g00529 Mimi17g00548
Armi1g00311 Sain12g00290 . Cati3g00345 . Cien5g03358 Cich4g04655 Lssa7g03621 Laca7g02948 Tako4g03713 . Pslu1g21035 Lomi1g00372 Lomi2g04286 . Ecan3g02273 Soca5g02332 . Artr3g11257 . Aary13g03211 Aann4g00978 Chma7g07830 Chmo13g00916 Chmo14g00869 Chmo15g00801 Chla6g05773 Chna2g00775 Cind3g05626 Pdy4g00650 . . . . . . . . . . . . . . . . . . . . Cobi4g02979 Hean11g01003 Bial4g03248 Bial16g02647 Dapi7g00413 Dapi23g00440 Hetu32g00798 Hetu31g00742 Hetu33g00865 Amtr02g06784 Smso7g00374 Smso29g00422 Taer1g05398 Fro12g02259 Fso2g00336 . Fra11g02439 Fli1g00375 Stre6g00528 Mimi17g00546
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
. . . . . . . . . . . Pslu1g21036 . . Enbr6g02085 Ecan3g02272 Soca5g02334 . . . . . Chma7g07832 Chmo13g00915 Chmo14g00868 Chmo15g00800 . Chna2g00774 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00325 . Ceso2g03384 Cati3g00355 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00326 Sain12g00295 Ceso2g03387 Cati3g00356 . Cien5g03356 Cich4g04652 Lssa7g03619 Laca7g02947 Tako4g03718 Tamo4g02631 Pslu1g21042 Lomi1g00371 . Enbr6g00656 Ecan3g02270 Soca5g02336 . Artr3g11262 Aary5g02793 Aary13g03213 Aann4g00981 Chma7g07834 Chmo13g00914 Chmo14g00867 Chmo15g00799 . Chna2g00773 Cind3g05628 Pdy4g00646 Cobi6g01415 Hean15g04020 Bial24g02164 Bial12g02305 . . Hetu17g02367 Hetu16g02519 Hetu18g02680 Amtr02g04149 . . . . . . . . Stre9g01552 . . . . . . . . . . . . . . . . . . . . .
   
Gene_GFF
Select Chromosome Start End Strand Old_gene Gene Num
4 56146903 56149021 - chr4g0771911 Aann4g00969 969
4 56160693 56166802 - chr4g0771931 Aann4g00971 971
4 56254720 56257802 - chr4g0771971 Aann4g00975 975
4 56259329 56263649 - chr4g0771981 Aann4g00976 976
4 56267446 56271793 - chr4g0771991 Aann4g00977 977
4 56272329 56276817 - chr4g0772001 Aann4g00978 978
4 56287589 56292817 + chr4g0772031 Aann4g00981 981
5 166392368 166393524 - Aargg5g27930.1 Aary5g02793 2793
13 190028078 190035394 - Aargg13g32050.1 Aary13g03205 3205
13 190122237 190125601 - Aargg13g32080.1 Aary13g03208 3208
13 190128655 190130505 - Aargg13g32090.1 Aary13g03209 3209
13 190132857 190137069 - Aargg13g32100.1 Aary13g03210 3210
13 190138255 190140585 - Aargg13g32110.1 Aary13g03211 3211
13 190192324 190195404 + Aargg13g32130.1 Aary13g03213 3213
2 82241994 82243732 - AtrifAMIRv0_Chr02g0137451 Amtr02g04149 4149
2 122871429 122873158 - AtrifAMIRv0_Chr02g0163721 Amtr02g06776 6776
2 122906636 122911583 - AtrifAMIRv0_Chr02g0163751 Amtr02g06779 6779
2 122914541 122916929 - AtrifAMIRv0_Chr02g0163761 Amtr02g06780 6780
2 122918854 122920362 - AtrifAMIRv0_Chr02g0163771 Amtr02g06781 6781
2 122937039 122939803 - AtrifAMIRv0_Chr02g0163781 Amtr02g06782 6782
2 122991374 122994528 - AtrifAMIRv0_Chr02g0163801 Amtr02g06784 6784
1 5429903 5432234 - AmiAMIRv0_Chr01g0003061 Armi1g00306 306
1 5445985 5459461 - AmiAMIRv0_Chr01g0003071 Armi1g00307 307
1 5484497 5490518 - AmiAMIRv0_Chr01g0003081 Armi1g00308 308
1 5495102 5498335 - AmiAMIRv0_Chr01g0003091 Armi1g00309 309
1 5501827 5508373 - AmiAMIRv0_Chr01g0003101 Armi1g00310 310
1 5509934 5512334 - AmiAMIRv0_Chr01g0003111 Armi1g00311 311
1 5900010 5902578 - AmiAMIRv0_Chr01g0003251 Armi1g00325 325
1 5929591 5932646 + AmiAMIRv0_Chr01g0003261 Armi1g00326 326
3 379105352 379107466 - AtridAMIRv0_Chr03g0419641 Artr3g11228 11228
3 379188499 379197037 - AtridAMIRv0_Chr03g0419671 Artr3g11231 11231
3 379874135 379877575 - AtridAMIRv0_Chr03g0419901 Artr3g11254 11254
3 379907031 379908844 - AtridAMIRv0_Chr03g0419911 Artr3g11255 11255
3 379912081 379931065 - AtridAMIRv0_Chr03g0419921 Artr3g11256 11256
3 379932872 379935196 - AtridAMIRv0_Chr03g0419931 Artr3g11257 11257
3 380131604 380134700 + AtridAMIRv0_Chr03g0419981 Artr3g11262 11262
4 74273561 74276887 - g43084.t1 Bial4g03245 3245
4 74408206 74423929 - g43085.t1 Bial4g03246 3246
4 74429943 74433854 - g43086.t1 Bial4g03247 3247
4 74435888 74439158 - g43087.t1 Bial4g03248 3248
12 53355128 53356733 + g35504.t1 Bial12g02305 2305
16 68347628 68349527 - g149941.t1 Bial16g02641 2641
16 68451971 68460083 - g149939.t1 Bial16g02643 2643
16 68461608 68463491 - g149938.t1 Bial16g02644 2644
16 68464692 68467368 - g149937.t1 Bial16g02645 2645
16 68467394 68478712 - g149936.t1 Bial16g02646 2646
16 68479735 68482730 - g149935.t1 Bial16g02647 2647
24 52215333 52218386 + g67830.t1 Bial24g02164 2164
3 2777611 2786513 - CtAH03T0023800.1 Cati3g00339 339
3 2814994 2819657 - CtAH03T0023900.1 Cati3g00340 340
3 2820956 2828646 - CtAH03T0024000.1 Cati3g00341 341
3 2831892 2847405 - CtAH03T0024100.2 Cati3g00343 343
3 2831892 2847405 - CtAH03T0024100.4 Cati3g00345 345
3 2888516 2892546 - CtAH03T0024500.1 Cati3g00355 355
3 2908497 2911660 + CtAH03T0024600.1 Cati3g00356 356
2 84009643 84012532 - >KAJ9562764.1 Ceso2g03381 3381
2 84034946 84039033 - >KAJ9562766.1 Ceso2g03382 3382
2 84041010 84044605 - >KAJ9562765.1 Ceso2g03383 3383
2 84052922 84057275 + >KAJ9562763.1 Ceso2g03384 3384
2 84107495 84110749 + >KAJ9562832.1 Ceso2g03387 3387
6 229736508 229740519 - ClaG1_Chr06g0430191 Chla6g05772 5772
6 229741563 229743893 - ClaG1_Chr06g0430201 Chla6g05773 5773
7 267949511 267953327 - CmaNakai_Chr07g0701311 Chma7g07829 7829
7 267954902 267957226 - CmaNakai_Chr07g0701321 Chma7g07830 7830
7 267992334 267995771 + CmaNakai_Chr07g0701341 Chma7g07832 7832
7 268032368 268035408 + CmaNakai_Chr07g0701361 Chma7g07834 7834
13 47753174 47756706 - evm.model.scaffold_191.119 Chmo13g00914 914
13 47831191 47839862 - evm.model.scaffold_191.122 Chmo13g00915 915
13 47899820 47903004 + evm.model.scaffold_191.123 Chmo13g00916 916
13 47903547 47907840 + evm.model.scaffold_191.124 Chmo13g00917 917
14 42196933 42200480 - evm.model.scaffold_25.364 Chmo14g00867 867
14 42234413 42236425 - evm.model.scaffold_25.363 Chmo14g00868 868
14 42315432 42318595 + evm.model.scaffold_25.362 Chmo14g00869 869
14 42319237 42323888 + evm.model.scaffold_25.361 Chmo14g00870 870
15 45928936 45932463 - evm.model.scaffold_1806.488 Chmo15g00799 799
15 46029291 46031775 - evm.model.scaffold_1806.484 Chmo15g00800 800
15 46120427 46123607 + evm.model.scaffold_1806.482 Chmo15g00801 801
15 46124211 46128828 + evm.model.scaffold_1806.481 Chmo15g00802 802
2 58576725 58580185 - Cn0026340 Chna2g00773 773
2 58709136 58709636 - Cn0026360 Chna2g00774 774
2 58782311 58785109 + Cn0026410 Chna2g00775 775
2 58786062 58799120 + Cn0026420 Chna2g00776 776
4 134076205 134077915 - KAI3753787.1 Cich4g04652 4652
4 134103214 134106491 + KAI3753790.1 Cich4g04655 4655
4 134112118 134117887 + KAI3753792.1 Cich4g04657 4657
4 134119506 134120610 + KAI3753793.1 Cich4g04658 4658
4 134145803 134148177 + KAI3753795.1 Cich4g04660 4660
4 134149747 134155127 + KAI3753797.1 Cich4g04662 4662
4 134166256 134167646 + KAI3753798.1 Cich4g04663 4663
5 79324355 79326477 - KAI3509876.1 Cien5g03356 3356
5 79342053 79345315 + KAI3509878.1 Cien5g03358 3358
5 79351780 79355086 + KAI3509880.1 Cien5g03360 3360
5 79356249 79358023 + KAI3509881.1 Cien5g03361 3361
5 79363836 79365904 + KAI3509882.1 Cien5g03362 3362
5 79367484 79372105 + KAI3509883.1 Cien5g03363 3363
5 79395757 79397374 + KAI3509884.1 Cien5g03364 3364
3 321489159 321493049 - D.indicum_Contig84_G00057.t1 Cind3g05625 5625
3 321494003 321496333 - D.indicum_Contig84_G00058.t1 Cind3g05626 5626
3 321795889 321799481 + D.indicum_Contig84_G00060.t1 Cind3g05628 5628
4 78692083 78694164 - h2tg000009l_1.g42305.t1 Cobi4g02974 2974
4 78704746 78712842 - h2tg000009l_1.g42303.t1 Cobi4g02976 2976
4 78714147 78721771 - h2tg000009l_1.g42302.t1 Cobi4g02977 2977
4 78725363 78730565 - h2tg000009l_1.g42301.t1 Cobi4g02978 2978
4 78734128 78737173 - h2tg000009l_1.g42300.t1 Cobi4g02979 2979
6 11483464 11485551 - h2tg000021l_1.g11261.t1 Cobi6g01415 1415
7 9037458 9040431 + h1tg000030l.g77003.t1 Dapi7g00413 413
7 9044927 9047849 + h1tg000030l.g77004.t1 Dapi7g00414 414
7 9058585 9070802 + h1tg000030l.g77005.t1 Dapi7g00415 415
7 9072782 9075189 + h1tg000030l.g77006.t1 Dapi7g00416 416
7 9077649 9082552 + h1tg000030l.g77007.t1 Dapi7g00417 417
7 9111809 9113694 + h1tg000030l.g77008.t1 Dapi7g00418 418
23 9751438 9754424 + h2tg000020l.g165259.t1 Dapi23g00440 440
23 9758370 9761708 + h2tg000020l.g165258.t1 Dapi23g00441 441
23 9781153 9782859 + h2tg000020l.g165257.t1 Dapi23g00442 442
23 9784612 9787018 + h2tg000020l.g165256.t1 Dapi23g00443 443
23 9789409 9794394 + h2tg000020l.g165255.t1 Dapi23g00444 444
23 9808420 9810234 + h2tg000020l.g165254.t1 Dapi23g00445 445
3 33546641 33549154 - XM_043764883.1 Ecan3g02270 2270
3 33560132 33561459 - XM_043764181.1 Ecan3g02272 2272
3 33564155 33567025 + XM_043765611.1 Ecan3g02273 2273
3 33567609 33571969 + XM_043764683.1 Ecan3g02275 2275
3 33572986 33576398 + XM_043764984.1 Ecan3g02277 2277
3 33577916 33580900 + XM_043765411.1 Ecan3g02279 2279
3 33594949 33603651 + XM_043765252.1 Ecan3g02281 2281
3 33619766 33621790 + XM_043766233.1 Ecan3g02283 2283
6 23839271 23841597 + evm.model.ctg7030.1 Enbr6g00656 656
6 73372888 73374627 - evm.model.ctg4365.4 Enbr6g02078 2078
6 73500801 73508729 - evm.model.ctg1762.8 Enbr6g02083 2083
6 73514037 73515351 + evm.model.ctg1762.6 Enbr6g02085 2085
1 7742624 7745944 + FliAMIRv0_Chr01g0003701 Fli1g00375 375
1 7747408 7750921 + FliAMIRv0_Chr01g0003711 Fli1g00376 376
1 7789002 7790755 + FliAMIRv0_Chr01g0003761 Fli1g00381 381
1 7791814 7793307 + FliAMIRv0_Chr01g0003771 Fli1g00382 382
1 7794872 7799888 + FliAMIRv0_Chr01g0003781 Fli1g00383 383
11 78079450 78084265 - FraAMIRv0_Chr11g0224571 Fra11g02435 2435
11 78086367 78087841 - FraAMIRv0_Chr11g0224581 Fra11g02436 2436
11 78088973 78090594 - FraAMIRv0_Chr11g0224591 Fra11g02437 2437
11 78096218 78099661 - FraAMIRv0_Chr11g0224601 Fra11g02438 2438
11 78101168 78104471 - FraAMIRv0_Chr11g0224611 Fra11g02439 2439
12 29968921 29973849 - FroAMIRv0_Chr12g0218031 Fro12g02255 2255
12 29977417 29978945 - FroAMIRv0_Chr12g0218041 Fro12g02256 2256
12 29980190 29981858 - FroAMIRv0_Chr12g0218051 Fro12g02257 2257
12 29986312 29989839 - FroAMIRv0_Chr12g0218061 Fro12g02258 2258
12 29995966 29997816 - FroAMIRv0_Chr12g0218071 Fro12g02259 2259
2 4634337 4637650 + FsoAMIRv0_Chr02g0031551 Fso2g00336 336
2 4638972 4642397 + FsoAMIRv0_Chr02g0031561 Fso2g00337 337
2 4653290 4655048 + FsoAMIRv0_Chr02g0031581 Fso2g00339 339
2 4656216 4657673 + FsoAMIRv0_Chr02g0031591 Fso2g00340 340
2 4662952 4663930 + FsoAMIRv0_Chr02g0031611 Fso2g00342 342
4 119188285 119191449 - FtrAMIRv0_Chr04g0130181 Ftr4g03584 3584
4 119193059 119194533 - FtrAMIRv0_Chr04g0130191 Ftr4g03585 3585
4 119195640 119197275 - FtrAMIRv0_Chr04g0130201 Ftr4g03586 3586
4 119233485 119236968 - FtrAMIRv0_Chr04g0130211 Ftr4g03587 3587
11 25717777 25722899 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0477581 Hean11g01003 1003
11 25726162 25730906 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0477591 Hean11g01004 1004
11 25946704 25950579 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0477621 Hean11g01006 1006
11 25952239 25953848 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0477631 Hean11g01007 1007
11 25959245 25966624 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0477641 Hean11g01008 1008
11 26052059 26054751 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr11g0477661 Hean11g01009 1009
15 156687500 156689841 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0717531 Hean15g04020 4020
16 132487134 132489081 + >Htub.h1tg000461l.g312.t1 Hetu16g02519 2519
17 123780515 123782500 + >Htub.h1tg000611l.g189.t1 Hetu17g02367 2367
18 132934583 132936568 + >Htub.h2tg000269l.g201.t1 Hetu18g02680 2680
31 32192484 32197002 + >Htub.h1tg000667l.g1.t1 Hetu31g00742 742
31 32197304 32201849 + >Htub.h1tg000667l.g2.t1 Hetu31g00743 743
31 32280821 32285205 + >Htub.h1tg000667l.g3.t1 Hetu31g00744 744
31 32287246 32288781 + >Htub.h1tg000667l.g4.t1 Hetu31g00745 745
31 32309343 32315877 + >Htub.h1tg000667l.g5.t1 Hetu31g00746 746
31 32345614 32347420 + >Htub.h1tg000667l.g6.t1 Hetu31g00747 747
32 35116171 35120736 + >Htub.h1tg002251l.g87.t1 Hetu32g00798 798
32 35121945 35126031 + >Htub.h1tg002251l.g86.t1 Hetu32g00799 799
32 35179494 35184542 + >Htub.h1tg002251l.g85.t1 Hetu32g00800 800
32 35184633 35188701 + >Htub.h1tg002251l.g84.t1 Hetu32g00801 801
32 35259259 35266923 + >Htub.h1tg002251l.g83.t1 Hetu32g00802 802
32 35433192 35435128 + >Htub.h1tg002251l.g82.t1 Hetu32g00803 803
33 35313439 35317968 + >Htub.h1tg001856l.g145.t1 Hetu33g00865 865
33 35319017 35322835 + >Htub.h1tg001856l.g144.t1 Hetu33g00866 866
33 35426720 35430710 + >Htub.h1tg001856l.g143.t1 Hetu33g00867 867
33 35431142 35435555 + >Htub.h1tg001856l.g142.t1 Hetu33g00868 868
33 35441068 35448719 + >Htub.h1tg001856l.g141.t1 Hetu33g00869 869
33 35602832 35604768 + >Htub.h1tg001856l.g140.t1 Hetu33g00870 870
7 140887639 140889628 - CAI9295140.1 Laca7g02947 2947
7 140905864 140910786 + CAI9295141.1 Laca7g02948 2948
7 140915094 140921942 + CAI9295143.1 Laca7g02950 2950
7 140923494 140925524 + CAI9295144.1 Laca7g02951 2951
7 140934044 140938385 + CAI9295146.1 Laca7g02953 2953
7 140941767 140943481 + CAI9295147.1 Laca7g02954 2954
1 3318039 3320058 - LmiAMIRv0_Chr01g0003711 Lomi1g00371 371
1 3337497 3340400 + LmiAMIRv0_Chr01g0003721 Lomi1g00372 372
1 3346869 3349021 + LmiAMIRv0_Chr01g0003731 Lomi1g00373 373
1 3350387 3352178 + LmiAMIRv0_Chr01g0003741 Lomi1g00374 374
1 3353165 3361122 + LmiAMIRv0_Chr01g0003751 Lomi1g00375 375
1 3365963 3367832 + LmiAMIRv0_Chr01g0003761 Lomi1g00376 376
2 48280124 48281973 - LmiAMIRv0_Chr02g0088141 Lomi2g04281 4281
2 48284757 48290902 - LmiAMIRv0_Chr02g0088151 Lomi2g04282 4282
2 48292782 48294762 - LmiAMIRv0_Chr02g0088161 Lomi2g04283 4283
2 48296549 48298811 - LmiAMIRv0_Chr02g0088171 Lomi2g04284 4284
2 48300342 48307183 - LmiAMIRv0_Chr02g0088181 Lomi2g04285 4285
2 48308335 48311310 - LmiAMIRv0_Chr02g0088191 Lomi2g04286 4286
7 191883444 191885322 - >KAJ0196685.1 Lssa7g03619 3619
7 191935119 191938250 + >KAJ0194855.1 Lssa7g03621 3621
7 191943096 191946209 + >KAJ0196473.1 Lssa7g03623 3623
7 191948483 191950328 + >KAJ0194970.1 Lssa7g03624 3624
7 191951847 191953725 + >KAJ0195437.1 Lssa7g03625 3625
7 191959111 191964155 + >KAJ0198594.1 Lssa7g03626 3626
7 191974493 191975898 + >KAJ0195002.1 Lssa7g03630 3630
17 20155870 20161081 + KAD3066868.1 Mimi17g00546 546
17 20226850 20231095 + KAD3066870.1 Mimi17g00548 548
17 20361821 20363727 + KAD3066871.1 Mimi17g00549 549
17 20366765 20369438 + KAD3066872.1 Mimi17g00550 550
17 20384355 20399465 + KAD3066873.1 Mimi17g00551 551
17 20603035 20604770 + KAD3066876.1 Mimi17g00554 554
4 11740632 11742570 - PdyAMIRv0_Chr04g0154531 Pdy4g00646 646
4 11789319 11791687 + PdyAMIRv0_Chr04g0154571 Pdy4g00650 650
4 11798402 11802026 + PdyAMIRv0_Chr04g0154581 Pdy4g00651 651
4 11831327 11833291 + PdyAMIRv0_Chr04g0154591 Pdy4g00652 652
4 11836411 11838678 + PdyAMIRv0_Chr04g0154601 Pdy4g00653 653
4 11840300 11846172 + PdyAMIRv0_Chr04g0154611 Pdy4g00654 654
4 11865034 11866449 + PdyAMIRv0_Chr04g0154621 Pdy4g00655 655
1 151363068 151364833 - PluAMIRv0_Chr01g0209361 Pslu1g21028 21028
1 151372183 151379502 - PluAMIRv0_Chr01g0209371 Pslu1g21029 21029
1 151381040 151382765 - PluAMIRv0_Chr01g0209381 Pslu1g21030 21030
1 151383618 151385870 - PluAMIRv0_Chr01g0209391 Pslu1g21031 21031
1 151391295 151394530 - PluAMIRv0_Chr01g0209411 Pslu1g21034 21034
1 151395383 151398259 - PluAMIRv0_Chr01g0209421 Pslu1g21035 21035
1 151399500 151400815 + PluAMIRv0_Chr01g0209431 Pslu1g21036 21036
1 151438124 151440150 + PluAMIRv0_Chr01g0209491 Pslu1g21042 21042
12 5044074 5045926 - SinAMIRv0_Chr12g0358491 Sain12g00284 284
12 5055944 5064569 - SinAMIRv0_Chr12g0358501 Sain12g00285 285
12 5129526 5133191 - SinAMIRv0_Chr12g0358521 Sain12g00287 287
12 5135748 5138004 - SinAMIRv0_Chr12g0358531 Sain12g00288 288
12 5143927 5149115 - SinAMIRv0_Chr12g0358541 Sain12g00289 289
12 5155373 5158262 - SinAMIRv0_Chr12g0358551 Sain12g00290 290
12 5325413 5328541 + SinAMIRv0_Chr12g0358601 Sain12g00295 295
7 6177385 6180506 + KAI3809954.1 Smso7g00374 374
7 6198477 6199726 + KAI3809955.1 Smso7g00375 375
7 6223850 6225193 + KAI3809956.1 Smso7g00376 376
7 6245661 6250591 + KAI3809960.1 Smso7g00380 380
7 6270531 6272378 + KAI3809961.1 Smso7g00381 381
29 6305931 6309003 + KAI3675416.1 Smso29g00422 422
29 6310780 6321203 + KAI3675417.1 Smso29g00423 423
29 6322360 6323781 + KAI3675418.1 Smso29g00424 424
29 6341351 6343464 + KAI3675420.1 Smso29g00426 426
29 6384997 6386836 + KAI3675423.1 Smso29g00429 429
5 24743238 24745463 - asmbl_1924.p1 Soca5g02322 2322
5 24901433 24906211 - transfrag11011.t01 Soca5g02330 2330
5 24906552 24910055 - asmbl_1936.p1 Soca5g02332 2332
5 24922620 24924023 + augustus16587.t01 Soca5g02334 2334
5 24929245 24932288 + transfrag11014.t01 Soca5g02336 2336
6 14515684 14519725 + Streb.6G005280.1 Stre6g00528 528
6 14521554 14524921 + Streb.6G005290.1 Stre6g00529 529
6 14605790 14609316 + Streb.6G005300.1 Stre6g00530 530
6 14610655 14612800 + Streb.6G005310.1 Stre6g00531 531
6 14614125 14618600 + Streb.6G005320.1 Stre6g00532 532
6 14650977 14653341 + Streb.6G005330.1 Stre6g00533 533
9 27243020 27245445 - Streb.9G015520.1 Stre9g01552 1552
1 49480094 49486093 - >KAK1439573.1 Taer1g05393 5393
1 49487190 49488599 - >KAK1439574.1 Taer1g05394 5394
1 49492498 49493903 - >KAK1439575.1 Taer1g05395 5395
1 49497977 49501004 - >KAK1439577.1 Taer1g05397 5397
1 49501797 49504644 - >KAK1439578.1 Taer1g05398 5398
4 82877453 82879262 - TkA04G328130.1 Tako4g03708 3708
4 82969993 82981763 - TkA04G328460.1 Tako4g03709 3709
4 83008531 83012425 - TkA04G328600.1 Tako4g03713 3713
4 83056412 83058548 + TkA04G328880.1 Tako4g03718 3718
4 48847189 48848911 - TbA04G035400.1 Tamo4g02617 2617
4 48854478 48859353 - TbA04G035390.1 Tamo4g02618 2618
4 48864227 48866447 - TbA04G035370.1 Tamo4g02620 2620
4 48879449 48881729 - TbA04G035360.1 Tamo4g02621 2621
4 48883395 48886986 - TbA04G035350.1 Tamo4g02622 2622
4 48990606 48992992 + TbA04G035210.1 Tamo4g02631 2631
       
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