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AGRP

Asteraceae Genomic Research Platform

Gene Search

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Example:

Hierarchical alignments with the Arctium lappa genome as reference

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Asteraceae genomes. We used Arctium lappa as a reference, and by comparing homologous gene locus maps and Ks values between Arctium lappa and other Asteraceae, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We constructed a 74×31,441 macro-matrices.


Select Armi_1 Sain_1 Ceso_1 Cati_1 Ccar_1 Cien_1 Cich_1 Lssa_1 Laca_1 Tako_1 Tamo_1 Pslu_1 Lomi_1 Lomi_2 Enbr_1 Ecan_1 Soca_1 Glco_1 Artr_1 Aary_1 Aary_2 Aann_1 Chma_1 Chmo_1 Chmo_2 Chmo_3 Chla_1 Chna_1 Cind_1 Pdy_1 Cobi_1 Hean_1 Bial_1 Bial_2 Dapi_1 Dapi_2 Hetu_1 Hetu_2 Hetu_3 Amtr_1 Smso_1 Smso_2 Taer_1 Fro_1 Fso_1 Ftr_1 Fra_1 Fli_1 Stre_1 Mimi_1 Cobi_2 Hean_2 Bial_3 Bial_4 Dapi_3 Dapi_4 Hetu_4 Hetu_5 Hetu_6 Amtr_2 Smso_3 Smso_4 Taer_2 Fro_2 Fso_2 Ftr_2 Fra_2 Fli_2 Stre_2 Mimi_2
Armi18g00019 Sain8g02001 . . Ccar5g01593 Cien7g02595 Cich8g01710 Lssa3g03640 Laca3g02878 Tako6g03056 Tamo6g02622 Pslu2g13757 Lomi6g01934 Lomi7g01706 Enbr1g09144 Ecan8g02692 Soca4g03415 Glco7g02127 . . . . Chma3g03703 Chmo25g01507 Chmo26g01628 Chmo27g01468 . Chna8g01047 Cind9g03657 Pdy3g03119 Cobi3g02274 Hean15g01350 Bial14g01327 . Dapi30g00582 Dapi14g00557 Hetu43g01423 Hetu45g01458 . . . . Taer5g00699 Fro11g01647 Fso10g02387 Ftr12g02553 Fra7g01733 Fli2g01935 . Mimi1g01858 . . . . . . . . . . . . . . . . . . . .
Armi18g00018 . . . Ccar5g01592 Cien7g02597 Cich8g01712 Lssa3g03641 Laca3g02879 Tako6g03058 Tamo6g02625 Pslu2g13740 Lomi6g01933 Lomi7g01705 Enbr1g09143 Ecan8g02693 Soca4g03418 Glco7g02134 . . . . Chma3g03706 Chmo25g01509 Chmo26g01629 Chmo27g01471 . Chna8g01048 Cind9g03656 Pdy3g03120 Cobi3g02275 Hean15g01351 Bial14g01326 . Dapi30g00581 Dapi14g00556 Hetu43g01424 Hetu45g01459 . Amtr08g04017 Smso2g02257 . Taer5g00698 Fro11g01646 Fso10g02388 Ftr12g02554 Fra7g01734 Fli2g01934 . Mimi1g01859 . . . . . . . . . . . . . . . . . . . .
Armi18g00017 Sain8g01999 . . Ccar5g01591 Cien7g02598 Cich8g01713 Lssa3g03643 Laca3g02882 . Tamo6g02627 Pslu2g13722 . Lomi7g01704 Enbr1g09142 Ecan8g02694 Soca4g03419 Glco7g02138 . . . . Chma3g03708 . Chmo26g01630 . . Chna8g01053 Cind9g03655 Pdy3g03121 Cobi3g02278 Hean15g01353 Bial14g01320 . Dapi30g00580 Dapi14g00553 Hetu43g01426 Hetu45g01462 . Amtr08g04018 Smso2g02229 . . . . . . . Stre11g01659 Mimi1g01860 . . . . . . . . . . . . . . . . . . . .
Armi18g00016 Sain8g01998 . . . Cien7g02599 Cich8g01714 Lssa3g03644 Laca3g02885 Tako6g03063 Tamo6g02630 Pslu2g13721 . Lomi7g01703 Enbr1g09141 Ecan8g02695 Soca4g03430 Glco7g02139 . . . . Chma3g03712 Chmo25g01512 Chmo26g01632 Chmo27g01473 . Chna8g01055 Cind9g03654 Pdy3g03122 Cobi3g02279 Hean15g01356 Bial14g01319 . Dapi30g00579 Dapi14g00552 Hetu43g01427 Hetu45g01463 . Amtr08g04019 Smso2g02353 . Taer5g00695 Fro11g01643 Fso10g02391 Ftr12g02555 Fra7g01737 Fli2g01929 Stre11g01660 Mimi1g01862 . . . . . . . . . . . . . . . . . . . .
Armi18g00015 Sain8g01996 . . Ccar5g01590 Cien7g02605 Cich8g01727 Lssa3g03658 . . Tamo6g02639 Pslu2g13717 Lomi6g01932 Lomi7g01701 Enbr1g09139 Ecan8g02697 Soca4g03431 . . . . . Chma3g03714 Chmo25g01516 Chmo26g01635 Chmo27g01474 . Chna8g01056 Cind9g03653 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi18g00014 Sain8g01995 . . Ccar5g01589 Cien7g02606 Cich8g01728 Lssa3g03659 . Tako6g03071 Tamo6g02640 Pslu2g13714 Lomi6g01930 Lomi7g01699 Enbr1g09136 Ecan8g02699 Soca4g03432 Glco7g02149 . . . . Chma3g03745 Chmo25g01522 Chmo26g01646 Chmo27g01476 . Chna8g01059 Cind9g03650 Pdy3g03124 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi18g00013 Sain8g01993 . . Ccar5g01588 Cien7g02609 Cich8g01731 Lssa3g03662 . Tako6g03075 . Pslu2g13707 Lomi6g01929 Lomi7g01698 Enbr1g09013 Ecan8g02701 Soca4g03434 Glco7g02152 . . . . Chma3g03746 Chmo25g01525 Chmo26g01650 Chmo27g01482 Chla9g03255 Chna8g01060 Cind9g03649 Pdy3g03125 Cobi3g02281 Hean15g01360 Bial14g01314 . Dapi30g00575 Dapi14g00547 Hetu43g01429 Hetu45g01468 . Amtr08g04029 Smso2g02224 Smso23g01195 Taer5g00692 Fro11g01640 Fso10g02394 Ftr12g02558 Fra7g01740 Fli2g01927 Stre11g01664 Mimi1g01865 . . . . . . . . . . . . . . . . . . . .
. Sain8g01992 . . Ccar5g01587 . . . . . . . . . Enbr1g09010 Ecan8g02703 Soca4g03436 . . . . . . Chmo25g01528 Chmo26g01654 Chmo27g01488 Chla9g03252 Chna8g01063 Cind9g03640 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi18g00012 Sain8g01991 . . Ccar5g01586 Cien7g02618 . Lssa3g03667 Laca3g02887 Tako6g03098 Tamo6g02651 Pslu2g13674 Lomi6g01924 Lomi7g01695 Enbr1g09008 Ecan8g02707 Soca4g03440 Glco7g02158 . . . . . Chmo25g01530 Chmo26g01656 Chmo27g01490 Chla9g03250 Chna8g01065 Cind9g03638 Pdy3g03130 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Armi18g00011 Sain8g01990 . . . Cien7g02619 . Lssa3g03668 Laca3g02888 Tako6g03099 Tamo6g02652 . Lomi6g01923 . Enbr1g09117 Ecan8g02709 Soca4g03442 Glco7g02159 . . . . . Chmo25g01531 Chmo26g01657 Chmo27g01491 Chla9g03249 Chna8g01066 Cind9g03637 Pdy3g03131 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
   
Gene_GFF
Select Chromosome Start End Strand Old_gene Gene Num
8 107879251 107886538 + AtrifAMIRv0_Chr08g0555991 Amtr08g04017 4017
8 107889828 107892990 - AtrifAMIRv0_Chr08g0556001 Amtr08g04018 4018
8 107901504 107905491 - AtrifAMIRv0_Chr08g0556011 Amtr08g04019 4019
8 108017198 108019791 - AtrifAMIRv0_Chr08g0556111 Amtr08g04029 4029
18 272229 275294 + AmiAMIRv0_Chr18g0469441 Armi18g00011 11
18 276265 280920 - AmiAMIRv0_Chr18g0469451 Armi18g00012 12
18 284163 287590 - AmiAMIRv0_Chr18g0469461 Armi18g00013 13
18 289549 290330 + AmiAMIRv0_Chr18g0469471 Armi18g00014 14
18 290849 292823 - AmiAMIRv0_Chr18g0469481 Armi18g00015 15
18 297568 300358 + AmiAMIRv0_Chr18g0469491 Armi18g00016 16
18 300774 303128 + AmiAMIRv0_Chr18g0469501 Armi18g00017 17
18 304058 312666 - AmiAMIRv0_Chr18g0469511 Armi18g00018 18
18 314529 316124 - AmiAMIRv0_Chr18g0469521 Armi18g00019 19
14 23775147 23780707 - g101420.t1 Bial14g01314 1314
14 23957429 23961575 + g101425.t1 Bial14g01319 1319
14 23962674 23963472 + g101426.t1 Bial14g01320 1320
14 24206836 24211622 - g101432.t1 Bial14g01326 1326
14 24262262 24265120 - g101433.t1 Bial14g01327 1327
5 36975490 36976527 - gnl|WGS:LEKV|Ccrd_019281.mRNA.1_mrna Ccar5g01586 1586
5 36977636 36978007 + gnl|WGS:LEKV|Ccrd_019282.mRNA.1_mrna Ccar5g01587 1587
5 36978219 36981652 - gnl|WGS:LEKV|Ccrd_019283.mRNA.1_mrna Ccar5g01588 1588
5 36982762 36983833 + gnl|WGS:LEKV|Ccrd_019284.mRNA.1_mrna Ccar5g01589 1589
5 36984256 36986442 - gnl|WGS:LEKV|Ccrd_019285.mRNA.1_mrna Ccar5g01590 1590
5 36988709 36994364 + gnl|WGS:LEKV|Ccrd_019286.mRNA.1_mrna Ccar5g01591 1591
5 36994608 37002672 - gnl|WGS:LEKV|Ccrd_019287.mRNA.1_mrna Ccar5g01592 1592
5 37004422 37006379 - gnl|WGS:LEKV|Ccrd_019288.mRNA.1_mrna Ccar5g01593 1593
9 111625396 111627502 + ClaG1_Chr09g0612101 Chla9g03249 3249
9 111635801 111640162 - ClaG1_Chr09g0612111 Chla9g03250 3250
9 111691410 111692424 + ClaG1_Chr09g0612131 Chla9g03252 3252
9 111748365 111752397 - ClaG1_Chr09g0612161 Chla9g03255 3255
3 153910392 153913477 + CmaNakai_Chr03g0266631 Chma3g03703 3703
3 154002785 154008135 + CmaNakai_Chr03g0266661 Chma3g03706 3706
3 154011773 154014858 - CmaNakai_Chr03g0266681 Chma3g03708 3708
3 154140857 154142175 - CmaNakai_Chr03g0266721 Chma3g03712 3712
3 154244188 154247149 + CmaNakai_Chr03g0266741 Chma3g03714 3714
3 155046669 155048436 - CmaNakai_Chr03g0267051 Chma3g03745 3745
3 155068013 155071165 + CmaNakai_Chr03g0267061 Chma3g03746 3746
25 126046810 126049488 + evm.model.scaffold_1102.17 Chmo25g01507 1507
25 126326011 126331627 + evm.model.scaffold_1102.30 Chmo25g01509 1509
25 126471111 126475894 - evm.model.scaffold_1102.41 Chmo25g01512 1512
25 127442169 127443370 + evm.model.scaffold_1102.88 Chmo25g01516 1516
25 127505827 127508190 - evm.model.scaffold_1102.98 Chmo25g01522 1522
25 127783549 127786737 + evm.model.scaffold_1102.104 Chmo25g01525 1525
25 127846079 127847665 - evm.model.scaffold_1102.110 Chmo25g01528 1528
25 127862149 127866951 + evm.model.scaffold_1102.112 Chmo25g01530 1530
25 127867948 127870525 - evm.model.scaffold_1102.113 Chmo25g01531 1531
26 135444081 135446794 + evm.model.scaffold_517.125 Chmo26g01628 1628
26 135475497 135481653 + evm.model.scaffold_517.124 Chmo26g01629 1629
26 135489383 135500548 - evm.model.scaffold_517.123 Chmo26g01630 1630
26 135537394 135542941 - evm.model.scaffold_517.120 Chmo26g01632 1632
26 135642789 135646202 + evm.model.scaffold_517.116 Chmo26g01635 1635
26 136547889 136549909 - evm.model.scaffold_517.68 Chmo26g01646 1646
26 136628371 136631716 + evm.model.scaffold_517.63 Chmo26g01650 1650
26 136693072 136694619 - evm.model.scaffold_517.58 Chmo26g01654 1654
26 136731362 136736024 + evm.model.scaffold_517.56 Chmo26g01656 1656
26 136742699 136744722 - evm.model.scaffold_517.55 Chmo26g01657 1657
27 113696271 113699075 + evm.model.scaffold_5019.9 Chmo27g01468 1468
27 113811556 113817157 + evm.model.scaffold_5019.3 Chmo27g01471 1471
27 114171632 114176425 - evm.model.scaffold_1914.2 Chmo27g01473 1473
27 114222258 114225262 + evm.model.scaffold_1914.3 Chmo27g01474 1474
27 114502866 114508345 - evm.model.scaffold_1914.13 Chmo27g01476 1476
27 114608325 114611099 + evm.model.scaffold_1914.22 Chmo27g01482 1482
27 114733634 114735220 - evm.model.scaffold_1914.34 Chmo27g01488 1488
27 114748887 114753747 + evm.model.scaffold_1914.36 Chmo27g01490 1490
27 114760090 114762594 - evm.model.scaffold_1914.37 Chmo27g01491 1491
8 101809531 101812139 + Cn0734940 Chna8g01047 1047
8 101850799 101861648 + Cn0734930 Chna8g01048 1048
8 101953786 101954800 - Cn0734840 Chna8g01053 1053
8 101986092 101990865 - Cn0734810 Chna8g01055 1055
8 102046780 102049940 + Cn0734800 Chna8g01056 1056
8 102182816 102184622 - Cn0734770 Chna8g01059 1059
8 102258254 102261852 + Cn0734760 Chna8g01060 1060
8 102340426 102342131 - Cn0734690 Chna8g01063 1063
8 102401096 102406145 + Cn0734670 Chna8g01065 1065
8 102406611 102409417 - Cn0734660 Chna8g01066 1066
8 57158265 57160097 + KAI3699956.1 Cich8g01710 1710
8 57187152 57190107 + KAI3699958.1 Cich8g01712 1712
8 57217603 57220404 - KAI3699959.1 Cich8g01713 1713
8 57223463 57227773 - KAI3699960.1 Cich8g01714 1714
8 57444834 57447571 + KAI3699973.1 Cich8g01727 1727
8 57448276 57449636 - KAI3699974.1 Cich8g01728 1728
8 57522471 57525840 + KAI3699977.1 Cich8g01731 1731
7 40181865 40183687 + KAI3503620.1 Cien7g02595 2595
7 40200573 40203638 + KAI3503622.1 Cien7g02597 2597
7 40222205 40225381 - KAI3503623.1 Cien7g02598 2598
7 40227250 40231438 - KAI3503624.1 Cien7g02599 2599
7 40327121 40329994 + KAI3503630.1 Cien7g02605 2605
7 40330476 40332120 - KAI3503631.1 Cien7g02606 2606
7 40358746 40361344 + KAI3503634.1 Cien7g02609 2609
7 40697180 40701088 + KAI3503643.1 Cien7g02618 2618
7 40705953 40706983 - KAI3503644.1 Cien7g02619 2619
9 154287167 154289261 - D.indicum_Contig59_G00064.t1 Cind9g03637 3637
9 154281703 154285935 + D.indicum_Contig59_G00065.t1 Cind9g03638 3638
9 154228235 154230582 - D.indicum_Contig59_G00067.t1 Cind9g03640 3640
9 154116606 154119726 + D.indicum_Contig59_G00076.t1 Cind9g03649 3649
9 154071713 154073179 - D.indicum_Contig59_G00077.t1 Cind9g03650 3650
9 153935266 153938316 + D.indicum_Contig59_G00080.t1 Cind9g03653 3653
9 153868692 153873782 - D.indicum_Contig59_G00081.t1 Cind9g03654 3654
9 153855581 153858683 - D.indicum_Contig59_G00082.t1 Cind9g03655 3655
9 153761006 153765916 + D.indicum_Contig59_G00083.t1 Cind9g03656 3656
9 153704518 153706991 + D.indicum_Contig59_G00084.t1 Cind9g03657 3657
3 70697759 70699908 + h2tg000002l_1.g22297.t1 Cobi3g02274 2274
3 70722210 70726398 + h2tg000002l_1.g22296.t1 Cobi3g02275 2275
3 70776494 70779100 - h2tg000002l_1.g22293.t1 Cobi3g02278 2278
3 70780378 70789119 - h2tg000002l_1.g22292.t1 Cobi3g02279 2279
3 70850542 70856041 + h2tg000002l_1.g22290.t1 Cobi3g02281 2281
14 9775058 9775716 - h2tg000265l.g78847.t1 Dapi14g00547 547
14 9963117 9969175 + h2tg000265l.g78842.t1 Dapi14g00552 552
14 9971056 9978834 + h2tg000265l.g78841.t1 Dapi14g00553 553
14 9999770 10003287 - h2tg000265l.g78838.t1 Dapi14g00556 556
14 10011730 10017410 - h2tg000265l.g78837.t1 Dapi14g00557 557
30 9711982 9714547 - h1tg000008l.g131285.t1 Dapi30g00575 575
30 9865868 9872947 + h1tg000008l.g131289.t1 Dapi30g00579 579
30 9874851 9878087 + h1tg000008l.g131290.t1 Dapi30g00580 580
30 9895266 9898725 - h1tg000008l.g131291.t1 Dapi30g00581 581
30 9907033 9912896 - h1tg000008l.g131292.t1 Dapi30g00582 582
8 37836007 37838885 + XM_043750971.1 Ecan8g02692 2692
8 37841378 37847806 + XM_043751749.1 Ecan8g02693 2693
8 37849980 37853286 - XM_043752627.1 Ecan8g02694 2694
8 37860917 37866061 - XM_043752141.1 Ecan8g02695 2695
8 37871188 37873993 + XM_043750864.1 Ecan8g02697 2697
8 37887384 37889737 + XM_043752303.1 Ecan8g02699 2699
8 37905901 37909485 + XM_043752770.1 Ecan8g02701 2701
8 37918870 37920194 - XM_043782637.1 Ecan8g02703 2703
8 37953271 37958529 + XM_043749916.1 Ecan8g02707 2707
8 37969831 37972306 - XM_043750526.1 Ecan8g02709 2709
1 279284573 279288311 - evm.model.ctg136.2 Enbr1g09008 9008
1 279319163 279323402 + evm.model.ctg136.4 Enbr1g09010 9010
1 279361931 279365403 - evm.model.ctg136.7 Enbr1g09013 9013
1 283085259 283087776 - evm.model.ctg3325.1 Enbr1g09117 9117
1 283420682 283423307 - evm.model.ctg938.9 Enbr1g09136 9136
1 283499440 283502027 - evm.model.ctg938.5 Enbr1g09139 9139
1 283509524 283514278 + evm.model.ctg938.3 Enbr1g09141 9141
1 283521082 283524284 + evm.model.ctg938.2 Enbr1g09142 9142
1 283527245 283532779 - evm.model.ctg938.1 Enbr1g09143 9143
1 283630815 283633180 - evm.model.ctg1541.10 Enbr1g09144 9144
2 35258129 35260574 - FliAMIRv0_Chr02g0053511 Fli2g01927 1927
2 35290274 35299693 + FliAMIRv0_Chr02g0053531 Fli2g01929 1929
2 35379183 35383888 - FliAMIRv0_Chr02g0053581 Fli2g01934 1934
2 35387551 35390122 - FliAMIRv0_Chr02g0053591 Fli2g01935 1935
7 74676207 74678714 + FraAMIRv0_Chr07g0115971 Fra7g01733 1733
7 74682295 74686992 + FraAMIRv0_Chr07g0115981 Fra7g01734 1734
7 74711319 74718647 - FraAMIRv0_Chr07g0116011 Fra7g01737 1737
7 74733595 74736020 + FraAMIRv0_Chr07g0116041 Fra7g01740 1740
11 14862848 14865295 - FroAMIRv0_Chr11g0176841 Fro11g01640 1640
11 14883995 14890898 + FroAMIRv0_Chr11g0176871 Fro11g01643 1643
11 14911887 14916641 - FroAMIRv0_Chr11g0176901 Fro11g01646 1646
11 14923485 14925444 - FroAMIRv0_Chr11g0176911 Fro11g01647 1647
10 65890413 65892882 + FsoAMIRv0_Chr10g0241031 Fso10g02387 2387
10 65898065 65902327 + FsoAMIRv0_Chr10g0241041 Fso10g02388 2388
10 65933907 65940867 - FsoAMIRv0_Chr10g0241071 Fso10g02391 2391
10 65960786 65963183 + FsoAMIRv0_Chr10g0241101 Fso10g02394 2394
12 89024408 89026685 + FtrAMIRv0_Chr12g0356631 Ftr12g02553 2553
12 89031297 89035925 + FtrAMIRv0_Chr12g0356641 Ftr12g02554 2554
12 89084676 89091485 - FtrAMIRv0_Chr12g0356651 Ftr12g02555 2555
12 89115868 89118261 + FtrAMIRv0_Chr12g0356681 Ftr12g02558 2558
7 347396555 347398790 + GcoAMIRv0_Chr07g0469121 Glco7g02127 2127
7 347633936 347639616 + GcoAMIRv0_Chr07g0469191 Glco7g02134 2134
7 348317503 348320595 - GcoAMIRv0_Chr07g0469231 Glco7g02138 2138
7 348324301 348327953 - GcoAMIRv0_Chr07g0469241 Glco7g02139 2139
7 349873266 349875836 - GcoAMIRv0_Chr07g0469341 Glco7g02149 2149
7 350125918 350129169 + GcoAMIRv0_Chr07g0469371 Glco7g02152 2152
7 350450184 350453403 + GcoAMIRv0_Chr07g0469431 Glco7g02158 2158
7 350454579 350456790 - GcoAMIRv0_Chr07g0469441 Glco7g02159 2159
15 33056175 33060422 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0686361 Hean15g01350 1350
15 33098377 33105198 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0686371 Hean15g01351 1351
15 33125266 33129013 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0686391 Hean15g01353 1353
15 33136269 33142867 - gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0686421 Hean15g01356 1356
15 33201664 33205168 + gnl|WGS:MNCJ|mrna.Hean1vXRQr2_Chr15g0686461 Hean15g01360 1360
43 98685451 98691012 + >Htub.h1tg003716l.g214.t1 Hetu43g01423 1423
43 98757574 98762970 + >Htub.h1tg003716l.g213.t1 Hetu43g01424 1424
43 98815145 98818686 - >Htub.h1tg001098l.g50.t1 Hetu43g01426 1426
43 98820557 98828302 - >Htub.h1tg001098l.g51.t1 Hetu43g01427 1427
43 99087157 99090156 + >Htub.h1tg001098l.g53.t1 Hetu43g01429 1429
45 95130700 95132351 + >Htub.h1tg003389l.g228.t1 Hetu45g01458 1458
45 95138594 95145706 + >Htub.h1tg003389l.g229.t1 Hetu45g01459 1459
45 95200455 95203309 - >Htub.h1tg003389l.g232.t1 Hetu45g01462 1462
45 95208732 95213518 - >Htub.h1tg003389l.g233.t1 Hetu45g01463 1463
45 95418601 95419049 + >Htub.h1tg003389l.g238.t1 Hetu45g01468 1468
3 122146584 122149101 + CAI9277244.1 Laca3g02878 2878
3 122197780 122202710 + CAI9277245.1 Laca3g02879 2879
3 122402500 122405325 - CAI9277248.1 Laca3g02882 2882
3 122511504 122515487 - CAI9277251.1 Laca3g02885 2885
3 123444376 123448013 + CAI9277254.1 Laca3g02887 2887
3 123516161 123518145 - CAI9277255.1 Laca3g02888 2888
6 27135910 27138093 + LmiAMIRv0_Chr06g0205611 Lomi6g01923 1923
6 27145565 27149545 - LmiAMIRv0_Chr06g0205621 Lomi6g01924 1924
6 27194357 27197818 + LmiAMIRv0_Chr06g0205671 Lomi6g01929 1929
6 27201433 27203749 + LmiAMIRv0_Chr06g0205681 Lomi6g01930 1930
6 27208462 27211233 - LmiAMIRv0_Chr06g0205701 Lomi6g01932 1932
6 27224009 27229276 - LmiAMIRv0_Chr06g0205711 Lomi6g01933 1933
6 27234980 27237930 - LmiAMIRv0_Chr06g0205721 Lomi6g01934 1934
7 27294707 27299115 - LmiAMIRv0_Chr07g0231651 Lomi7g01695 1695
7 27343434 27347012 + LmiAMIRv0_Chr07g0231681 Lomi7g01698 1698
7 27350126 27351522 + LmiAMIRv0_Chr07g0231691 Lomi7g01699 1699
7 27366047 27369557 - LmiAMIRv0_Chr07g0231711 Lomi7g01701 1701
7 27412283 27416621 + LmiAMIRv0_Chr07g0231731 Lomi7g01703 1703
7 27419504 27422639 + LmiAMIRv0_Chr07g0231741 Lomi7g01704 1704
7 27439857 27444546 - LmiAMIRv0_Chr07g0231751 Lomi7g01705 1705
7 27457031 27459970 - LmiAMIRv0_Chr07g0231761 Lomi7g01706 1706
3 213693155 213695483 + >KAJ0216374.1 Lssa3g03640 3640
3 213818643 213824292 + >KAJ0218160.1 Lssa3g03641 3641
3 213887918 213890533 - >KAJ0216908.1 Lssa3g03643 3643
3 214099258 214102047 - >KAJ0218620.1 Lssa3g03644 3644
3 214883614 214886242 + >KAJ0215074.1 Lssa3g03658 3658
3 214886536 214887994 - >KAJ0216866.1 Lssa3g03659 3659
3 215388661 215392373 + >KAJ0217726.1 Lssa3g03662 3662
3 216169886 216174355 + >KAJ0217860.1 Lssa3g03667 3667
3 216182984 216184878 - >KAJ0218581.1 Lssa3g03668 3668
1 89884129 89887749 + KAD7478722.1 Mimi1g01858 1858
1 89891797 89896326 + KAD7478723.1 Mimi1g01859 1859
1 89931678 89940230 - KAD7478724.1 Mimi1g01860 1860
1 89959781 89968515 - KAD7478726.1 Mimi1g01862 1862
1 90031060 90033621 + KAD7478729.1 Mimi1g01865 1865
3 89037325 89039465 + PdyAMIRv0_Chr03g0129581 Pdy3g03119 3119
3 89045977 89050591 + PdyAMIRv0_Chr03g0129591 Pdy3g03120 3120
3 89068266 89070722 - PdyAMIRv0_Chr03g0129601 Pdy3g03121 3121
3 89072942 89079551 - PdyAMIRv0_Chr03g0129611 Pdy3g03122 3122
3 89101269 89102206 - PdyAMIRv0_Chr03g0129631 Pdy3g03124 3124
3 89108166 89111885 + PdyAMIRv0_Chr03g0129641 Pdy3g03125 3125
3 89160821 89164042 + PdyAMIRv0_Chr03g0129691 Pdy3g03130 3130
3 89165081 89166668 - PdyAMIRv0_Chr03g0129701 Pdy3g03131 3131
2 101983843 101987778 - PluAMIRv0_Chr02g0357201 Pslu2g13674 13674
2 102214801 102218267 + PluAMIRv0_Chr02g0357521 Pslu2g13707 13707
2 102257678 102259030 + PluAMIRv0_Chr02g0357591 Pslu2g13714 13714
2 102270611 102273787 - PluAMIRv0_Chr02g0357621 Pslu2g13717 13717
2 102296670 102301587 + PluAMIRv0_Chr02g0357661 Pslu2g13721 13721
2 102305349 102308730 + PluAMIRv0_Chr02g0357671 Pslu2g13722 13722
2 102446056 102451011 - PluAMIRv0_Chr02g0357851 Pslu2g13740 13740
2 102578269 102581371 - PluAMIRv0_Chr02g0358021 Pslu2g13757 13757
8 133246576 133249086 + SinAMIRv0_Chr08g0197231 Sain8g01990 1990
8 133249854 133253664 - SinAMIRv0_Chr08g0197241 Sain8g01991 1991
8 133256058 133257348 + SinAMIRv0_Chr08g0197251 Sain8g01992 1992
8 133257709 133260796 - SinAMIRv0_Chr08g0197261 Sain8g01993 1993
8 133597743 133598508 + SinAMIRv0_Chr08g0197281 Sain8g01995 1995
8 133599436 133601350 - SinAMIRv0_Chr08g0197291 Sain8g01996 1996
8 133876855 133879495 + SinAMIRv0_Chr08g0197311 Sain8g01998 1998
8 133880081 133882196 + SinAMIRv0_Chr08g0197321 Sain8g01999 1999
8 133943470 133945137 - SinAMIRv0_Chr08g0197341 Sain8g02001 2001
2 76563597 76565721 - KAI3825257.1 Smso2g02224 2224
2 76904130 76914775 + KAI3825262.1 Smso2g02229 2229
2 79028709 79033840 + KAI3825290.1 Smso2g02257 2257
2 89397176 89401091 + KAI3825386.1 Smso2g02353 2353
23 53693801 53695871 - KAI3717595.1 Smso23g01195 1195
4 64629285 64632511 + transfrag37593.t01 Soca4g03415 3415
4 64646280 64652520 + transfrag37591.t02 Soca4g03418 3418
4 64663766 64667280 - transfrag37590.t01 Soca4g03419 3419
4 64862531 64868012 - asmbl_6667.p1 Soca4g03430 3430
4 64892146 64897759 + augustus55869.t01 Soca4g03431 3431
4 64898426 64899855 - transfrag37577.t01 Soca4g03432 3432
4 64927177 64931325 + transfrag37574.t01 Soca4g03434 3434
4 64952428 64953934 - transfrag37572.t01 Soca4g03436 3436
4 64981991 64986347 + transfrag37569.t02 Soca4g03440 3440
4 64988362 64990918 - transfrag37568.t01 Soca4g03442 3442
11 90717237 90723807 - Streb.11G016590.1 Stre11g01659 1659
11 90744422 90751422 - Streb.11G016600.1 Stre11g01660 1660
11 90774433 90777256 + Streb.11G016640.1 Stre11g01664 1664
5 5957677 5960268 - >KAK1423221.1 Taer5g00692 692
5 5980354 5986200 + >KAK1423224.1 Taer5g00695 695
5 6003900 6008386 - >KAK1423227.1 Taer5g00698 698
5 6013876 6017971 - >KAK1423228.1 Taer5g00699 699
6 59115045 59117416 + TkA06G230150.1 Tako6g03056 3056
6 59192935 59196717 - TkA06G230460.1 Tako6g03058 3058
6 59227027 59229545 - TkA06G230560.2 Tako6g03063 3063
6 59862595 59863959 - TkA06G233070.1 Tako6g03071 3071
6 60055814 60059488 + TkA06G234030.1 Tako6g03075 3075
6 61087263 61090868 + TkA06G238310.2 Tako6g03098 3098
6 61093523 61095115 - TkA06G238320.1 Tako6g03099 3099
6 44394974 44395940 + TbA06G054980.1 Tamo6g02622 2622
6 44514647 44518128 - TbA06G054720.1 Tamo6g02625 2625
6 44600000 44602849 - TbA06G054630.1 Tamo6g02627 2627
6 44704600 44707062 - TbA06G054490.1 Tamo6g02630 2630
6 45065646 45067883 + TbA06G054040.1 Tamo6g02639 2639
6 45068081 45069766 - TbA06G054030.1 Tamo6g02640 2640
6 45515804 45517765 + TbA06G053510.1 Tamo6g02651 2651
6 45520969 45522471 - TbA06G053500.1 Tamo6g02652 2652
       
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