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AGRP

Asteraceae Genomic Research Platform

Gene Search

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Example:

Hierarchical alignments with the Arctium lappa genome as reference

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Asteraceae genomes. We used Arctium lappa as a reference, and by comparing homologous gene locus maps and Ks values between Arctium lappa and other Asteraceae, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We constructed a 74×31,441 macro-matrices.


Select Armi_1 Sain_1 Ceso_1 Cati_1 Ccar_1 Cien_1 Cich_1 Lssa_1 Laca_1 Tako_1 Tamo_1 Pslu_1 Lomi_1 Lomi_2 Enbr_1 Ecan_1 Soca_1 Glco_1 Artr_1 Aary_1 Aary_2 Aann_1 Chma_1 Chmo_1 Chmo_2 Chmo_3 Chla_1 Chna_1 Cind_1 Pdy_1 Cobi_1 Hean_1 Bial_1 Bial_2 Dapi_1 Dapi_2 Hetu_1 Hetu_2 Hetu_3 Amtr_1 Smso_1 Smso_2 Taer_1 Fro_1 Fso_1 Ftr_1 Fra_1 Fli_1 Stre_1 Mimi_1 Cobi_2 Hean_2 Bial_3 Bial_4 Dapi_3 Dapi_4 Hetu_4 Hetu_5 Hetu_6 Amtr_2 Smso_3 Smso_4 Taer_2 Fro_2 Fso_2 Ftr_2 Fra_2 Fli_2 Stre_2 Mimi_2
Armi1g00773 Sain12g00623 . . Ccar2g01876 . . Lssa7g03204 . . . Pslu1g21653 . Lomi2g04482 Enbr6g01353 Ecan3g01987 . . . . . . Chma7g08521 Chmo13g00560 Chmo14g00543 Chmo15g00403 . Chna2g00420 Cind3g02413 . . . . . . . . . . . . . . . . . . . . . Cobi4g03244 Hean16g00971 Bial4g03548 . . . Hetu48g00795 Hetu46g00864 . . . . Taer1g05630 Fro12g02477 Fso2g00188 Ftr4g03771 Fra11g02614 Fli1g00183 Stre6g00245 Mimi17g00221
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00774 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00775 Sain12g00624 Ceso2g01542 Cati3g00800 Ccar2g01875 . Cich4g04249 Lssa7g03203 Laca7g02606 Tako4g04336 Tamo4g03134 Pslu1g21654 Lomi1g00186 Lomi2g04483 Enbr6g01352 Ecan3g01985 Soca5g02883 Glco3g00110 Artr3g12185 Aary5g02908 Aary13g03456 Aann4g01355 Chma7g08523 . Chmo14g00542 Chmo15g00402 . Chna2g00419 . Pdy4g00317 . Hean4g04393 . . Dapi16g01989 . Hetu11g00369 Hetu12g00156 Hetu10g00176 . . Smso26g01968 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00776 Sain12g00625 Ceso2g01543 Cati3g00801 Ccar2g01874 . Cich4g04248 Lssa7g03202 Laca7g02603 Tako4g04338 Tamo4g03137 Pslu1g21655 Lomi1g00185 . Enbr6g01351 Ecan3g01984 Soca5g02885 Glco3g00111 Artr3g12187 Aary5g02909 Aary13g03457 Aann4g01356 Chma7g08524 Chmo13g00557 Chmo14g00540 Chmo15g00401 . Chna2g00418 Cind3g02412 Pdy4g00316 . . . . . . . . . . . . . . . . . . . . Cobi4g03245 Hean16g00968 Bial4g03550 . Dapi7g00180 Dapi23g00203 . . . Amtr01g04127 Smso7g00157 Smso29g00197 . . . . . . Stre6g00242 Mimi17g00220
Armi1g00779 Sain12g00626 Ceso2g01545 Cati3g00803 Ccar2g01873 . Cich4g04247 Lssa7g03201 Laca7g02601 Tako4g04351 . Pslu1g21656 Lomi1g00184 Lomi2g04484 Enbr6g01350 Ecan3g01983 . Glco3g00114 Artr3g12188 Aary5g02910 Aary13g03458 Aann4g01357 Chma7g08529 Chmo13g00556 Chmo14g00539 Chmo15g00399 . Chna2g00417 Cind3g02409 Pdy4g00314 . . . . . . . . . . . . . . . . . . . . Cobi4g03246 Hean16g00967 Bial4g03551 . Dapi7g00179 Dapi23g00202 Hetu48g00798 Hetu46g00867 Hetu47g00856 Amtr01g04128 Smso7g00158 Smso29g00198 . . . . . . Stre6g00241 .
Armi1g00780 Sain12g00627 Ceso2g01546 Cati3g00805 Ccar2g01872 . Cich4g04245 Lssa7g03200 Laca7g02600 Tako4g04353 Tamo4g03143 Pslu1g21657 Lomi1g00183 Lomi2g04485 Enbr6g01349 Ecan3g01980 Soca5g02888 Glco3g00116 Artr3g12191 Aary5g02914 Aary13g03461 Aann4g01379 Chma7g08534 Chmo13g00552 Chmo14g00536 Chmo15g00395 . Chna2g00415 Cind3g02407 Pdy4g00313 . . . . . . . . . . . . . . . . . . . . Cobi4g03247 Hean16g00965 Bial4g03552 . Dapi7g00178 Dapi23g00199 . . . Amtr01g04129 Smso7g00159 Smso29g00199 . . . . . . Stre6g00240 Mimi17g00218
Armi1g00781 Sain12g00628 Ceso2g01547 Cati3g00806 Ccar2g01871 . Cich4g04244 Lssa7g03197 Laca7g02598 Tako4g04372 Tamo4g03144 Pslu1g21658 Lomi1g00182 Lomi2g04486 Enbr6g01345 Ecan3g01979 Soca5g02889 Glco3g00121 Artr3g12193 Aary5g02916 Aary13g03463 Aann4g01380 Chma7g08539 Chmo13g00551 Chmo14g00533 Chmo15g00392 . Chna2g00414 Cind3g02405 Pdy4g00312 . Hean4g04394 . . Dapi16g01990 . Hetu11g00370 Hetu12g00155 Hetu10g00175 . . Smso26g01969 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi1g00785 Sain12g00632 Ceso2g01554 Cati3g00808 . . Cich4g04243 Lssa7g03196 Laca7g02597 Tako4g04373 Tamo4g03145 Pslu1g21659 Lomi1g00181 . Enbr6g01344 Ecan3g01978 Soca5g02890 Glco3g00122 Artr3g12194 Aary5g02917 Aary13g03464 Aann4g01381 . Chmo13g00550 Chmo14g00532 Chmo15g00391 . Chna2g00413 Cind3g02404 Pdy4g00310 . Hean4g04396 . . . Dapi23g00198 Hetu11g00372 Hetu12g00152 Hetu10g00173 . . Smso26g01970 . . . . . . Stre6g00237 . Cobi4g03250 Hean16g00963 Bial4g03553 . Dapi7g00177 Dapi23g00198 Hetu48g00800 Hetu46g00870 Hetu47g00859 Amtr01g04130 Smso7g00160 Smso29g00200 . . . . . . Stre6g00239 Mimi17g00217
   
Gene_GFF
Select Chromosome Start End Strand Old_gene Gene Num
4 69250111 69254926 + chr4g0783731 Aann4g01355 1355
4 69255286 69261233 + chr4g0783741 Aann4g01356 1356
4 69287757 69290214 + chr4g0783791 Aann4g01357 1357
4 70668255 70673287 + chr4g0784801 Aann4g01379 1379
4 70676928 70683717 + chr4g0784811 Aann4g01380 1380
4 70687740 70696107 + chr4g0784821 Aann4g01381 1381
5 177387525 177391015 + Aargg5g29080.1 Aary5g02908 2908
5 177417052 177421677 + Aargg5g29090.1 Aary5g02909 2909
5 177425686 177428071 + Aargg5g29100.1 Aary5g02910 2910
5 177796168 177802154 + Aargg5g29140.1 Aary5g02914 2914
5 177863467 177868335 + Aargg5g29160.1 Aary5g02916 2916
5 177869496 177874431 + Aargg5g29170.1 Aary5g02917 2917
13 207670703 207674502 + Aargg13g34560.1 Aary13g03456 3456
13 207677706 207682350 + Aargg13g34570.1 Aary13g03457 3457
13 207685674 207688178 + Aargg13g34580.1 Aary13g03458 3458
13 207807999 207812840 + Aargg13g34610.1 Aary13g03461 3461
13 207917009 207922175 + Aargg13g34630.1 Aary13g03463 3463
13 207927093 207943513 + Aargg13g34640.1 Aary13g03464 3464
1 111194658 111200922 + AtrifAMIRv0_Chr01g0041271 Amtr01g04127 4127
1 111202015 111205019 + AtrifAMIRv0_Chr01g0041281 Amtr01g04128 4128
1 111208277 111221536 + AtrifAMIRv0_Chr01g0041291 Amtr01g04129 4129
1 111261291 111266177 + AtrifAMIRv0_Chr01g0041301 Amtr01g04130 4130
1 19265048 19269486 + AmiAMIRv0_Chr01g0007731 Armi1g00773 773
1 19305148 19306113 + AmiAMIRv0_Chr01g0007741 Armi1g00774 774
1 19336733 19340098 + AmiAMIRv0_Chr01g0007751 Armi1g00775 775
1 19353832 19359864 + AmiAMIRv0_Chr01g0007761 Armi1g00776 776
1 19370817 19374219 + AmiAMIRv0_Chr01g0007791 Armi1g00779 779
1 19388673 19395719 + AmiAMIRv0_Chr01g0007801 Armi1g00780 780
1 19414593 19425277 + AmiAMIRv0_Chr01g0007811 Armi1g00781 781
1 19785899 19796027 + AmiAMIRv0_Chr01g0007851 Armi1g00785 785
3 418933775 418937261 + AtridAMIRv0_Chr03g0429211 Artr3g12185 12185
3 418944303 418948933 + AtridAMIRv0_Chr03g0429231 Artr3g12187 12187
3 418996992 418999567 + AtridAMIRv0_Chr03g0429241 Artr3g12188 12188
3 419239098 419240711 + AtridAMIRv0_Chr03g0429271 Artr3g12191 12191
3 419380384 419385612 + AtridAMIRv0_Chr03g0429291 Artr3g12193 12193
3 419411800 419417598 + AtridAMIRv0_Chr03g0429301 Artr3g12194 12194
4 80645874 80647716 + g43387.t1 Bial4g03548 3548
4 80660971 80666921 + g43389.t1 Bial4g03550 3550
4 80668616 80673222 + g43390.t1 Bial4g03551 3551
4 80675486 80683128 + g43391.t1 Bial4g03552 3552
4 80688875 80692851 + g43392.t1 Bial4g03553 3553
3 9139807 9144409 + CtAH03T0057100.1 Cati3g00800 800
3 9148065 9155444 + CtAH03T0057200.1 Cati3g00801 801
3 9185167 9188233 + CtAH03T0057400.1 Cati3g00803 803
3 9202247 9209825 + CtAH03T0057600.1 Cati3g00805 805
3 9218794 9225217 + CtAH03T0057700.1 Cati3g00806 806
3 9290692 9291717 + CtAH03T0057900.1 Cati3g00808 808
2 65127748 65137201 - gnl|WGS:LEKV|Ccrd_010917.mRNA.1_mrna Ccar2g01871 1871
2 65138773 65146140 - gnl|WGS:LEKV|Ccrd_010918.mRNA.1_mrna Ccar2g01872 1872
2 65150754 65153282 - gnl|WGS:LEKV|Ccrd_010919.mRNA.1_mrna Ccar2g01873 1873
2 65153850 65160429 - gnl|WGS:LEKV|Ccrd_010920.mRNA.1_mrna Ccar2g01874 1874
2 65166859 65170642 - gnl|WGS:LEKV|Ccrd_010921.mRNA.1_mrna Ccar2g01875 1875
2 65175420 65176243 - gnl|WGS:LEKV|Ccrd_010922.mRNA.1_mrna Ccar2g01876 1876
2 32782393 32786188 + >KAJ9560984.1 Ceso2g01542 1542
2 32796948 32805135 + >KAJ9560988.1 Ceso2g01543 1543
2 32821310 32824004 + >KAJ9560989.1 Ceso2g01545 1545
2 32827793 32833850 + >KAJ9560986.1 Ceso2g01546 1546
2 32839913 32845458 + >KAJ9560987.1 Ceso2g01547 1547
2 32992422 32999268 + >KAJ9560939.1 Ceso2g01554 1554
7 291274617 291275976 + CmaNakai_Chr07g0708231 Chma7g08521 8521
7 291287291 291290954 + CmaNakai_Chr07g0708251 Chma7g08523 8523
7 291291147 291308142 + CmaNakai_Chr07g0708261 Chma7g08524 8524
7 291361104 291363464 - CmaNakai_Chr07g0708311 Chma7g08529 8529
7 291692449 291696942 + CmaNakai_Chr07g0708361 Chma7g08534 8534
7 291762235 291767383 + CmaNakai_Chr07g0708411 Chma7g08539 8539
13 24951325 24956974 - evm.model.scaffold_694.18 Chmo13g00550 550
13 24981101 24986744 - evm.model.scaffold_694.15 Chmo13g00551 551
13 24991121 24996471 - evm.model.scaffold_694.14 Chmo13g00552 552
13 25068614 25070970 - evm.model.scaffold_694.7 Chmo13g00556 556
13 25104333 25116150 - evm.model.scaffold_694.3 Chmo13g00557 557
13 25301891 25303210 - evm.model.scaffold_3155.177 Chmo13g00560 560
14 22021086 22026692 - evm.model.scaffold_3615.26 Chmo14g00532 532
14 22162214 22167686 - evm.model.scaffold_3615.12 Chmo14g00533 533
14 22259626 22264465 - evm.model.scaffold_3615.4 Chmo14g00536 536
14 22520701 22523513 - evm.model.scaffold_735.239 Chmo14g00539 539
14 22531760 22537427 - evm.model.scaffold_735.238 Chmo14g00540 540
14 22539835 22543170 - evm.model.scaffold_735.236 Chmo14g00542 542
14 22548517 22550100 - evm.model.scaffold_735.235 Chmo14g00543 543
15 20397087 20408000 - evm.model.scaffold_6045.38 Chmo15g00391 391
15 20427462 20434492 - evm.model.scaffold_6045.39 Chmo15g00392 392
15 20515340 20520016 - evm.model.scaffold_6045.47 Chmo15g00395 395
15 20793218 20796094 - evm.model.scaffold_6045.57 Chmo15g00399 399
15 20814456 20820657 - evm.model.scaffold_6045.59 Chmo15g00401 401
15 20824028 20827995 - evm.model.scaffold_6045.60 Chmo15g00402 402
15 20840588 20842204 - evm.model.scaffold_6045.61 Chmo15g00403 403
2 25985074 25986057 - Cn0031350 Chna2g00413 413
2 26019890 26025745 - Cn0031340 Chna2g00414 414
2 26034204 26039427 - Cn0031330 Chna2g00415 415
2 26416983 26419739 - Cn0031270 Chna2g00417 417
2 26427095 26432877 - Cn0031250 Chna2g00418 418
2 26441091 26449445 - Cn0031220 Chna2g00419 419
2 26469186 26470549 - Cn0031210 Chna2g00420 420
4 124420459 124427902 - KAI3753378.1 Cich4g04243 4243
4 124433299 124437434 - KAI3753379.1 Cich4g04244 4244
4 124439954 124443309 - KAI3753380.1 Cich4g04245 4245
4 124444951 124446421 - KAI3753382.1 Cich4g04247 4247
4 124459084 124462798 - KAI3753383.1 Cich4g04248 4248
4 124465579 124467657 - KAI3753384.1 Cich4g04249 4249
3 350555838 350556788 + D.indicum_Contig231_G00053.t1 Cind3g02404 2404
3 350494558 350499739 + D.indicum_Contig231_G00054.t1 Cind3g02405 2405
3 350482358 350485977 + D.indicum_Contig231_G00056.t1 Cind3g02407 2407
3 350343922 350346427 + D.indicum_Contig231_G00058.t1 Cind3g02409 2409
3 350295954 350300522 + D.indicum_Contig231_G00061.t1 Cind3g02412 2412
3 350271928 350277273 + D.indicum_Contig231_G00062.t1 Cind3g02413 2413
4 82213590 82215139 + h2tg000064l_1.g27459.t1 Cobi4g03244 3244
4 82223735 82230132 + h2tg000064l_1.g27460.t1 Cobi4g03245 3245
4 82232619 82235567 + h2tg000064l_1.g27461.t1 Cobi4g03246 3246
4 82237331 82239503 + h2tg000064l_1.g27462.t1 Cobi4g03247 3247
4 82252894 82256646 + h2tg000064l_1.g27465.t1 Cobi4g03250 3250
7 3558275 3562181 - h1tg000136l.g124487.t1 Dapi7g00177 177
7 3567183 3572227 - h1tg000136l.g124486.t1 Dapi7g00178 178
7 3573913 3576922 - h1tg000136l.g124485.t1 Dapi7g00179 179
7 3577895 3583027 - h1tg000136l.g124484.t1 Dapi7g00180 180
16 77348569 77352150 + h1tg000026l.g56942.t1 Dapi16g01989 1989
16 77370174 77378196 + h1tg000026l.g56943.t1 Dapi16g01990 1990
23 4068221 4073395 - h2tg000064l.g12536.t1 Dapi23g00198 198
23 4087924 4093646 - h2tg000064l.g12537.t1 Dapi23g00199 199
23 4122714 4125961 - h2tg000284l.g80843.t1 Dapi23g00202 202
23 4127412 4129157 - h2tg000284l.g80842.t1 Dapi23g00203 203
3 30845633 30850411 - XM_043762707.1 Ecan3g01978 1978
3 30852774 30859176 - XM_043766283.1 Ecan3g01979 1979
3 30879545 30884664 - XM_043765292.1 Ecan3g01980 1980
3 30891433 30894796 - XM_043765097.1 Ecan3g01983 1983
3 30896524 30902635 - XM_043765666.1 Ecan3g01984 1984
3 30904748 30907906 - XM_043764670.1 Ecan3g01985 1985
3 30913625 30917676 - XM_043762692.1 Ecan3g01987 1987
6 46786302 46790046 - evm.model.ctg1607.7 Enbr6g01344 1344
6 46795522 46802891 - evm.model.ctg1607.6 Enbr6g01345 1345
6 46914298 46920512 - evm.model.ctg99.15 Enbr6g01349 1349
6 46948019 46951043 - evm.model.ctg99.14 Enbr6g01350 1350
6 46954485 46960026 - evm.model.ctg99.13 Enbr6g01351 1351
6 46971971 46975008 - evm.model.ctg99.12 Enbr6g01352 1352
6 46984544 47003045 - evm.model.ctg99.11 Enbr6g01353 1353
1 3624079 3627729 - FliAMIRv0_Chr01g0001781 Fli1g00183 183
11 79676465 79678086 + FraAMIRv0_Chr11g0226361 Fra11g02614 2614
12 32554735 32556383 + FroAMIRv0_Chr12g0220251 Fro12g02477 2477
2 2647556 2649405 + FsoAMIRv0_Chr02g0030071 Fso2g00188 188
4 121590858 121594471 + FtrAMIRv0_Chr04g0132051 Ftr4g03771 3771
3 8231753 8235287 + GcoAMIRv0_Chr03g0157391 Glco3g00110 110
3 8237867 8241754 + GcoAMIRv0_Chr03g0157401 Glco3g00111 111
3 8273015 8274671 + GcoAMIRv0_Chr03g0157431 Glco3g00114 114
3 8662551 8667224 + GcoAMIRv0_Chr03g0157451 Glco3g00116 116
3 8763084 8769506 + GcoAMIRv0_Chr03g0157501 Glco3g00121 121
3 8772535 8776773 + GcoAMIRv0_Chr03g0157511 Glco3g00122 122
4 204904532 204908931 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr04g0190201 Hean4g04393 4393
4 204913358 204923805 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr04g0190211 Hean4g04394 4394
4 204930528 204934464 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr04g0190231 Hean4g04396 4396
16 30795802 30812218 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0733861 Hean16g00963 963
16 30814655 30821698 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0733881 Hean16g00965 965
16 30849003 30851553 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0733921 Hean16g00967 967
16 30852903 30862303 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0733931 Hean16g00968 968
16 30979176 30981147 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr16g0733961 Hean16g00971 971
10 7409035 7412550 - >Htub.h1tg000798l.g519.t1 Hetu10g00173 173
10 7424352 7433333 - >Htub.h1tg000798l.g517.t1 Hetu10g00175 175
10 7506798 7509822 - >Htub.h1tg000798l.g516.t1 Hetu10g00176 176
11 11853171 11856162 + >Htub.h1tg002572l.g236.t1 Hetu11g00369 369
11 11860195 11867996 + >Htub.h1tg002572l.g237.t1 Hetu11g00370 370
11 11876442 11881927 + >Htub.h1tg002572l.g239.t1 Hetu11g00372 372
12 6379262 6384089 - >Htub.h1tg004588l.g219.t1 Hetu12g00152 152
12 6397313 6404172 + >Htub.h1tg004588l.g216.t1 Hetu12g00155 155
12 6419578 6422569 - >Htub.h1tg004588l.g215.t1 Hetu12g00156 156
46 42497688 42499388 + >Htub.h1tg000900l.g8.t1 Hetu46g00864 864
46 42574523 42576264 + >Htub.h1tg000900l.g5.t1 Hetu46g00867 867
46 42720685 42724290 + >Htub.h1tg000900l.g2.t1 Hetu46g00870 870
47 47709086 47710800 + >Htub.h1tg001955l.g77.t1 Hetu47g00856 856
47 47852251 47855798 + >Htub.h1tg001955l.g80.t1 Hetu47g00859 859
48 41018301 41019928 + >Htub.h1tg000344l.g383.t1 Hetu48g00795 795
48 41070885 41072599 + >Htub.h1tg000344l.g380.t1 Hetu48g00798 798
48 41181511 41185128 + >Htub.h1tg000344l.g378.t1 Hetu48g00800 800
7 124728149 124731445 - CAI9294779.1 Laca7g02597 2597
7 124740458 124744090 - CAI9294780.1 Laca7g02598 2598
7 124780833 124783926 - CAI9294782.1 Laca7g02600 2600
7 124784227 124786241 - CAI9294783.1 Laca7g02601 2601
7 124807014 124810310 - CAI9294785.1 Laca7g02603 2603
7 124820802 124824677 - CAI9294788.1 Laca7g02606 2606
1 1627817 1631888 - LmiAMIRv0_Chr01g0001811 Lomi1g00181 181
1 1634375 1639459 - LmiAMIRv0_Chr01g0001821 Lomi1g00182 182
1 1641477 1645049 - LmiAMIRv0_Chr01g0001831 Lomi1g00183 183
1 1649128 1651003 - LmiAMIRv0_Chr01g0001841 Lomi1g00184 184
1 1654739 1659537 - LmiAMIRv0_Chr01g0001851 Lomi1g00185 185
1 1661268 1664201 - LmiAMIRv0_Chr01g0001861 Lomi1g00186 186
2 49901511 49904047 + LmiAMIRv0_Chr02g0090151 Lomi2g04482 4482
2 49906879 49909822 + LmiAMIRv0_Chr02g0090161 Lomi2g04483 4483
2 49923689 49925393 + LmiAMIRv0_Chr02g0090171 Lomi2g04484 4484
2 49926852 49930415 + LmiAMIRv0_Chr02g0090181 Lomi2g04485 4485
2 49932142 49937465 + LmiAMIRv0_Chr02g0090191 Lomi2g04486 4486
7 169721123 169724189 - >KAJ0198424.1 Lssa7g03196 3196
7 169745827 169749375 - >KAJ0197437.1 Lssa7g03197 3197
7 169786925 169790067 - >KAJ0196861.1 Lssa7g03200 3200
7 169790378 169791451 - >KAJ0195364.1 Lssa7g03201 3201
7 169800272 169804223 - >KAJ0195829.1 Lssa7g03202 3202
7 169810422 169815391 - >KAJ0198330.1 Lssa7g03203 3203
7 169851045 169851576 - >KAJ0195050.1 Lssa7g03204 3204
17 5820780 5821286 - KAD3066539.1 Mimi17g00217 217
17 5874135 5889122 - KAD3066540.1 Mimi17g00218 218
17 5898183 5928896 - KAD3066542.1 Mimi17g00220 220
17 5953321 5956323 - KAD3066543.1 Mimi17g00221 221
4 6332485 6336493 - PdyAMIRv0_Chr04g0151181 Pdy4g00310 310
4 6341263 6348599 - PdyAMIRv0_Chr04g0151191 Pdy4g00312 312
4 6350209 6355231 - PdyAMIRv0_Chr04g0151211 Pdy4g00313 313
4 6356829 6358684 - PdyAMIRv0_Chr04g0151221 Pdy4g00314 314
4 6393167 6400056 - PdyAMIRv0_Chr04g0151241 Pdy4g00316 316
4 6406048 6408915 - PdyAMIRv0_Chr04g0151251 Pdy4g00317 317
1 155445644 155446686 + PluAMIRv0_Chr01g0215581 Pslu1g21653 21653
1 155447734 155450593 + PluAMIRv0_Chr01g0215591 Pslu1g21654 21654
1 155452175 155458045 + PluAMIRv0_Chr01g0215601 Pslu1g21655 21655
1 155460138 155461919 + PluAMIRv0_Chr01g0215611 Pslu1g21656 21656
1 155464304 155467932 + PluAMIRv0_Chr01g0215621 Pslu1g21657 21657
1 155473902 155479117 + PluAMIRv0_Chr01g0215631 Pslu1g21658 21658
1 155483724 155488205 + PluAMIRv0_Chr01g0215641 Pslu1g21659 21659
12 14362003 14364663 + SinAMIRv0_Chr12g0361871 Sain12g00623 623
12 14372326 14377321 + SinAMIRv0_Chr12g0361881 Sain12g00624 624
12 14392352 14399460 + SinAMIRv0_Chr12g0361891 Sain12g00625 625
12 14401191 14403393 + SinAMIRv0_Chr12g0361901 Sain12g00626 626
12 14412780 14417711 + SinAMIRv0_Chr12g0361911 Sain12g00627 627
12 14429519 14433765 + SinAMIRv0_Chr12g0361921 Sain12g00628 628
12 14566835 14573588 + SinAMIRv0_Chr12g0361961 Sain12g00632 632
7 2804826 2811909 + KAI3809737.1 Smso7g00157 157
7 2813161 2816452 + KAI3809738.1 Smso7g00158 158
7 2820498 2826141 + KAI3809739.1 Smso7g00159 159
7 2830985 2834705 + KAI3809740.1 Smso7g00160 160
26 42604584 42607543 + KAI3695453.1 Smso26g01968 1968
26 42611714 42623257 + KAI3695454.1 Smso26g01969 1969
26 42625677 42640149 + KAI3695455.1 Smso26g01970 1970
29 3165341 3176172 + KAI3675191.1 Smso29g00197 197
29 3178579 3181818 + KAI3675192.1 Smso29g00198 198
29 3184749 3190258 + KAI3675193.1 Smso29g00199 199
29 3194744 3198289 + KAI3675194.1 Smso29g00200 200
5 31932823 31937342 + asmbl_5667.p1 Soca5g02883 2883
5 31941285 31951783 + transfrag31940.t02 Soca5g02885 2885
5 32001118 32006572 + transfrag31937.t01 Soca5g02888 2888
5 32010317 32018453 + augustus47743.t01 Soca5g02889 2889
5 32034351 32039664 + augustus47742.t01 Soca5g02890 2890
6 6454313 6455134 + Streb.6G002370.1 Stre6g00237 237
6 6474626 6482561 - Streb.6G002390.1 Stre6g00239 239
6 6484054 6488772 - Streb.6G002400.1 Stre6g00240 240
6 6490697 6493612 - Streb.6G002410.1 Stre6g00241 241
6 6494949 6508090 - Streb.6G002420.1 Stre6g00242 242
6 6589871 6591912 - Streb.6G002450.1 Stre6g00245 245
1 51246187 51248850 + >KAK1439809.1 Taer1g05630 5630
4 99145633 99148082 + TkA04G394270.2 Tako4g04336 4336
4 99240481 99244480 + TkA04G394630.1 Tako4g04338 4338
4 99500631 99503764 + TkA04G395470.1 Tako4g04351 4351
4 99505979 99509047 + TkA04G395500.1 Tako4g04353 4353
4 100429615 100433899 + TkA04G399270.1 Tako4g04372 4372
4 100443256 100450185 + TkA04G399310.1 Tako4g04373 4373
4 60422415 60425257 + TbA04G021360.1 Tamo4g03134 3134
4 60451899 60455996 + TbA04G021300.1 Tamo4g03137 3137
4 60655622 60658729 + TbA04G021120.1 Tamo4g03143 3143
4 60660219 60664097 + TbA04G021110.1 Tamo4g03144 3144
4 60680680 60685728 + TbA04G021090.1 Tamo4g03145 3145
       
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